##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547112_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1233244 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45619115114284 31.0 31.0 33.0 30.0 34.0 2 31.823889676333312 31.0 31.0 34.0 30.0 34.0 3 31.955192159864552 33.0 31.0 34.0 30.0 34.0 4 35.70496187291404 37.0 35.0 37.0 33.0 37.0 5 35.64186000499495 37.0 35.0 37.0 33.0 37.0 6 35.68233536915647 37.0 35.0 37.0 33.0 37.0 7 36.00811031717973 37.0 35.0 37.0 35.0 37.0 8 34.69813597309211 37.0 35.0 37.0 33.0 37.0 9 37.0084557476055 39.0 37.0 39.0 34.0 39.0 10 36.913128302266216 39.0 37.0 39.0 32.0 39.0 11 36.84527473881892 39.0 37.0 39.0 32.0 39.0 12 36.48740881771977 39.0 35.0 39.0 32.0 39.0 13 36.38680180077908 39.0 35.0 39.0 32.0 39.0 14 37.412458524022824 40.0 35.0 41.0 32.0 41.0 15 37.60211199081447 40.0 35.0 41.0 33.0 41.0 16 37.66250068923911 40.0 35.0 41.0 33.0 41.0 17 37.5700453438249 39.0 35.0 41.0 33.0 41.0 18 37.52979702313573 39.0 36.0 41.0 33.0 41.0 19 37.47182714856103 39.0 36.0 41.0 32.0 41.0 20 37.36050124711736 39.0 35.0 41.0 32.0 41.0 21 37.2624249540237 39.0 35.0 41.0 32.0 41.0 22 37.18277080610163 39.0 35.0 41.0 32.0 41.0 23 37.11646032739669 39.0 35.0 41.0 32.0 41.0 24 36.98457482866326 39.0 35.0 41.0 32.0 41.0 25 36.8875234746733 39.0 35.0 41.0 31.0 41.0 26 36.768912721245755 38.0 35.0 41.0 31.0 41.0 27 36.65755600675941 38.0 35.0 41.0 31.0 41.0 28 36.68828796247944 38.0 35.0 41.0 31.0 41.0 29 36.649631378705266 38.0 35.0 41.0 31.0 41.0 30 36.59281456062223 38.0 35.0 41.0 31.0 41.0 31 36.49598376314825 38.0 35.0 41.0 31.0 41.0 32 36.44562471011414 38.0 35.0 41.0 30.0 41.0 33 36.35863219281829 38.0 35.0 41.0 30.0 41.0 34 36.206459548961924 38.0 35.0 41.0 30.0 41.0 35 36.103862658160104 38.0 35.0 41.0 30.0 41.0 36 35.984278861279684 38.0 35.0 41.0 30.0 41.0 37 35.961926431428004 38.0 35.0 41.0 30.0 41.0 38 35.840168693299944 38.0 35.0 41.0 29.0 41.0 39 35.757301069374755 38.0 35.0 40.0 29.0 41.0 40 35.6015127582214 38.0 35.0 40.0 28.0 41.0 41 35.51651660174304 38.0 35.0 40.0 28.0 41.0 42 35.45062453172284 38.0 34.0 40.0 28.0 41.0 43 35.355602784201665 37.0 34.0 40.0 28.0 41.0 44 35.232692800451495 37.0 34.0 40.0 27.0 41.0 45 35.10163925387028 37.0 34.0 40.0 27.0 41.0 46 35.02078258641437 37.0 34.0 40.0 27.0 41.0 47 34.944757079701986 37.0 34.0 40.0 27.0 41.0 48 34.876113729318774 36.0 34.0 40.0 27.0 41.0 49 34.79497406839198 36.0 34.0 40.0 27.0 41.0 50 34.70204598603358 36.0 34.0 40.0 26.0 41.0 51 34.339068343328655 35.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 1.0 13 8.0 14 16.0 15 31.0 16 94.0 17 222.0 18 468.0 19 881.0 20 1571.0 21 2502.0 22 3858.0 23 5632.0 24 8056.0 25 11367.0 26 15026.0 27 18330.0 28 20589.0 29 23831.0 30 28376.0 31 34828.0 32 42653.0 33 56317.0 34 93213.0 35 135486.0 36 101089.0 37 133149.0 38 187768.0 39 307623.0 40 255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.717181676943085 23.411587650132496 27.50850602151723 13.362724651407182 2 31.763057432268067 25.47598042236573 28.6776177301491 14.083344415217102 3 30.106532040699165 25.605719549416012 30.322466600283484 13.965281809601343 4 26.062644537496226 28.490387952424662 29.64725553094116 15.799711979137948 5 23.46826743126259 32.069971554696394 29.021102069014727 15.44065894502629 6 21.990376600251047 40.79995524000117 26.63098300093088 10.578685158816908 7 88.28666508817395 3.685077729954494 6.256912662863148 1.771344519008404 8 85.88576145515405 5.903049193833499 5.8202594133845365 2.3909299376279147 9 83.1297780487884 5.167428343458392 8.372390216372429 3.330403391380781 10 43.36189756447224 29.156841630691087 14.697740268754602 12.783520536082074 11 36.401636659087735 24.30549023550895 22.460599848853917 16.832273256549392 12 31.78584286645627 22.195526594899306 26.71085365102121 19.307776887623213 13 24.913885654420373 28.336484912961264 28.56239316793757 18.18723626468079 14 20.873484890256915 29.920924002062854 30.205214864211786 19.000376243468445 15 19.758863614986165 23.305201565951265 37.25945554975333 19.676479269309237 16 23.364151781804736 21.287839227273757 34.85644365591886 20.491565335002644 17 23.108646788470082 21.87774682058052 28.239829263308803 26.773777127640596 18 25.526740855824155 21.9292370366286 30.49664137834849 22.047380729198764 19 27.438771240727704 24.675327834556665 26.255955836801153 21.629945087914475 20 29.379992929217575 24.51064023015721 25.33634868687786 20.77301815374735 21 26.66974256513715 25.74283758931728 27.423364719390484 20.164055126155084 22 26.489810613309288 22.584743976050156 27.06852820690796 23.856917203732593 23 23.83469937822523 26.700798868674813 26.185085838649936 23.27941591445002 24 22.953770705553808 24.65205587864202 31.394760485354073 20.9994129304501 25 24.304355018147263 24.915588480462908 28.819276639497133 21.9607798618927 26 22.1487394222068 27.182374290894586 26.852999082095675 23.815887204802944 27 22.62666593147828 26.010019104086457 27.929104054023373 23.434210910411892 28 20.945490105769824 26.88129842918352 30.505479856378788 21.66773160866787 29 22.04867812046927 24.994972608826803 29.80813204848351 23.14821722222042 30 23.681526121351492 25.796030631407895 29.376587277132504 21.145855970108105 31 27.500072978258967 25.095033910564336 25.418895206463603 21.9859979047131 32 27.4853962395114 25.61982867948273 25.818086283006448 21.076688797999424 33 26.836457343396763 25.037137825118144 25.34867390394764 22.777730927537455 34 22.977204835377265 26.79250821410848 27.795391666207177 22.43489528430708 35 23.01491026917625 26.141785404996902 28.527120342770772 22.31618398305607 36 27.624460366318427 26.18330192565299 25.132577170454507 21.059660537574075 37 23.334392869537577 28.39713795485727 26.156218882881248 22.112250292723907 38 24.250918715193425 28.203907742506757 25.29507542708499 22.25009811521483 39 23.469564822533094 26.61671169695535 25.66929172167065 24.24443175884091 40 25.63482976604792 24.616620879566412 26.46791713561955 23.280632218766115 41 21.671299434661755 24.081771328301617 27.683897103898335 26.563032133138293 42 23.394964824479178 25.713646285730967 25.936067801667797 24.95532108812206 43 23.319472869926795 24.797201527029525 27.39117319849114 24.492152404552545 44 23.12332352721765 25.608071071093796 27.866423838267206 23.40218156342135 45 22.253747028163122 26.59960234957559 26.210952577105584 24.935698045155704 46 23.670984817278658 26.22635909844281 26.96019603582097 23.142460048457565 47 22.86862940342706 25.989179756804003 28.1388760050728 23.003314834696134 48 23.609764166701805 25.070221302515964 28.404516867708256 22.915497663073975 49 23.87151285552575 24.048201329177356 29.04040076416346 23.03988505113343 50 22.344483330143913 26.982494948282742 27.870397099033116 22.802624622540225 51 22.224393550667994 27.20491646421957 26.602278219071003 23.96841176604143 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 969.0 1 1582.5 2 2196.0 3 6394.0 4 10592.0 5 7366.5 6 4141.0 7 4240.5 8 4340.0 9 4536.5 10 4733.0 11 4840.0 12 4947.0 13 4937.5 14 4928.0 15 4769.0 16 4610.0 17 4694.5 18 4779.0 19 4527.0 20 4275.0 21 4567.5 22 4860.0 23 5537.5 24 6215.0 25 6126.5 26 7456.5 27 8875.0 28 10574.5 29 12274.0 30 14158.5 31 16043.0 32 18448.0 33 20853.0 34 23505.0 35 26157.0 36 30788.5 37 35420.0 38 38548.0 39 41676.0 40 49977.0 41 58278.0 42 66418.0 43 74558.0 44 77329.0 45 80100.0 46 83973.5 47 87847.0 48 91277.5 49 94708.0 50 93570.0 51 92432.0 52 88781.5 53 85131.0 54 80721.5 55 76312.0 56 72973.5 57 69635.0 58 65020.5 59 60406.0 60 57895.0 61 55384.0 62 50111.5 63 44839.0 64 41866.0 65 38893.0 66 33553.0 67 28213.0 68 23881.5 69 19550.0 70 16666.0 71 13782.0 72 11948.5 73 10115.0 74 8475.5 75 5270.0 76 3704.0 77 2876.5 78 2049.0 79 1453.5 80 858.0 81 625.0 82 392.0 83 278.5 84 165.0 85 128.0 86 91.0 87 61.5 88 32.0 89 18.0 90 4.0 91 4.0 92 4.0 93 4.5 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1233244.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.556853403285224 #Duplication Level Percentage of deduplicated Percentage of total 1 75.83902384205024 19.38206814579531 2 6.4441399562532435 3.29383880344434 3 2.658389945351234 2.0382024636632665 4 1.6093407414837966 1.6451874162414293 5 1.1617659959380977 1.484554162355581 6 0.9458969745103067 1.4504490187302557 7 0.7747363646238956 1.3859876587820918 8 0.6658462677797036 1.3613548363816386 9 0.5616605212010419 1.291884804247302 >10 8.52328372569524 51.601554009662735 >50 0.7704599335694587 12.219408893035396 >100 0.0425125546811736 1.9164797174766373 >500 0.002289137559741495 0.32761765699189777 >1k 3.2701965139164213E-4 0.10121045474928271 >5k 3.2701965139164213E-4 0.5002019584429868 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5985 0.4853054221224672 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.108695440642728E-5 0.0 0.0 0.0454897814220057 0.0 2 8.108695440642728E-5 0.0 0.0 0.13209064872807003 0.0 3 8.108695440642728E-5 0.0 0.0 0.21033955973027235 0.0 4 8.108695440642728E-5 0.0 0.0 0.34883607785645016 0.0 5 8.108695440642728E-5 0.0 0.0 0.573122593744628 0.0 6 8.108695440642728E-5 0.0 0.0 1.0260743210589307 0.0 7 8.108695440642728E-5 0.0 0.0 1.2361706199259839 0.0 8 8.108695440642728E-5 0.0 0.0 1.7606410410267554 0.0 9 8.108695440642728E-5 0.0 0.0 2.0242547298020503 0.0 10 8.108695440642728E-5 0.0 0.0 2.415256023949843 0.0 11 8.108695440642728E-5 0.0 0.0 2.783634057818242 0.0 12 8.108695440642728E-5 0.0 0.0 3.105873614629384 0.0 13 8.108695440642728E-5 0.0 0.0 3.2762373058372876 0.0 14 8.108695440642728E-5 0.0 0.0 3.3603244775567527 0.0 15 8.108695440642728E-5 0.0 0.0 3.443519692777747 0.0 16 8.108695440642728E-5 0.0 0.0 3.586394906441872 0.0 17 8.108695440642728E-5 0.0 0.0 3.7492985978443842 0.0 18 8.108695440642728E-5 0.0 0.0 3.9482048970033503 0.0 19 8.108695440642728E-5 0.0 0.0 4.056861415907963 0.0 20 8.108695440642728E-5 0.0 0.0 4.171923804210683 0.0 21 8.108695440642728E-5 0.0 0.0 4.327367495807804 0.0 22 8.108695440642728E-5 0.0 0.0 4.485000535173899 0.0 23 8.108695440642728E-5 0.0 0.0 4.660959226235846 0.0 24 8.108695440642728E-5 0.0 0.0 4.805131831170474 0.0 25 8.108695440642728E-5 0.0 0.0 4.927735306232992 0.0 26 8.108695440642728E-5 0.0 0.0 5.043203129307744 0.0 27 8.108695440642728E-5 0.0 0.0 5.187456821196778 0.0 28 8.108695440642728E-5 0.0 0.0 5.31792573083672 0.0 29 8.108695440642728E-5 0.0 0.0 5.464612031357947 0.0 30 8.108695440642728E-5 0.0 0.0 5.662139852292004 0.0 31 8.108695440642728E-5 0.0 0.0 5.810934413627798 0.0 32 8.108695440642728E-5 0.0 0.0 5.988028322051435 0.0 33 8.108695440642728E-5 0.0 0.0 6.146066796189562 0.0 34 8.108695440642728E-5 0.0 0.0 6.31270048749477 0.0 35 8.108695440642728E-5 0.0 0.0 6.505930699845286 0.0 36 1.6217390881285456E-4 0.0 0.0 6.668591130384579 0.0 37 1.6217390881285456E-4 0.0 0.0 6.840414386771799 0.0 38 1.6217390881285456E-4 0.0 0.0 7.048807859596317 0.0 39 1.6217390881285456E-4 0.0 0.0 7.404130893805281 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCGA 60 0.0 45.000004 14 TATGCGT 25 3.890972E-5 45.0 11 ACGATAC 20 7.033487E-4 45.0 45 TAACACG 25 3.890972E-5 45.0 21 CTGTACG 90 0.0 40.0 1 AATACGG 45 1.9284926E-8 40.0 2 GCGTAAG 175 0.0 39.857143 1 ACGGGAT 255 0.0 39.705883 5 CGTTTTT 3940 0.0 39.689087 1 CGGTCTA 120 0.0 39.375004 31 GGCGATT 745 0.0 38.65772 8 ACGTAGG 135 0.0 38.333332 2 TGTAGCG 60 1.5643309E-10 37.500004 1 TAAGGGC 565 0.0 37.433628 4 AGGGATC 675 0.0 37.333332 6 TTACACG 915 0.0 37.13115 34 TAAGGGA 1225 0.0 37.102043 4 CGACGGG 170 0.0 37.058823 3 ACACGCG 910 0.0 36.84066 36 ATCACGG 110 0.0 36.81818 2 >>END_MODULE