##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547110_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1154651 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47091805229459 31.0 31.0 33.0 30.0 34.0 2 31.84456169006912 31.0 31.0 34.0 30.0 34.0 3 31.91950727968884 33.0 31.0 34.0 30.0 34.0 4 35.696193914871245 37.0 35.0 37.0 33.0 37.0 5 35.65037920549153 37.0 35.0 37.0 33.0 37.0 6 35.70589381553387 37.0 35.0 37.0 33.0 37.0 7 36.0750434546889 37.0 35.0 37.0 35.0 37.0 8 34.76830228354715 37.0 35.0 37.0 35.0 37.0 9 37.08052303250073 39.0 37.0 39.0 34.0 39.0 10 36.7915300813839 39.0 37.0 39.0 32.0 39.0 11 36.868664211090625 39.0 37.0 39.0 33.0 39.0 12 36.79873139156334 39.0 35.0 39.0 33.0 39.0 13 36.80413648799507 39.0 35.0 39.0 33.0 39.0 14 37.94750881435169 40.0 37.0 41.0 33.0 41.0 15 38.04940107443721 40.0 37.0 41.0 33.0 41.0 16 38.0424812345895 40.0 37.0 41.0 33.0 41.0 17 37.960891213015884 40.0 36.0 41.0 33.0 41.0 18 37.86494966877437 39.0 36.0 41.0 33.0 41.0 19 37.777100613085686 39.0 36.0 41.0 33.0 41.0 20 37.6363870987857 39.0 35.0 41.0 33.0 41.0 21 37.565628055576965 39.0 35.0 41.0 33.0 41.0 22 37.474682826239274 39.0 35.0 41.0 32.0 41.0 23 37.38173439420223 39.0 35.0 41.0 32.0 41.0 24 37.26282660301684 39.0 35.0 41.0 32.0 41.0 25 37.190268747872736 39.0 35.0 41.0 32.0 41.0 26 37.10164976256895 39.0 35.0 41.0 32.0 41.0 27 37.01180616480651 39.0 35.0 41.0 32.0 41.0 28 37.02239204746716 39.0 35.0 41.0 32.0 41.0 29 36.988301226950824 39.0 35.0 41.0 31.0 41.0 30 36.927593705803744 39.0 35.0 41.0 31.0 41.0 31 36.81661471734749 39.0 35.0 41.0 31.0 41.0 32 36.68996952325854 39.0 35.0 41.0 31.0 41.0 33 36.47950592863125 39.0 35.0 41.0 30.0 41.0 34 36.26420970492383 39.0 35.0 41.0 30.0 41.0 35 36.10714839375707 39.0 35.0 41.0 29.0 41.0 36 35.98600702723161 39.0 35.0 41.0 28.0 41.0 37 35.95114541103762 39.0 35.0 41.0 28.0 41.0 38 35.86553512706437 39.0 35.0 41.0 27.0 41.0 39 35.79624319383086 39.0 35.0 41.0 27.0 41.0 40 35.69462893982684 39.0 35.0 41.0 27.0 41.0 41 35.6181928565428 39.0 35.0 41.0 26.0 41.0 42 35.56852243664969 39.0 35.0 41.0 26.0 41.0 43 35.49727406809504 39.0 35.0 41.0 26.0 41.0 44 35.41030493196646 38.0 35.0 41.0 26.0 41.0 45 35.28972564004188 38.0 35.0 40.0 25.0 41.0 46 35.22139676837417 38.0 34.0 40.0 24.0 41.0 47 35.159805863416736 38.0 34.0 40.0 24.0 41.0 48 35.078594311181476 38.0 34.0 40.0 24.0 41.0 49 35.01737321493681 38.0 34.0 40.0 24.0 41.0 50 34.929976243904 38.0 34.0 40.0 24.0 41.0 51 34.582455651101505 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 4.0 13 2.0 14 2.0 15 18.0 16 73.0 17 149.0 18 380.0 19 794.0 20 1417.0 21 2235.0 22 3599.0 23 5373.0 24 8279.0 25 12957.0 26 18191.0 27 20462.0 28 20731.0 29 21701.0 30 23957.0 31 29074.0 32 35616.0 33 45857.0 34 69385.0 35 100043.0 36 87774.0 37 116460.0 38 181438.0 39 348469.0 40 209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.82342456725019 23.562444409609483 27.459985744610275 16.15414527853005 2 34.04838345093019 24.879898774608087 27.983174136600585 13.08854363786114 3 28.817192381074452 25.266335888506568 32.939823375201684 12.976648355217291 4 24.347010481955152 28.34908556784691 32.78843563986001 14.515468310337928 5 21.985431095629764 32.309762863410675 31.889202884681172 13.815603156278392 6 20.681920337833684 40.98164726830878 28.33167771040773 10.004754683449804 7 87.30542822030206 2.9606348584983686 8.525260013631824 1.2086769075677413 8 85.07471088666618 5.218719769003794 7.9617131063845274 1.7448562379454917 9 82.06592294987836 4.1973721929829875 10.877312711806425 2.859392145332226 10 31.64843749323389 26.864654341441703 26.989540562472992 14.497367602851424 11 29.048084659347285 25.641600795391856 27.300716839980222 18.009597705280644 12 26.743578795670725 24.639999445719962 29.66143016374645 18.954991594862864 13 23.690448455853762 27.181286813071655 31.14863279034098 17.979631940733608 14 21.49575932467906 28.997679818404006 31.237923840190675 18.268637016726267 15 21.13625675637054 25.41685756128908 35.96688523198785 17.48000045035253 16 22.527846076433487 24.125038648041702 35.26632722788098 18.080788047643832 17 22.291151179014264 24.163751644436285 31.725776879767132 21.81932029678232 18 23.292146284894745 24.612631868850414 32.69732585863607 19.397895987618767 19 24.90449495128831 26.917137732526967 29.482068607743813 18.696298708440906 20 26.264126562918143 26.1676471938274 28.962084647222408 18.606141596032046 21 24.649006496335257 26.627786231510647 30.706074822608738 18.01713244954536 22 23.82910507157574 24.568462678333105 30.38363973183239 21.218792518258763 23 21.81247840256493 27.656235520516585 30.15066890341757 20.380617173500912 24 20.971618263873673 26.620424699757763 33.67987383200638 18.728083204362182 25 21.50545922534168 27.18137341932757 31.4991283080342 19.814039047296543 26 20.482812555482134 29.11511790142649 30.194578275167128 20.207491267924247 27 20.685384588070335 27.754100589701995 31.12611516380274 20.434399658424926 28 19.73219613545565 28.32847327893883 32.760721637966796 19.178608947638722 29 20.407205294067214 25.979538405977216 32.81277199777249 20.800484302183083 30 21.374856991419918 26.818926238317896 32.22211733242339 19.58409943783879 31 22.903197589574688 27.218267684347914 29.849192526572963 20.029342199504438 32 23.344196644700432 27.23810051695274 29.875087797091936 19.54261504125489 33 22.461332471889776 27.403691678264686 29.178860105780878 20.956115744064657 34 20.34346308971282 28.620163148864897 30.072376848069243 20.96399691335304 35 20.92450446065521 28.484018114564485 29.671303276920906 20.920174147859395 36 22.836164347495476 29.14179262824871 27.75210864581592 20.269934378439892 37 21.60167877566468 29.581405983279797 28.551744206691026 20.265171034364496 38 21.41582175046832 29.840531900981336 28.272092606337324 20.471553742213015 39 21.38013997303081 28.916269937842692 28.09403014417343 21.609559944953062 40 22.424871238149017 27.60184679180116 28.759685827146036 21.213596142903786 41 20.147126707550594 27.575691702514437 29.192024256680156 23.08515733325481 42 21.608174244858404 28.254598142642234 27.938225489780027 22.19900212271933 43 21.34558407692021 27.79489213623857 28.65489225748733 22.20463152935389 44 21.419545819472724 29.14577651602086 28.654719044975497 20.779958619530923 45 20.752850861429124 29.052934609678594 28.29331113903682 21.900903389855465 46 22.02466372955984 28.950219590161876 28.19198181961476 20.833134860663524 47 21.699370632338255 28.037995896595596 28.988759374044626 21.273874097021526 48 21.666027223810485 27.55975615142584 29.395375745571606 21.37884087919207 49 21.568508579648743 27.19704915164842 29.289196475818237 21.945245792884606 50 21.011976779130663 28.593055390763094 29.04886411565053 21.34610371445571 51 20.579638349596543 28.636964762512658 28.67238672118242 22.111010166708382 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 678.0 1 892.0 2 1106.0 3 8466.0 4 15826.0 5 11353.0 6 6880.0 7 6919.5 8 6959.0 9 7156.5 10 7354.0 11 7713.5 12 8073.0 13 7879.0 14 7685.0 15 7552.0 16 7419.0 17 7153.5 18 6888.0 19 6648.0 20 6408.0 21 6311.0 22 6214.0 23 6464.0 24 6714.0 25 7581.0 26 10100.0 27 11752.0 28 14250.0 29 16748.0 30 18869.0 31 20990.0 32 24121.5 33 27253.0 34 31651.0 35 36049.0 36 40086.0 37 44123.0 38 48742.5 39 53362.0 40 60620.0 41 67878.0 42 73351.0 43 78824.0 44 82646.5 45 86469.0 46 90542.0 47 94615.0 48 96347.5 49 98080.0 50 94022.0 51 89964.0 52 84557.0 53 79150.0 54 71716.5 55 64283.0 56 57722.5 57 51162.0 58 46113.0 59 41064.0 60 36417.0 61 31770.0 62 27488.0 63 23206.0 64 19273.0 65 15340.0 66 12359.5 67 9379.0 68 7816.0 69 6253.0 70 5056.0 71 3859.0 72 3162.5 73 2466.0 74 2177.0 75 1568.5 76 1249.0 77 854.5 78 460.0 79 320.0 80 180.0 81 146.0 82 112.0 83 73.5 84 35.0 85 28.0 86 21.0 87 16.5 88 12.0 89 6.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1154651.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.598674540319443 #Duplication Level Percentage of deduplicated Percentage of total 1 72.47308031544115 22.900532778220565 2 6.860043106421751 4.3353653890476584 3 3.549009136136333 3.3643195390017673 4 2.375854023886955 3.002953522244489 5 1.7805472862580412 2.8131467101058427 6 1.4855396358167154 2.8164650081350238 7 1.2316263125584235 2.724243130407916 8 1.0408460642384265 2.6311484824353975 9 0.9154433758040851 2.6034117562912162 >10 8.173905319279157 49.19885010407898 >50 0.0984062833569267 1.9019241680465622 >100 0.0151384572038714 0.8694548345479237 >500 2.803417990757419E-4 0.06475511795669699 >1k 0.0 0.0 >5k 2.803417990757419E-4 0.7734294594800566 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8731 0.7561592204051268 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03204431468902725 0.0 2 0.0 0.0 0.0 0.09890434425640302 0.0 3 0.0 0.0 0.0 0.17615712453373358 0.0 4 0.0 0.0 0.0 0.2953273326745484 0.0 5 0.0 0.0 0.0 0.4943485087701825 0.0 6 0.0 0.0 0.0 0.9862720423747089 0.0 7 0.0 0.0 0.0 1.2369105469964516 0.0 8 0.0 0.0 0.0 1.8290375186961254 0.0 9 0.0 0.0 0.0 2.155543103500538 0.0 10 0.0 0.0 0.0 2.608407215686818 0.0 11 0.0 0.0 0.0 2.921575437080122 0.0 12 0.0 0.0 0.0 3.199841337339161 0.0 13 0.0 0.0 0.0 3.3654324986511077 0.0 14 0.0 0.0 0.0 3.463557386604264 0.0 15 0.0 0.0 0.0 3.546093148492488 0.0 16 0.0 0.0 0.0 3.6788605388121605 0.0 17 0.0 0.0 0.0 3.825744748846188 0.0 18 0.0 0.0 0.0 4.022167737264334 0.0 19 0.0 0.0 0.0 4.12964610085645 0.0 20 0.0 0.0 0.0 4.250375221603758 0.0 21 0.0 0.0 0.0 4.397346037893701 0.0 22 0.0 0.0 0.0 4.557221186315172 0.0 23 0.0 0.0 0.0 4.736582742317808 0.0 24 0.0 0.0 0.0 4.88502586495833 0.0 25 0.0 0.0 0.0 5.014069186273601 0.0 26 0.0 0.0 0.0 5.130294781713262 0.0 27 0.0 0.0 0.0 5.266006784734088 0.0 28 0.0 0.0 0.0 5.412544569744451 0.0 29 0.0 0.0 0.0 5.562113573711883 0.0 30 0.0 0.0 0.0 5.750222361562065 0.0 31 0.0 0.0 0.0 5.915640310362178 0.0 32 0.0 0.0 0.0 6.077940433949306 0.0 33 0.0 0.0 0.0 6.239894132512768 0.0 34 0.0 0.0 0.0 6.40955578785278 0.0 35 0.0 0.0 0.0 6.5929012316275655 0.0 36 0.0 0.0 0.0 6.77113690630329 0.0 37 0.0 0.0 0.0 6.943483355576706 0.0 38 0.0 0.0 0.0 7.138520643900192 0.0 39 0.0 0.0 0.0 7.377467303973235 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTAA 20 7.0333004E-4 45.0 31 TAATGCG 40 6.8157533E-9 45.0 1 CGTTTTT 6885 0.0 43.104576 1 GTCAACG 45 1.9283107E-8 40.0 1 CGGGTAT 125 0.0 39.600002 6 CTAAGCG 80 0.0 39.375 1 GCCGATA 75 0.0 39.0 9 CTAACGG 70 0.0 38.571426 2 AGGGCGA 1455 0.0 38.505154 6 TAGGGTC 900 0.0 38.250004 5 GGGCGAT 2885 0.0 37.902946 7 TTAACGG 85 0.0 37.058823 2 TAGTGCG 85 0.0 37.058823 1 GCGATGT 390 0.0 36.923077 9 CGAATAT 80 0.0 36.5625 14 TAGGGCG 610 0.0 36.516396 5 GGCGATT 790 0.0 36.455696 8 ATAGGGT 1010 0.0 36.311882 4 TGGGCGA 880 0.0 36.051136 6 TGTAGCG 125 0.0 36.000004 1 >>END_MODULE