##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547109_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1218741 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.506250302566336 31.0 31.0 33.0 30.0 34.0 2 31.87666698666903 31.0 31.0 34.0 30.0 34.0 3 31.97042521749904 33.0 31.0 34.0 30.0 34.0 4 35.725966386623575 37.0 35.0 37.0 33.0 37.0 5 35.676553098648526 37.0 35.0 37.0 33.0 37.0 6 35.72549458826773 37.0 35.0 37.0 33.0 37.0 7 36.05356347246872 37.0 35.0 37.0 35.0 37.0 8 34.73446942377421 37.0 35.0 37.0 33.0 37.0 9 37.046800755861995 39.0 37.0 39.0 34.0 39.0 10 36.97338729065486 39.0 37.0 39.0 32.0 39.0 11 36.914821114576434 39.0 37.0 39.0 33.0 39.0 12 36.67925670835723 39.0 35.0 39.0 32.0 39.0 13 36.643037363968226 39.0 35.0 39.0 33.0 39.0 14 37.76324830296183 40.0 36.0 41.0 33.0 41.0 15 37.89623554143169 40.0 36.0 41.0 33.0 41.0 16 37.90733470031779 40.0 36.0 41.0 33.0 41.0 17 37.792421851730595 40.0 36.0 41.0 33.0 41.0 18 37.71590682515809 39.0 36.0 41.0 33.0 41.0 19 37.65958476821572 39.0 36.0 41.0 33.0 41.0 20 37.54870230836576 39.0 35.0 41.0 33.0 41.0 21 37.454784896873086 39.0 35.0 41.0 32.0 41.0 22 37.35276486144308 39.0 35.0 41.0 32.0 41.0 23 37.251692525319164 39.0 35.0 41.0 32.0 41.0 24 37.1146494620268 39.0 35.0 41.0 32.0 41.0 25 36.99626335702171 39.0 35.0 41.0 31.0 41.0 26 36.90665366964761 39.0 35.0 41.0 31.0 41.0 27 36.81538325206094 39.0 35.0 41.0 31.0 41.0 28 36.83675284576461 39.0 35.0 41.0 31.0 41.0 29 36.77080938443853 39.0 35.0 41.0 31.0 41.0 30 36.704297303528804 39.0 35.0 41.0 31.0 41.0 31 36.62005873274141 39.0 35.0 41.0 31.0 41.0 32 36.52275586035097 39.0 35.0 41.0 30.0 41.0 33 36.397523345813426 39.0 35.0 41.0 30.0 41.0 34 36.22687593180175 39.0 35.0 41.0 30.0 41.0 35 36.09478552046743 39.0 35.0 41.0 30.0 41.0 36 35.96146268977576 38.0 35.0 41.0 29.0 41.0 37 35.92886101312748 38.0 35.0 41.0 29.0 41.0 38 35.80189884479147 38.0 35.0 41.0 29.0 41.0 39 35.71264854468669 38.0 35.0 41.0 28.0 41.0 40 35.566906340231434 38.0 35.0 40.0 28.0 41.0 41 35.45900482547153 38.0 35.0 40.0 27.0 41.0 42 35.380892248640194 38.0 35.0 40.0 27.0 41.0 43 35.27829784999438 38.0 34.0 40.0 27.0 41.0 44 35.14435306599187 38.0 34.0 40.0 26.0 41.0 45 35.02232713923631 37.0 34.0 40.0 26.0 41.0 46 34.947362893346494 37.0 34.0 40.0 26.0 41.0 47 34.86740825163017 37.0 34.0 40.0 26.0 41.0 48 34.782978499943795 37.0 34.0 40.0 26.0 41.0 49 34.69530031401258 36.0 34.0 40.0 26.0 41.0 50 34.5957442967784 36.0 34.0 40.0 26.0 41.0 51 34.23137893941371 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 1.0 12 4.0 13 13.0 14 16.0 15 27.0 16 89.0 17 201.0 18 435.0 19 853.0 20 1555.0 21 2460.0 22 3878.0 23 5689.0 24 8405.0 25 12300.0 26 16234.0 27 18936.0 28 20586.0 29 22985.0 30 26793.0 31 32717.0 32 40195.0 33 52821.0 34 85670.0 35 119756.0 36 102332.0 37 135473.0 38 193867.0 39 314214.0 40 232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.49626951091331 23.105073186181478 26.148459762984917 14.250197539920295 2 34.659455946751606 24.667094977521884 27.030927818133634 13.642521257592877 3 30.713170394694195 25.278463594808088 30.528635698643107 13.47973031185461 4 26.788218333509743 28.208864721872818 29.47476124951897 15.528155695098466 5 23.37108540698967 31.742593381202404 29.173466716882423 15.712854494925502 6 22.055793642783826 40.89810714499635 26.86764456106753 10.178454651152295 7 87.11375099385349 3.6572988026167987 7.459173031841876 1.7697771716878319 8 84.0911235447072 6.224045962185567 7.133673192253317 2.551157300853914 9 81.50255058293764 5.2134128580231565 9.724297451222204 3.559739107817001 10 40.91632266412634 28.869546523830742 16.082005938915653 14.13212487312727 11 32.7811241272756 27.00385069510257 23.486368309591622 16.728656868030207 12 28.452394725376433 23.705118642927413 29.10454313098517 18.73794350071098 13 23.694041638051072 27.091235955793724 30.926423251535805 18.2882991546194 14 21.328239552127975 28.679760506949386 31.222138255790195 18.769861685132444 15 21.091355751550164 23.963335934378183 35.65170942800808 19.293598886063567 16 24.032997987267187 22.437088766193966 33.77624942461114 19.75366382192771 17 23.697241661682014 23.303146443748098 29.25223652933642 23.747375365233466 18 25.470875272104575 23.013257123539784 30.457496711770588 21.058370892585053 19 27.933908845275575 25.11797010193306 26.623129934908235 20.324991117883126 20 28.994347445437548 24.87066571158269 26.351948445157745 19.783038397822015 21 27.92028823187207 25.13314970120805 27.3521609595476 19.59440110737228 22 26.461077456161732 23.284520665178245 27.14563635751977 23.10876552114026 23 24.346354147435754 26.820792933034994 26.71100750692723 22.12184541260202 24 23.56456375882981 24.92350712743725 31.040065116378297 20.471863997354646 25 23.792996214946406 25.387592605812063 29.194143792651595 21.625267386589933 26 22.137189115652955 26.926886024183972 27.99692469523877 22.939000164924295 27 22.732229407232545 25.681256312867127 28.852725886796293 22.73378839310403 28 22.13390704013404 26.617058095198242 30.21462312337076 21.03441174129696 29 22.903799904983913 25.134708687079538 30.013924205389003 21.947567202547546 30 23.726862393240236 25.587717160578006 29.839317787782637 20.84610265839912 31 26.276706863886584 25.536762938146822 27.07761534239022 21.10891485557637 32 26.207783277989332 25.71727709168724 27.046845884400376 21.028093745923044 33 25.436331427267977 25.567204188584775 26.20368068359069 22.79278370055656 34 22.83364554076707 26.72585889865033 28.555123689118524 21.885371871464077 35 23.521568569532 26.70854595028804 28.016042785136463 21.75384269504349 36 25.859801221096195 27.56204968898232 25.57540937738207 21.002739712539416 37 24.026351784341383 27.683814690734128 25.99379195415597 22.296041570768523 38 23.91156119306727 28.882756877794378 25.731307964530608 21.474373964607736 39 24.40731870019963 26.816444182972425 25.348864114688848 23.427373002139092 40 25.1499703382425 25.655574071931607 26.986373642964338 22.208081946861558 41 22.36964211428023 25.75321581861938 27.61226544442174 24.26487662267865 42 24.57150452803344 26.41947714895946 25.83362666883284 23.175391654174266 43 23.620687250203286 25.46070083799593 27.562706104086104 23.355905807714684 44 23.145524766952125 26.59260663258231 27.673065893409678 22.588802707055887 45 22.453909403228415 27.252960226988343 26.691479157589676 23.601651212193566 46 23.73285218106226 26.362533138706258 27.299729803132905 22.60488487709858 47 22.87130735734664 26.34940483663059 28.389132719749316 22.39015508627346 48 23.63717967968584 25.932253038176285 28.231511042953343 22.199056239184536 49 23.482840078408785 25.62185074597474 28.22749050044267 22.667818675173805 50 22.298421075519737 27.019194398153505 28.397830219874443 22.284554306452314 51 22.347077845087675 27.27092959045441 27.00179939790325 23.380193166554665 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 965.0 1 1516.0 2 2067.0 3 7629.0 4 13191.0 5 9283.0 6 5375.0 7 5512.5 8 5650.0 9 5830.0 10 6010.0 11 6210.5 12 6411.0 13 6449.0 14 6487.0 15 6392.0 16 6297.0 17 6076.0 18 5855.0 19 5825.5 20 5796.0 21 5899.5 22 6003.0 23 6256.5 24 6510.0 25 6784.5 26 8723.5 27 10388.0 28 12383.0 29 14378.0 30 16108.0 31 17838.0 32 20602.0 33 23366.0 34 26289.5 35 29213.0 36 32647.5 37 36082.0 38 38882.0 39 41682.0 40 48280.0 41 54878.0 42 61795.0 43 68712.0 44 71352.5 45 73993.0 46 79587.5 47 85182.0 48 88440.0 49 91698.0 50 90177.5 51 88657.0 52 85856.0 53 83055.0 54 76844.5 55 70634.0 56 67389.0 57 64144.0 58 62544.0 59 60944.0 60 56863.5 61 52783.0 62 48952.5 63 45122.0 64 40904.5 65 36687.0 66 32066.0 67 27445.0 68 23747.0 69 20049.0 70 16841.0 71 13633.0 72 11806.0 73 9979.0 74 8419.0 75 5474.0 76 4089.0 77 2893.0 78 1697.0 79 1375.0 80 1053.0 81 752.0 82 451.0 83 342.0 84 233.0 85 150.0 86 67.0 87 49.0 88 31.0 89 28.0 90 25.0 91 17.5 92 10.0 93 8.0 94 6.0 95 3.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1218741.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.56526570036445 #Duplication Level Percentage of deduplicated Percentage of total 1 74.11932871066166 20.4311898944204 2 6.057628671095418 3.339602876657816 3 2.830229255068544 2.340480642267269 4 1.910754690249842 2.106818428998179 5 1.3851506068715636 1.9091022256717856 6 1.1751375544534566 1.9435787353791616 7 0.9606297690188201 1.8536010375878451 8 0.8576109213387442 1.891221833138947 9 0.7631805966855347 1.8933548332499501 >10 9.693043990831967 56.308801130920706 >50 0.21792289996627381 3.6880320660538093 >100 0.02754593789863778 1.4345917660231267 >500 0.0015303298828427195 0.24205150412320398 >1k 0.0 0.0 >5k 3.0606597656854386E-4 0.6175730255077913 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7320 0.6006198199617474 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.205188797291631E-5 0.0 0.0 0.027487382470926965 0.0 2 8.205188797291631E-5 0.0 0.0 0.09280068529736835 0.0 3 8.205188797291631E-5 0.0 0.0 0.1524524078536785 0.0 4 8.205188797291631E-5 0.0 0.0 0.26084295186590095 0.0 5 8.205188797291631E-5 0.0 0.0 0.441193001630371 0.0 6 8.205188797291631E-5 0.0 0.0 0.9326017587001668 0.0 7 8.205188797291631E-5 0.0 0.0 1.159803436497172 0.0 8 8.205188797291631E-5 0.0 0.0 1.7430282562086612 0.0 9 8.205188797291631E-5 0.0 0.0 2.047030501148316 0.0 10 8.205188797291631E-5 0.0 0.0 2.477392653566262 0.0 11 8.205188797291631E-5 0.0 0.0 2.7831179881533483 0.0 12 8.205188797291631E-5 0.0 0.0 3.056104619439241 0.0 13 8.205188797291631E-5 0.0 0.0 3.218649409513588 0.0 14 8.205188797291631E-5 0.0 0.0 3.3040654248933943 0.0 15 8.205188797291631E-5 0.0 0.0 3.382424977907529 0.0 16 8.205188797291631E-5 0.0 0.0 3.495492479534208 0.0 17 8.205188797291631E-5 0.0 0.0 3.608970240600751 0.0 18 8.205188797291631E-5 0.0 0.0 3.774879158081988 0.0 19 8.205188797291631E-5 0.0 0.0 3.8644798197484125 0.0 20 8.205188797291631E-5 0.0 0.0 3.9661421089468556 0.0 21 8.205188797291631E-5 0.0 0.0 4.090368667337851 0.0 22 8.205188797291631E-5 0.0 0.0 4.21722088614398 0.0 23 8.205188797291631E-5 0.0 0.0 4.366391218478742 0.0 24 8.205188797291631E-5 0.0 0.0 4.4862690268071725 0.0 25 8.205188797291631E-5 0.0 0.0 4.597367283122501 0.0 26 8.205188797291631E-5 0.0 0.0 4.704855256367021 0.0 27 8.205188797291631E-5 0.0 0.0 4.8140663192589725 0.0 28 8.205188797291631E-5 0.0 0.0 4.922456863271195 0.0 29 8.205188797291631E-5 0.0 0.0 5.044385968798949 0.0 30 8.205188797291631E-5 0.0 0.0 5.20504356544992 0.0 31 8.205188797291631E-5 0.0 0.0 5.330336798384563 0.0 32 8.205188797291631E-5 0.0 0.0 5.480902012814864 0.0 33 8.205188797291631E-5 0.0 0.0 5.62145689691247 0.0 34 8.205188797291631E-5 0.0 0.0 5.757006615843728 0.0 35 8.205188797291631E-5 0.0 0.0 5.902976924547545 0.0 36 8.205188797291631E-5 0.0 0.0 6.0356548273997515 0.0 37 8.205188797291631E-5 0.0 0.0 6.174322518073979 0.0 38 8.205188797291631E-5 0.0 0.0 6.338180138355893 0.0 39 8.205188797291631E-5 0.0 0.0 6.581135778643699 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATTG 35 1.2120108E-7 45.000004 1 CTATACG 20 7.033454E-4 45.0 1 CGGTCTA 95 0.0 42.63158 31 AGGGCGA 1525 0.0 39.098362 6 CGTTTTT 5020 0.0 38.90438 1 GGGCGAT 3050 0.0 37.69672 7 TAGTACG 30 1.1399625E-4 37.499996 1 TTACACG 720 0.0 36.875 34 TCACGAC 110 0.0 36.81818 25 CTCACGA 110 0.0 36.81818 24 CACGACG 110 0.0 36.81818 26 TCAAGCG 850 0.0 36.794117 17 GGCGATT 710 0.0 36.443665 8 ATACTAT 555 0.0 36.08108 45 CGTATAA 25 0.0021071585 36.0 26 GCGAATA 25 0.0021071585 36.0 25 TTATGCG 50 4.879439E-8 36.0 1 CATAGCG 50 4.879439E-8 36.0 1 ACTAACG 25 0.0021071585 36.0 1 TATAGCG 50 4.879439E-8 36.0 1 >>END_MODULE