SRR1547108_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547108_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	954048
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4407	0.4619264439525056	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1545	0.16194153753270277	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTTA	20	7.0326845E-4	45.0	15
CGGGTAC	85	0.0	45.0	6
GACCGTA	25	3.890306E-5	45.0	9
GTTAGCG	20	7.0326845E-4	45.0	1
CTCGGTT	20	7.0326845E-4	45.0	19
CTACGTT	20	7.0326845E-4	45.0	30
TGATTCG	55	1.8189894E-12	45.0	15
TGTTACG	35	1.2116288E-7	45.0	1
GCTAGCG	25	3.890306E-5	45.0	1
CCGACGG	20	7.0326845E-4	45.0	2
CGTAACA	20	7.0326845E-4	45.0	33
CCGAAAC	25	3.890306E-5	45.0	44
ACCAACG	20	7.0326845E-4	45.0	21
GCTCGTC	25	3.890306E-5	45.0	9
TCGGTCA	20	7.0326845E-4	45.0	22
GCGTAAC	70	0.0	45.0	32
TCGCGAG	20	7.0326845E-4	45.0	1
ACGCGTA	20	7.0326845E-4	45.0	23
AATACGG	100	0.0	42.75	2
CGCATCG	75	0.0	42.000004	21