##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547108_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 954048 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.478164620648016 31.0 31.0 33.0 30.0 34.0 2 31.848305326356744 31.0 31.0 34.0 30.0 34.0 3 31.951807456228618 33.0 31.0 34.0 30.0 34.0 4 35.67644290434024 37.0 35.0 37.0 33.0 37.0 5 35.60034820050983 37.0 35.0 37.0 33.0 37.0 6 35.656296119272824 37.0 35.0 37.0 33.0 37.0 7 36.0408753018716 37.0 35.0 37.0 35.0 37.0 8 34.73557619742403 37.0 35.0 37.0 33.0 37.0 9 37.078415341785735 39.0 37.0 39.0 34.0 39.0 10 36.898828989736366 39.0 37.0 39.0 32.0 39.0 11 36.855841634802445 39.0 37.0 39.0 33.0 39.0 12 36.372677265714096 38.0 35.0 39.0 32.0 39.0 13 36.149241966861204 38.0 35.0 39.0 32.0 39.0 14 37.24047846649225 39.0 35.0 41.0 32.0 41.0 15 37.48130597202656 39.0 35.0 41.0 33.0 41.0 16 37.58805007714496 39.0 35.0 41.0 33.0 41.0 17 37.506781629435835 39.0 35.0 41.0 33.0 41.0 18 37.47525596196418 39.0 35.0 41.0 33.0 41.0 19 37.41093005802643 39.0 35.0 41.0 33.0 41.0 20 37.27056814751459 39.0 35.0 41.0 32.0 41.0 21 37.164852292547124 39.0 35.0 41.0 32.0 41.0 22 37.07416922418998 39.0 35.0 41.0 32.0 41.0 23 37.043344779298316 39.0 35.0 41.0 32.0 41.0 24 36.9119048517475 38.0 35.0 41.0 32.0 41.0 25 36.83563824880928 38.0 35.0 41.0 32.0 41.0 26 36.72468576004562 38.0 35.0 41.0 32.0 41.0 27 36.63117578989736 38.0 35.0 41.0 31.0 41.0 28 36.67055221540216 38.0 35.0 41.0 31.0 41.0 29 36.66782279298316 38.0 35.0 41.0 31.0 41.0 30 36.62934464513316 38.0 35.0 41.0 31.0 41.0 31 36.533003580532636 38.0 35.0 41.0 31.0 41.0 32 36.43031377876166 38.0 35.0 41.0 31.0 41.0 33 36.30411153317233 38.0 35.0 41.0 30.0 41.0 34 36.1959335379352 38.0 35.0 41.0 30.0 41.0 35 36.07308227678272 38.0 35.0 41.0 30.0 41.0 36 35.918456932984505 38.0 35.0 41.0 30.0 41.0 37 35.863744801100154 38.0 35.0 41.0 30.0 41.0 38 35.815744071577114 38.0 35.0 41.0 30.0 41.0 39 35.761399845710066 38.0 35.0 41.0 29.0 41.0 40 35.61582331287315 38.0 35.0 41.0 29.0 41.0 41 35.563325954249684 38.0 35.0 40.0 29.0 41.0 42 35.51126672871805 38.0 35.0 40.0 28.0 41.0 43 35.44743555879788 38.0 35.0 40.0 28.0 41.0 44 35.342820277386465 38.0 34.0 40.0 28.0 41.0 45 35.23038358657007 38.0 34.0 40.0 27.0 41.0 46 35.18977137418663 37.0 34.0 40.0 27.0 41.0 47 35.13764611424163 37.0 34.0 40.0 27.0 41.0 48 35.09349424766888 37.0 34.0 40.0 27.0 41.0 49 35.055073748909905 37.0 34.0 40.0 27.0 41.0 50 34.9373532568592 37.0 34.0 40.0 27.0 41.0 51 34.58640340947206 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 5.0 13 3.0 14 7.0 15 23.0 16 65.0 17 171.0 18 367.0 19 699.0 20 1116.0 21 1924.0 22 2849.0 23 4265.0 24 6439.0 25 9589.0 26 12557.0 27 14416.0 28 15643.0 29 17506.0 30 20904.0 31 25353.0 32 32590.0 33 41889.0 34 73520.0 35 130195.0 36 66713.0 37 84496.0 38 129793.0 39 260706.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.65899409673308 25.108485107667537 29.61423324612598 13.6182875494734 2 30.107499832293556 27.456060910981417 29.74032753069028 12.696111726034747 3 28.07542178171329 25.67596179647146 31.92103541960153 14.327581002213725 4 24.748440330046286 28.983657006775342 31.55438720064399 14.71351546253438 5 22.347722546454683 32.76700962635004 30.61082880525927 14.274439021936002 6 20.157895619507613 40.859579392231836 28.275306902797343 10.707218085463206 7 87.96894915140538 3.9144780975380695 6.56004729321795 1.5565254578385992 8 86.16023512443817 5.848552693365533 5.438720064399275 2.552492117797008 9 84.41095206949754 4.514133460790233 8.12380509156772 2.951109378144496 10 41.77200727845978 25.475971858858255 16.991388273965253 15.76063258871671 11 37.135657744683705 25.28478650969343 22.706614342255314 14.872941403367545 12 34.073652478701284 23.07504444220836 26.410201583148858 16.441101495941503 13 19.853718051921916 38.35352099684712 26.507471322197624 15.285289629033342 14 16.126966358086804 38.96952773864628 28.066512376735766 16.83699352653116 15 14.54538974978198 25.6941998725431 43.4898453746562 16.270565003018717 16 15.792496813577515 21.04558680485678 42.94228382639029 20.21963255517542 17 15.920792245253907 23.06299054135641 29.40229422418998 31.613922989199704 18 19.702991883007982 25.30291976923593 34.070403166297716 20.923685181458378 19 24.572872643724423 28.767839773260885 26.060743274971486 20.598544308043202 20 26.89560692963037 25.47586704232911 26.568264909103107 21.06026111893741 21 20.507353927684978 30.246067283826388 28.54384685047293 20.7027319380157 22 21.516317837257663 26.79812755752331 26.379804789696117 25.30574981552291 23 18.51101831354397 30.868048567786943 26.19648068021735 24.424452438451734 24 18.35148755618166 26.743518145837523 37.2500125779835 17.654981719997316 25 17.989136814919167 28.559988595961627 32.865956429865165 20.58491815925404 26 17.28466492251962 33.20168377272422 27.457737975447778 22.055913329308378 27 17.313908734151738 32.503081605956936 28.846661803179714 21.336347856711612 28 15.74899795398135 29.026736600254914 36.14000553431274 19.084259911450996 29 15.850145904608572 25.304596833702288 34.842481719997316 24.002775541691822 30 18.430414402629637 30.332750553431275 32.1780455490709 19.058789494868183 31 24.39699050781512 29.34716072985846 26.160214161132355 20.09563460119407 32 25.078193130743948 27.117503521835378 27.968089655866375 19.836213691554303 33 23.47470986784732 28.62308814650835 26.15989971154491 21.74230227409942 34 19.316742973099885 26.992876668679145 29.011328570470248 24.679051787750723 35 19.358774401287985 27.643368048567783 30.013898671764945 22.983958878379283 36 27.003358321593886 27.104925538337692 26.232852015831487 19.658864124236935 37 19.746385926075 31.77303448044543 29.15534648151875 19.325233111960824 38 20.72914570336084 31.053469007848662 27.627226303079087 20.59015898571141 39 20.52978466492252 31.651237673576173 27.03910075803314 20.77987690346817 40 23.69199453276984 26.036530656738442 27.879414872207686 22.392059938284028 41 18.189546018648954 25.515487690346816 29.002628798551015 27.29233749245321 42 21.221259307707786 27.44998155229087 26.299305695310927 25.029453444690414 43 20.624433990742606 27.332796672704095 28.270170892869125 23.772598443684174 44 20.010942845642987 29.483631850808344 28.642479204400615 21.86294609914805 45 17.693763835781848 34.44407409270812 24.958911920574227 22.903250150935804 46 21.820809854430802 30.09282551821292 27.939684376467433 20.146680250888842 47 21.213083618434293 27.91253689541826 28.689541825987792 22.184837660159655 48 21.376597403904206 25.3519739048769 30.604539813510435 22.66688887770846 49 20.591207151002884 24.85587727242235 31.56099064198028 22.991924934594486 50 19.551741631448312 29.59589035352519 29.640122928825384 21.212245086201115 51 18.272141443617095 29.981929630374992 28.176884181927953 23.56904474407996 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1093.0 1 1197.0 2 1301.0 3 4321.5 4 7342.0 5 5387.0 6 3432.0 7 3720.0 8 4008.0 9 4354.0 10 4700.0 11 4877.5 12 5055.0 13 5095.5 14 5136.0 15 4971.5 16 4807.0 17 4637.5 18 4468.0 19 4533.0 20 4598.0 21 4314.5 22 4031.0 23 4251.5 24 4472.0 25 5562.0 26 7916.0 27 9180.0 28 11222.0 29 13264.0 30 15127.0 31 16990.0 32 19912.0 33 22834.0 34 25914.0 35 28994.0 36 32712.0 37 36430.0 38 41356.5 39 46283.0 40 55600.0 41 64917.0 42 73934.0 43 82951.0 44 84568.0 45 86185.0 46 89460.0 47 92735.0 48 93091.0 49 93447.0 50 86319.5 51 79192.0 52 70047.0 53 60902.0 54 52729.5 55 44557.0 56 38679.0 57 32801.0 58 29420.5 59 26040.0 60 22573.5 61 19107.0 62 15927.0 63 12747.0 64 10650.5 65 8554.0 66 6940.5 67 5327.0 68 4334.0 69 3341.0 70 2795.5 71 2250.0 72 1925.5 73 1601.0 74 1237.5 75 692.0 76 510.0 77 483.5 78 457.0 79 342.0 80 227.0 81 186.5 82 146.0 83 113.0 84 80.0 85 47.0 86 14.0 87 10.0 88 6.0 89 5.5 90 5.0 91 3.0 92 1.0 93 2.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 954048.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.235691786477954 #Duplication Level Percentage of deduplicated Percentage of total 1 78.26991787981783 20.534654416478404 2 6.87870430496122 3.6093513207056325 3 2.6649740409827825 2.0975231267456684 4 1.5219196418227448 1.5971445858659383 5 1.0454975243577111 1.371467540628732 6 0.7751615879905925 1.22021403043428 7 0.6093544202282661 1.119078433048573 8 0.5216711232941157 1.0949122243720129 9 0.4503619104534725 1.0634000647524022 >10 5.7482450121977005 36.18216713297594 >50 1.397368135255943 24.607495685142585 >100 0.11229952918334395 4.175481255400391 >500 0.00370218228076958 0.6847616584521965 >1k 8.227071735043511E-4 0.6423485249972377 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4407 0.4619264439525056 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1545 0.16194153753270277 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.047272254645468574 0.0 2 0.0 0.0 0.0 0.19464429462668545 0.0 3 0.0 0.0 0.0 0.3280757362313007 0.0 4 0.0 0.0 0.0 0.6901120279063527 0.0 5 0.0 0.0 0.0 1.1704861809887972 0.0 6 0.0 0.0 0.0 2.0467523646608976 0.0 7 0.0 0.0 0.0 2.4305904943986048 0.0 8 0.0 0.0 0.0 3.4141888039176225 0.0 9 0.0 0.0 0.0 3.8949822231166564 0.0 10 0.0 0.0 0.0 4.660666968538271 0.0 11 0.0 0.0 0.0 5.369121889045415 0.0 12 0.0 0.0 0.0 5.938799724961427 0.0 13 0.0 0.0 0.0 6.211532333802912 0.0 14 0.0 0.0 0.0 6.309535788555712 0.0 15 0.0 0.0 0.0 6.41927869457302 0.0 16 0.0 0.0 0.0 6.675659924867512 0.0 17 0.0 0.0 0.0 6.936862715502784 0.0 18 0.0 0.0 0.0 7.331287314684377 0.0 19 0.0 0.0 0.0 7.496897430737238 0.0 20 0.0 0.0 0.0 7.699717414637418 0.0 21 0.0 0.0 0.0 7.962073187093312 0.0 22 0.0 0.0 0.0 8.21939776615013 0.0 23 0.0 0.0 0.0 8.517600791574429 0.0 24 0.0 0.0 0.0 8.741803347420674 0.0 25 0.0 0.0 0.0 8.929529751123633 0.0 26 0.0 0.0 0.0 9.099542161400684 0.0 27 0.0 0.0 0.0 9.274376132018515 0.0 28 0.0 0.0 0.0 9.447637854699135 0.0 29 0.0 0.0 0.0 9.642491782384115 0.0 30 0.0 0.0 0.0 9.897824847387133 0.0 31 0.0 0.0 0.0 10.108715704031663 0.0 32 0.0 0.0 0.0 10.289419400281746 0.0 33 0.0 0.0 0.0 10.486474475078822 0.0 34 0.0 0.0 0.0 10.698413497014826 0.0 35 0.0 0.0 0.0 10.954899543838465 0.0 36 0.0 0.0 0.0 11.166419299657878 0.0 37 0.0 0.0 0.0 11.366199604212786 0.0 38 0.0 0.0 0.0 11.575727845978399 0.0 39 0.0 0.0 0.0 11.79144026296371 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTTA 20 7.0326845E-4 45.0 15 CGGGTAC 85 0.0 45.0 6 GACCGTA 25 3.890306E-5 45.0 9 GTTAGCG 20 7.0326845E-4 45.0 1 CTCGGTT 20 7.0326845E-4 45.0 19 CTACGTT 20 7.0326845E-4 45.0 30 TGATTCG 55 1.8189894E-12 45.0 15 TGTTACG 35 1.2116288E-7 45.0 1 GCTAGCG 25 3.890306E-5 45.0 1 CCGACGG 20 7.0326845E-4 45.0 2 CGTAACA 20 7.0326845E-4 45.0 33 CCGAAAC 25 3.890306E-5 45.0 44 ACCAACG 20 7.0326845E-4 45.0 21 GCTCGTC 25 3.890306E-5 45.0 9 TCGGTCA 20 7.0326845E-4 45.0 22 GCGTAAC 70 0.0 45.0 32 TCGCGAG 20 7.0326845E-4 45.0 1 ACGCGTA 20 7.0326845E-4 45.0 23 AATACGG 100 0.0 42.75 2 CGCATCG 75 0.0 42.000004 21 >>END_MODULE