##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547106_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1659776 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.507926973278323 31.0 31.0 33.0 30.0 34.0 2 31.87345159828796 31.0 31.0 34.0 30.0 34.0 3 31.909848075884938 33.0 31.0 34.0 30.0 34.0 4 35.715516431132876 37.0 35.0 37.0 33.0 37.0 5 35.67691604168273 37.0 35.0 37.0 33.0 37.0 6 35.724427874604764 37.0 35.0 37.0 33.0 37.0 7 36.066759008444514 37.0 35.0 37.0 35.0 37.0 8 34.7631126127863 37.0 35.0 37.0 35.0 37.0 9 37.080695828834735 39.0 37.0 39.0 34.0 39.0 10 36.96411925464641 39.0 37.0 39.0 32.0 39.0 11 36.94003708934218 39.0 37.0 39.0 33.0 39.0 12 36.806454605922724 39.0 35.0 39.0 33.0 39.0 13 36.81341879868127 39.0 35.0 39.0 33.0 39.0 14 37.958482349425466 40.0 37.0 41.0 33.0 41.0 15 38.05525022653659 40.0 37.0 41.0 33.0 41.0 16 38.0511635305005 40.0 37.0 41.0 33.0 41.0 17 37.9236619881237 40.0 36.0 41.0 33.0 41.0 18 37.80860670355518 39.0 36.0 41.0 33.0 41.0 19 37.69806166615254 39.0 36.0 41.0 33.0 41.0 20 37.520363591231586 39.0 35.0 41.0 33.0 41.0 21 37.43400615504743 39.0 35.0 41.0 33.0 41.0 22 37.35124558976633 39.0 35.0 41.0 32.0 41.0 23 37.24552529979949 39.0 35.0 41.0 32.0 41.0 24 37.10020990784299 39.0 35.0 41.0 32.0 41.0 25 37.007354606886715 39.0 35.0 41.0 32.0 41.0 26 36.92346316611398 39.0 35.0 41.0 32.0 41.0 27 36.82789545095242 39.0 35.0 41.0 31.0 41.0 28 36.83170439866584 39.0 35.0 41.0 31.0 41.0 29 36.77048710187399 39.0 35.0 41.0 31.0 41.0 30 36.6717906512686 39.0 35.0 41.0 31.0 41.0 31 36.53590845993676 39.0 35.0 41.0 31.0 41.0 32 36.34519959319812 39.0 35.0 41.0 30.0 41.0 33 36.06884061463715 39.0 35.0 41.0 29.0 41.0 34 35.759501282100715 39.0 35.0 41.0 27.0 41.0 35 35.535519250790465 39.0 35.0 41.0 25.0 41.0 36 35.36610723374721 38.0 35.0 41.0 25.0 41.0 37 35.312337929937534 38.0 35.0 41.0 24.0 41.0 38 35.154013553636155 38.0 35.0 41.0 24.0 41.0 39 35.07668926409347 38.0 34.0 41.0 23.0 41.0 40 34.93118107503663 38.0 34.0 40.0 23.0 41.0 41 34.82402203670857 38.0 34.0 40.0 23.0 41.0 42 34.75330406030693 38.0 34.0 40.0 23.0 41.0 43 34.6749784308244 38.0 34.0 40.0 23.0 41.0 44 34.54252381044189 38.0 34.0 40.0 22.0 41.0 45 34.416136273810444 37.0 34.0 40.0 22.0 41.0 46 34.333987839322894 37.0 34.0 40.0 22.0 41.0 47 34.270292497300844 37.0 34.0 40.0 22.0 41.0 48 34.201430192989896 37.0 33.0 40.0 22.0 41.0 49 34.111294536130174 37.0 33.0 40.0 22.0 41.0 50 34.020788347343256 37.0 33.0 40.0 21.0 41.0 51 33.66841368955811 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 7.0 13 5.0 14 17.0 15 46.0 16 121.0 17 280.0 18 657.0 19 1338.0 20 2264.0 21 3717.0 22 5774.0 23 8751.0 24 13568.0 25 21624.0 26 31857.0 27 36432.0 28 36059.0 29 35719.0 30 38527.0 31 44526.0 32 53601.0 33 68333.0 34 105017.0 35 142635.0 36 133506.0 37 176449.0 38 260958.0 39 437691.0 40 294.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.76853262126937 22.862181402791702 25.548567999537287 17.820717976401635 2 35.92894462867278 23.956184448985887 26.8090995411429 13.305771381198428 3 28.692606713195033 24.662665323513536 33.55537132721524 13.089356636076193 4 24.940895638929593 27.25795529035243 32.94727722295057 14.853871847767412 5 22.474116989280482 30.391028668928822 32.55119967995682 14.583654661833886 6 20.65357012030539 38.979717745045114 30.129909096167196 10.2368030384823 7 84.69745315030463 3.0922847420374797 10.73343631911776 1.4768257885401403 8 82.4389556181075 5.4388664494486 10.212341906377729 1.9098360260661678 9 80.08086633377035 4.5858597786689295 12.397335544073416 2.935938343487314 10 34.914711382740805 30.343431884784454 20.197725476208838 14.544131256265905 11 29.252802787846072 26.67010488162258 27.85056537749672 16.226526953034625 12 25.516997474357982 24.0352915092157 31.27976305236369 19.16794796406262 13 22.920020532891186 25.750161467571527 33.03614463638467 18.293673363152617 14 21.261965470039332 26.77138360839053 33.22598953111745 18.740661390452686 15 21.335650111822318 23.861292126166422 35.95810519009794 18.844952571913318 16 23.929735096784142 22.856879482532584 34.63985501658055 18.573530404102723 17 22.80373978175368 23.09926158710573 32.32032515230971 21.77667347883088 18 24.6786915824786 22.62124527647104 32.492999055294206 20.207064085756148 19 26.045864020205133 24.946559053751834 29.64032495951261 19.367251966530425 20 28.137712558803113 24.333102780134187 28.989694994987275 18.539489666075422 21 26.44314654507596 24.678932578854017 30.350963021516158 18.526957854553867 22 25.138211421300223 21.975194243078583 30.773309169430092 22.1132851661911 23 23.305795480835968 26.597685470810518 30.008567421145987 20.087951627207527 24 21.960071720521324 25.084830724145906 33.56266146757152 19.39243608776124 25 23.284828796174907 25.119052209454768 31.79537479756305 19.80074419680728 26 21.97664022133107 26.260049548854784 30.48887319734711 21.27443703246703 27 22.138409038328064 24.79906927199815 31.152215720675564 21.910305968998227 28 20.905531830801266 26.79427826405491 31.96581948407496 20.33437042106887 29 21.833910117991824 24.956018161486853 31.696445785455385 21.513625935065935 30 22.841274967224493 24.357804908614174 32.68284395002699 20.11807617413434 31 24.331054310943163 25.622252641320276 30.04471687745816 20.0019761702784 32 23.687834984961825 24.94818577928588 30.487306720906915 20.876672514845378 33 23.02274523791162 25.81161554330223 28.96854756304465 22.197091655741495 34 21.50043138351199 27.80766802267294 30.364037074882393 20.327863518932677 35 22.238784028688208 27.99516320274543 29.221714255417595 20.544338513148762 36 24.297194320197423 28.954991516927585 26.67534655278785 20.072467610087145 37 23.73772123467263 28.298095646641475 26.992738779208757 20.971444339477134 38 23.38466154469037 28.448055641243158 27.959676486465646 20.207606327600832 39 23.84153042338243 27.037323108660445 26.430674982648263 22.690471485308862 40 24.867090498958895 26.379222256497265 28.049869379964527 20.703817864579317 41 21.818305602683736 26.851936646872833 28.132229891262433 23.197527859180997 42 23.69572761625665 27.157459801804578 27.090342311251636 22.05647027068713 43 23.034554060306935 26.05508213156474 28.323822009716977 22.586541798411353 44 23.42111224647181 27.001233901442124 28.008538501580936 21.56911535050513 45 22.54249971080435 26.48712838358911 27.7456114560037 23.224760449602837 46 23.041904449757077 26.74204229968381 27.854240572221794 22.361812678337316 47 22.529666653813525 27.15282062157785 29.156343988586414 21.16116873602221 48 23.236629521092002 26.61051852780134 28.76165217475129 21.391199776355364 49 23.058472950566824 26.616181942623584 28.65904796791856 21.66629713889103 50 22.074605247937072 27.30603406724763 29.124833712500966 21.494526972314336 51 22.263968149919027 26.891821547003936 28.343583712500966 22.50062659057608 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1106.0 1 1661.0 2 2216.0 3 16426.5 4 30637.0 5 21914.5 6 13192.0 7 13014.5 8 12837.0 9 13334.0 10 13831.0 11 13984.5 12 14138.0 13 13836.5 14 13535.0 15 13095.5 16 12656.0 17 12232.0 18 11808.0 19 11209.0 20 10610.0 21 10493.5 22 10377.0 23 10422.0 24 10467.0 25 11152.0 26 13065.5 27 14294.0 28 16501.0 29 18708.0 30 21474.5 31 24241.0 32 27763.0 33 31285.0 34 37093.5 35 42902.0 36 47093.0 37 51284.0 38 55987.0 39 60690.0 40 67303.5 41 73917.0 42 80859.0 43 87801.0 44 94174.0 45 100547.0 46 106186.0 47 111825.0 48 116612.0 49 121399.0 50 123317.0 51 125235.0 52 120241.5 53 115248.0 54 108372.5 55 101497.0 56 95937.0 57 90377.0 58 84076.5 59 77776.0 60 70934.0 61 64092.0 62 57351.5 63 50611.0 64 44515.5 65 38420.0 66 33093.5 67 27767.0 68 23555.0 69 19343.0 70 16744.0 71 14145.0 72 12006.0 73 9867.0 74 8782.5 75 6605.5 76 5513.0 77 3976.5 78 2440.0 79 1659.5 80 879.0 81 675.0 82 471.0 83 314.0 84 157.0 85 106.5 86 56.0 87 38.0 88 20.0 89 15.5 90 11.0 91 8.5 92 6.0 93 6.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1659776.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.33837781593708 #Duplication Level Percentage of deduplicated Percentage of total 1 72.19440341314535 21.902610869441812 2 6.66824400917522 4.046074122384336 3 3.2382845575221504 2.947329011448649 4 2.314506757756752 2.8087352189745562 5 1.7380262397915809 2.6364448358404715 6 1.4376199908523664 2.616903506293386 7 1.2391975994358464 2.6316671472200874 8 1.0972427613748301 2.663085236031335 9 0.9616395520067285 2.625712564637574 >10 8.97842413354321 49.93984334001636 >50 0.0994694568423936 1.9513464044715556 >100 0.03131479472505188 1.9003221792967848 >500 0.0012200503713902893 0.21129024290311138 >1k 2.0334172856504822E-4 0.07112924089555837 >5k 0.0 0.0 >10k+ 2.0334172856504822E-4 1.0475060801444762 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16980 1.0230296136346109 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.024909385362844E-5 0.0 0.0 0.028256825017351737 0.0 2 6.024909385362844E-5 0.0 0.0 0.08718043880620036 0.0 3 6.024909385362844E-5 0.0 0.0 0.15417743117143518 0.0 4 6.024909385362844E-5 0.0 0.0 0.24599705020436494 0.0 5 6.024909385362844E-5 0.0 0.0 0.42204490244466725 0.0 6 6.024909385362844E-5 0.0 0.0 0.8639720058610318 0.0 7 6.024909385362844E-5 0.0 0.0 1.0921955733785764 0.0 8 6.024909385362844E-5 0.0 0.0 1.552619148608005 0.0 9 6.024909385362844E-5 0.0 0.0 1.8389830916943009 0.0 10 6.024909385362844E-5 0.0 0.0 2.2296984653350815 0.0 11 6.024909385362844E-5 0.0 0.0 2.482383164957199 0.0 12 6.024909385362844E-5 0.0 0.0 2.6846996221176833 0.0 13 6.024909385362844E-5 0.0 0.0 2.818091115909617 0.0 14 6.024909385362844E-5 0.0 0.0 2.8980416634533817 0.0 15 6.024909385362844E-5 0.0 0.0 2.9651591540063236 0.0 16 6.024909385362844E-5 0.0 0.0 3.0583042531040334 0.0 17 6.024909385362844E-5 0.0 0.0 3.1671141166036865 0.0 18 6.024909385362844E-5 0.0 0.0 3.310024967224493 0.0 19 6.024909385362844E-5 0.0 0.0 3.3908190020822087 0.0 20 6.024909385362844E-5 0.0 0.0 3.4775776972314336 0.0 21 6.024909385362844E-5 0.0 0.0 3.5745787383357754 0.0 22 6.024909385362844E-5 0.0 0.0 3.6818823744890876 0.0 23 6.024909385362844E-5 0.0 0.0 3.8103334425850237 0.0 24 6.024909385362844E-5 0.0 0.0 3.917576829644482 0.0 25 6.024909385362844E-5 0.0 0.0 4.009577195958973 0.0 26 6.024909385362844E-5 0.0 0.0 4.104529767872291 0.0 27 1.2049818770725688E-4 0.0 0.0 4.2094234402714585 0.0 28 1.2049818770725688E-4 0.0 0.0 4.312871134418138 0.0 29 1.2049818770725688E-4 0.0 0.0 4.433007827562274 0.0 30 1.2049818770725688E-4 0.0 0.0 4.581461594817614 0.0 31 1.2049818770725688E-4 0.0 0.0 4.699188324207604 0.0 32 1.2049818770725688E-4 0.0 0.0 4.837821489164803 0.0 33 1.8074728156088532E-4 0.0 0.0 4.964645831726691 0.0 34 1.8074728156088532E-4 0.0 0.0 5.095627361764479 0.0 35 1.8074728156088532E-4 0.0 0.0 5.238899706948407 0.0 36 1.8074728156088532E-4 0.0 0.0 5.370664475206293 0.0 37 1.8074728156088532E-4 0.0 0.0 5.507550416441736 0.0 38 1.8074728156088532E-4 0.0 0.0 5.67895908845531 0.0 39 1.8074728156088532E-4 0.0 0.0 5.922485925811676 6.024909385362844E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTAAT 20 7.0341944E-4 45.0 6 CGTTTTT 13125 0.0 42.17143 1 TACGCGT 35 6.2499676E-6 38.571426 22 ACGCGTA 35 6.2499676E-6 38.571426 23 TAGTGCG 100 0.0 38.25 1 GCGTTAG 130 0.0 38.076927 1 ACGGGTA 190 0.0 37.894737 5 TAGGGAC 1305 0.0 37.75862 5 AGGGCGA 2050 0.0 37.756096 6 TAATGCG 90 0.0 37.500004 1 TAGGGCG 870 0.0 37.5 5 CGCGTAT 30 1.1401404E-4 37.499996 24 GGGCGAT 4115 0.0 37.399757 7 ACGGGAT 430 0.0 37.15116 5 TACGGGA 540 0.0 37.083332 4 TATAGCG 55 2.750312E-9 36.81818 1 ATGGGCG 730 0.0 36.67808 5 ACCCGCT 370 0.0 36.486485 34 CACGACC 1895 0.0 36.332455 27 AGGGAAC 1995 0.0 36.203007 6 >>END_MODULE