##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547103_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 544327 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.494743049674184 31.0 31.0 33.0 30.0 34.0 2 31.84481387107382 31.0 31.0 34.0 30.0 34.0 3 31.930324970100692 33.0 31.0 34.0 30.0 34.0 4 35.65820361657607 37.0 35.0 37.0 33.0 37.0 5 35.58884089894494 37.0 35.0 37.0 33.0 37.0 6 35.63839934451166 37.0 35.0 37.0 33.0 37.0 7 36.00704723447487 37.0 35.0 37.0 35.0 37.0 8 34.688970049253484 37.0 35.0 37.0 33.0 37.0 9 37.026300367242484 39.0 37.0 39.0 34.0 39.0 10 37.00857389032696 39.0 37.0 39.0 32.0 39.0 11 36.800741098641076 39.0 35.0 39.0 32.0 39.0 12 35.84518680866464 37.0 35.0 39.0 32.0 39.0 13 35.34155939352632 37.0 35.0 39.0 30.0 39.0 14 36.30451180999656 38.0 35.0 41.0 31.0 41.0 15 36.73402017537252 38.0 35.0 41.0 32.0 41.0 16 36.92853376738615 38.0 35.0 41.0 32.0 41.0 17 36.85855193661163 38.0 35.0 41.0 32.0 41.0 18 36.839315338022914 38.0 35.0 40.0 32.0 41.0 19 36.73731231410531 37.0 35.0 40.0 32.0 41.0 20 36.54477914929812 37.0 35.0 40.0 32.0 41.0 21 36.38668116775394 37.0 35.0 40.0 32.0 41.0 22 36.288350568683896 36.0 35.0 40.0 31.0 41.0 23 36.27902161752035 36.0 35.0 40.0 31.0 41.0 24 36.12313370455627 36.0 35.0 40.0 31.0 41.0 25 36.01902716565594 35.0 35.0 40.0 31.0 41.0 26 35.907741118849515 35.0 35.0 40.0 31.0 41.0 27 35.80341963562344 35.0 35.0 40.0 31.0 41.0 28 35.85990773928172 36.0 35.0 40.0 31.0 41.0 29 35.85235161952282 36.0 35.0 40.0 31.0 41.0 30 35.818212214349096 36.0 35.0 40.0 31.0 41.0 31 35.6270513863909 36.0 35.0 40.0 30.0 41.0 32 35.4447822724208 35.0 34.0 40.0 30.0 41.0 33 35.24914986763471 35.0 34.0 40.0 29.0 41.0 34 35.14123863045559 36.0 34.0 40.0 29.0 41.0 35 35.01461805128167 35.0 34.0 40.0 29.0 41.0 36 34.79493576471496 35.0 34.0 40.0 27.0 41.0 37 34.671109461775735 35.0 34.0 40.0 26.0 41.0 38 34.616576065490044 35.0 34.0 40.0 27.0 41.0 39 34.57163065583739 35.0 34.0 40.0 26.0 41.0 40 34.34422323346077 35.0 34.0 40.0 24.0 41.0 41 34.30637098655771 35.0 34.0 40.0 24.0 41.0 42 34.24474442752243 35.0 34.0 40.0 24.0 41.0 43 34.125582600164975 35.0 33.0 40.0 24.0 41.0 44 34.02098922155248 35.0 34.0 40.0 23.0 41.0 45 33.87349148581643 35.0 34.0 40.0 23.0 41.0 46 33.82876102048952 35.0 34.0 40.0 23.0 41.0 47 33.78421059399956 35.0 33.0 39.0 23.0 41.0 48 33.75291139333525 35.0 34.0 39.0 23.0 41.0 49 33.73963812193773 35.0 34.0 39.0 24.0 41.0 50 33.576166532249914 35.0 33.0 39.0 23.0 41.0 51 33.19683205132209 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 0.0 14 11.0 15 21.0 16 47.0 17 129.0 18 266.0 19 572.0 20 956.0 21 1542.0 22 2313.0 23 3421.0 24 4967.0 25 6949.0 26 9152.0 27 10588.0 28 11264.0 29 12467.0 30 14123.0 31 17004.0 32 21239.0 33 28220.0 34 53695.0 35 103712.0 36 35396.0 37 42149.0 38 61255.0 39 102737.0 40 126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.15507038967385 24.597530528524214 28.63076790238221 13.616631179419725 2 29.820126504839923 27.213605057254185 29.53353407051276 13.43273436739313 3 28.03700716664799 26.279056523009146 31.777222147716355 13.90671416262651 4 24.604327913184537 29.33934932494622 30.57390134974014 15.482421412129105 5 22.453782377137273 32.49774492171066 30.340585714102 14.707886987050065 6 20.187497588765577 41.95933694268335 27.192845477075362 10.660319991475713 7 85.49603455275965 5.061663301655071 7.605538582506472 1.836763563078811 8 83.59864566703472 6.516671045162191 6.5008717186544125 3.383811569148692 9 81.91620110705513 5.421189836256515 9.608195073916965 3.054413982771386 10 56.65895684028167 18.74094064780913 12.88784131597367 11.712261195935532 11 50.20070656057848 19.36133978288786 18.6889498408126 11.749003815721066 12 43.88354794085173 20.528469100375325 21.917340128268485 13.670642830504459 13 19.387794469133443 44.63842506434551 23.534199111930878 12.439581354590164 14 13.385336387869792 45.4623783130361 27.720285784096692 13.43199951499742 15 12.00528358872516 21.905582489937114 52.670545462562025 13.418588458775698 16 13.449268546296619 16.72615909186941 50.716021803070575 19.10855055876339 17 13.952091298061642 17.806575826663018 28.372099859092053 39.86923301618329 18 20.026013774808156 22.485013603954975 35.028209146340345 22.460763474896524 19 28.615336002072283 24.896799166677383 25.244200636749603 21.243664194500735 20 30.67090186597395 22.98305981514788 24.653930449895007 21.692107868983165 21 20.76986811236628 29.549700823218394 28.543504180391565 21.136926884023758 22 23.029906655374436 24.518717609084245 24.36880772035927 28.08256801518205 23 18.465554712516557 31.99290132585744 23.139583375434253 26.40196058619176 24 19.481488149586554 23.85937129703285 40.04302560776886 16.616114945611738 25 15.96797513259493 25.247323759431374 37.109678557190804 21.675022550782895 26 15.60569290150957 35.20861540948731 27.594074885133384 21.59161680386973 27 17.73309058709195 34.13867032133258 27.9394555111174 20.188783580458068 28 14.271752090195783 29.239041972931712 39.26794004339303 17.22126589347947 29 14.980884652056575 24.74578699935884 36.98310023202964 23.29022811655494 30 17.920110521800314 31.686467876846088 30.6334243937927 19.759997207560897 31 29.471071616877353 26.897251100900743 23.51141868766385 20.12025859455805 32 30.471756866736357 26.8285424019018 25.327973809860616 17.371726921501228 33 28.19683756271506 27.222423286002716 23.95233012509025 20.628409026191978 34 19.517495916976376 28.482144005349724 27.207909951187432 24.792450126486468 35 20.42356892088763 25.894728720052466 30.478003112099895 23.203699246960007 36 33.23590415320203 23.249076382395142 24.993248543614406 18.521770920788423 37 21.228599720388665 31.105383344937877 28.19500043172578 19.471016502947677 38 21.918074980664194 32.58666206159165 22.671482399366557 22.823780558377592 39 21.450525143893284 31.13734942415129 25.91493716093451 21.49718827102091 40 25.0204380822557 25.408623860289865 24.20732390640185 25.363614151052584 41 17.73933683245549 23.95618810016773 26.908273886836405 31.396201180540373 42 23.42305268707964 25.8245503162621 23.597763844159854 27.15463315249841 43 23.00822850970097 25.867355468312248 26.42694556764592 24.697470454340863 44 21.02008535310576 30.562327424507696 27.12229964708714 21.295287575299408 45 17.806943252860872 36.23061137882192 22.153778886588395 23.808666481728814 46 23.988154179381144 30.904952354007794 25.591418393722893 19.515475072888172 47 22.785017094503857 25.754004486273875 26.823214722032894 24.637763697189374 48 24.621045805186956 21.92027953785133 30.740529130467532 22.718145526494187 49 22.758378695159344 20.65614970413005 32.57141387438065 24.014057726329945 50 19.79435155706037 31.4568265031865 27.025850270150116 21.722971669603012 51 18.831143779382614 32.28518886625135 23.68925296742583 25.194414386940206 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 760.0 1 879.0 2 998.0 3 2785.5 4 4573.0 5 3367.5 6 2162.0 7 2427.0 8 2692.0 9 3084.5 10 3477.0 11 3593.0 12 3709.0 13 3685.5 14 3662.0 15 3502.0 16 3342.0 17 3327.5 18 3313.0 19 3103.0 20 2893.0 21 2760.5 22 2628.0 23 2614.5 24 2601.0 25 2487.0 26 2951.5 27 3530.0 28 3332.0 29 3134.0 30 4112.5 31 5091.0 32 5849.5 33 6608.0 34 7615.5 35 8623.0 36 9804.0 37 10985.0 38 13853.0 39 16721.0 40 26224.5 41 35728.0 42 44335.0 43 52942.0 44 54060.0 45 55178.0 46 54095.0 47 53012.0 48 52813.0 49 52614.0 50 48594.0 51 44574.0 52 40046.5 53 35519.0 54 31815.0 55 28111.0 56 24363.0 57 20615.0 58 19598.0 59 18581.0 60 16880.5 61 15180.0 62 13547.0 63 11914.0 64 10193.0 65 8472.0 66 7356.5 67 6241.0 68 5341.0 69 4441.0 70 3512.0 71 2583.0 72 2242.0 73 1901.0 74 1584.5 75 998.5 76 729.0 77 533.0 78 337.0 79 265.5 80 194.0 81 193.5 82 193.0 83 132.0 84 71.0 85 56.0 86 41.0 87 24.5 88 8.0 89 6.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 544327.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.77193095341222 #Duplication Level Percentage of deduplicated Percentage of total 1 80.87568531386309 21.651982630326373 2 6.8303658937294305 3.6572416818693205 3 2.377200450996717 1.909267390095135 4 1.2411950962906355 1.329167576704269 5 0.7601601860530101 1.0175478007272085 6 0.4909367315192598 0.7885994567236497 7 0.36604344516957144 0.6859782888020228 8 0.334817453593787 0.7170967799688133 9 0.2899713272751123 0.6986783117050744 >10 4.643756767726555 32.37351033255516 >50 1.6721038424104797 29.823781724329628 >100 0.11294276365540308 4.032946552822325 >500 0.0034433769407135086 0.5496120359313956 >1k 0.0013773507762854034 0.7645894374396168 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2698 0.49565794090684456 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1449 0.266200280346189 No Hit GAGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCT 713 0.13098743953542633 No Hit GAGAGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTT 649 0.11922980120405566 No Hit AAGCTGTCTCTTATACACATCTGACGCAGCTAGGATCGTATGCCGTCTTCT 575 0.10563503188340832 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.079364058736752 0.0 2 0.0 0.0 0.0 0.2781416317764873 0.0 3 0.0 0.0 0.0 0.41004763680655193 0.0 4 0.0 0.0 0.0 0.8493056563426029 0.0 5 0.0 0.0 0.0 1.3221831729824167 0.0 6 0.0 0.0 0.0 2.2155799730676597 0.0 7 0.0 0.0 0.0 2.559674607359179 0.0 8 0.0 0.0 0.0 3.6127180904125646 0.0 9 0.0 0.0 0.0 4.06024319940036 0.0 10 0.0 0.0 0.0 4.775805719723622 0.0 11 0.0 0.0 0.0 5.399511690583051 0.0 12 0.0 0.0 0.0 5.938342209737897 0.0 13 0.0 0.0 0.0 6.1837829099052595 0.0 14 0.0 0.0 0.0 6.277109164160514 0.0 15 0.0 0.0 0.0 6.3814582043514285 0.0 16 0.0 0.0 0.0 6.6046696195485435 0.0 17 0.0 0.0 0.0 6.83008559193279 0.0 18 0.0 0.0 0.0 7.200451199370966 0.0 19 0.0 0.0 0.0 7.334194335390308 0.0 20 0.0 0.0 0.0 7.479327683543164 0.0 21 0.0 0.0 0.0 7.681779518561453 0.0 22 0.0 0.0 0.0 7.875780551029069 0.0 23 0.0 0.0 0.0 8.095685130445485 0.0 24 0.0 0.0 0.0 8.258087509897543 0.0 25 0.0 0.0 0.0 8.375112753914467 0.0 26 0.0 0.0 0.0 8.508121037538098 0.0 27 0.0 0.0 0.0 8.61577691350971 0.0 28 0.0 0.0 0.0 8.733353296823417 0.0 29 0.0 0.0 0.0 8.856441073104953 0.0 30 0.0 0.0 0.0 9.038317041043344 0.0 31 0.0 0.0 0.0 9.192636044142583 0.0 32 0.0 0.0 0.0 9.315907533523047 0.0 33 0.0 0.0 0.0 9.452773792224159 0.0 34 0.0 0.0 0.0 9.589272624727416 0.0 35 0.0 0.0 0.0 9.789152476360718 0.0 36 0.0 0.0 0.0 9.928774431545744 0.0 37 0.0 0.0 0.0 10.07868432027072 0.0 38 0.0 0.0 0.0 10.21481572657612 0.0 39 0.0 0.0 0.0 10.358295656838628 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCAGT 35 1.2103555E-7 45.000004 10 CGACAGG 35 1.2103555E-7 45.000004 2 ACGGGAT 45 3.8380676E-10 45.000004 5 TATTCCG 35 1.2103555E-7 45.000004 1 AACGTTG 20 7.03001E-4 45.0 1 GCCCCAC 20 7.03001E-4 45.0 26 CTAGACG 20 7.03001E-4 45.0 1 TCGTTTA 25 3.8880906E-5 45.0 16 TCGCAAG 25 3.8880906E-5 45.0 1 AAATCCG 20 7.03001E-4 45.0 1 CGAACAC 20 7.03001E-4 45.0 36 CGTATTG 25 3.8880906E-5 45.0 40 AATCACG 25 3.8880906E-5 45.0 38 AGTCACG 40 6.8030204E-9 45.0 1 GTCCTAT 20 7.03001E-4 45.0 17 CAACCGT 20 7.03001E-4 45.0 5 GTTAGTC 25 3.8880906E-5 45.0 35 TTCGTGC 20 7.03001E-4 45.0 14 TAACGAG 20 7.03001E-4 45.0 1 AATATTG 20 7.03001E-4 45.0 24 >>END_MODULE