##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547102_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 628376 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.449966262237897 31.0 31.0 33.0 30.0 34.0 2 31.808655963945153 31.0 31.0 34.0 30.0 34.0 3 31.9067230448012 33.0 31.0 34.0 30.0 34.0 4 35.65321559066546 37.0 35.0 37.0 33.0 37.0 5 35.575746050135585 37.0 35.0 37.0 33.0 37.0 6 35.62060613390709 37.0 35.0 37.0 33.0 37.0 7 35.98206010414147 37.0 35.0 37.0 35.0 37.0 8 34.669209199587506 37.0 35.0 37.0 33.0 37.0 9 37.00437954345806 39.0 37.0 39.0 33.0 39.0 10 36.94637287229302 39.0 37.0 39.0 32.0 39.0 11 36.74154009701198 39.0 35.0 39.0 32.0 39.0 12 35.82778304709282 37.0 35.0 39.0 32.0 39.0 13 35.401180185112096 37.0 35.0 39.0 30.0 39.0 14 36.363447999287054 38.0 35.0 41.0 31.0 41.0 15 36.75343424955759 38.0 35.0 41.0 32.0 41.0 16 36.942111092721554 38.0 35.0 41.0 32.0 41.0 17 36.878337173921345 38.0 35.0 41.0 32.0 41.0 18 36.83228512864909 38.0 35.0 40.0 32.0 41.0 19 36.75509726660471 37.0 35.0 40.0 32.0 41.0 20 36.56196290119291 37.0 35.0 40.0 32.0 41.0 21 36.39434510547825 37.0 35.0 40.0 31.0 41.0 22 36.29710237182833 37.0 35.0 40.0 31.0 41.0 23 36.29254140832877 37.0 35.0 40.0 31.0 41.0 24 36.11980565775905 36.0 35.0 40.0 31.0 41.0 25 35.998402230511665 36.0 35.0 40.0 31.0 41.0 26 35.84347269787516 36.0 35.0 40.0 31.0 41.0 27 35.75719155410137 35.0 35.0 40.0 30.0 41.0 28 35.8207999668988 36.0 35.0 40.0 31.0 41.0 29 35.838482055329926 36.0 35.0 40.0 31.0 41.0 30 35.82795173590335 36.0 35.0 40.0 31.0 41.0 31 35.654106776834254 36.0 35.0 40.0 30.0 41.0 32 35.42546819101939 35.0 34.0 40.0 30.0 41.0 33 35.24175016232319 36.0 34.0 40.0 29.0 41.0 34 35.110459342813854 36.0 34.0 40.0 29.0 41.0 35 34.993096489999616 35.0 34.0 40.0 28.0 41.0 36 34.79359650909647 35.0 34.0 40.0 26.0 41.0 37 34.68078347995468 35.0 34.0 40.0 26.0 41.0 38 34.58381128496314 35.0 34.0 40.0 26.0 41.0 39 34.55658077329497 35.0 34.0 40.0 26.0 41.0 40 34.34453257285447 35.0 34.0 40.0 24.0 41.0 41 34.335937400537254 35.0 34.0 40.0 24.0 41.0 42 34.27706341426153 35.0 34.0 40.0 24.0 41.0 43 34.15985333621908 35.0 33.0 40.0 24.0 41.0 44 34.02187225482832 35.0 34.0 40.0 23.0 41.0 45 33.91934128610895 35.0 33.0 40.0 23.0 41.0 46 33.888773600519436 35.0 33.0 40.0 23.0 41.0 47 33.84301755636753 35.0 33.0 39.0 23.0 41.0 48 33.80100608552841 35.0 33.0 39.0 23.0 41.0 49 33.769528116923624 35.0 33.0 39.0 24.0 41.0 50 33.60647128470852 35.0 33.0 39.0 24.0 41.0 51 33.23562644022051 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 4.0 14 5.0 15 22.0 16 64.0 17 165.0 18 367.0 19 652.0 20 1145.0 21 1798.0 22 2683.0 23 4025.0 24 5668.0 25 7898.0 26 10436.0 27 12012.0 28 13105.0 29 14623.0 30 16879.0 31 20142.0 32 24730.0 33 32703.0 34 61925.0 35 113842.0 36 43210.0 37 50252.0 38 72431.0 39 117481.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.34687511935529 24.61806307051829 29.1277833653736 13.907278444752825 2 29.940195042458654 26.83297898073765 29.660107960838733 13.566718015964963 3 28.2060422422244 26.374177244197742 31.288273263141814 14.131507250436046 4 24.48597654907253 29.444313595681564 31.210135332985345 14.859574522260557 5 22.991489172088052 32.280513577857846 30.40599895603906 14.321998294015048 6 21.540447120832113 40.74344023323615 26.874196341044215 10.84191630488752 7 86.37408175996538 4.61634435433562 7.278285612435867 1.7312882732631418 8 84.17444332692529 6.429908207824614 6.1792620978522415 3.2163863673978637 9 82.92439558480909 4.922053038308274 9.255286643665576 2.898264733217055 10 57.03129973137102 19.375660432607226 12.620946694335874 10.97209314168587 11 49.416909620991255 19.48530815944594 18.77952054184119 12.318261677721619 12 42.40964008810012 20.351668427820286 22.42367627025857 14.815015213821026 13 20.630641526729217 42.02770315861841 23.93312284364775 13.408532471004623 14 15.199657529886565 43.24703680598877 27.236559002889987 14.316746661234674 15 13.377977516646084 22.132926782690618 49.97135473028887 14.517740970374426 16 14.60208537563497 17.082288311456832 48.7361070441901 19.579519268718094 17 15.897328987739826 17.964880899334158 28.58670604860784 37.55108406431818 18 20.94462551084064 21.970762728048175 34.76230791755255 22.322303843558633 19 28.373457929647216 24.54931442321158 26.036481342380995 21.04074630476021 20 31.747393280456286 22.14247520592766 24.458604402459674 21.651527111156376 21 22.548124053114694 28.52066278788496 27.260907482144447 21.670305676855893 22 23.25454823226858 24.525125084344403 24.660871834697698 27.55945484868932 23 19.869791335124194 30.448330299056614 23.072809909990198 26.609068455828993 24 21.06827759176035 23.08745082562033 37.73186754427286 18.11240403834647 25 17.751632780373534 24.12997950271812 35.693438323551504 22.424949393356844 26 16.637172648223356 32.71894534482539 27.49850408035953 23.145377926591724 27 17.976657287993174 33.479954676817705 27.408271480769475 21.135116554419646 28 15.080143099036244 28.868066253326035 37.55999592600608 18.491794721631635 29 14.920207009815778 23.841617120959427 37.46562567634665 23.77255019287815 30 18.59459941181713 29.345169134403605 30.770907864081376 21.289323589697887 31 29.04869059289343 26.807039097610346 23.04909799228487 21.095172317211354 32 30.404089271391648 26.331845901180184 24.355640571886898 18.908424255541266 33 28.606280316243776 27.41240913083886 22.47905712503342 21.50225342788394 34 19.503609303983602 28.813321960100325 26.459317351394706 25.22375138452137 35 20.219263625599957 26.470457178504592 28.898143786522716 24.41213540937273 36 31.684691967866375 25.043286185341262 24.229442244770645 19.04257960202172 37 22.494812023374543 31.348587469922467 26.78396374145416 19.37263676524883 38 21.66505404407552 33.88353469897004 22.359701834570384 22.09170942238405 39 21.64579805721415 31.37261766840236 26.071492227583487 20.910092046800006 40 24.808235833322723 25.676505786344485 23.880129094682164 25.63512928565063 41 18.178447299069347 23.32807109119381 26.794785287789473 31.698696321947367 42 23.303245190777496 24.70590856429908 23.722420970883675 28.26842527403975 43 23.072014208053776 24.910403961959084 25.51195462589278 26.505627204094363 44 20.32970705437509 29.408029587380803 27.331406673711285 22.930856684532827 45 18.02201229836913 35.176232064878356 23.035093638203875 23.766661998548642 46 24.14923548957949 30.192114275529303 25.427291939857668 20.231358295033548 47 22.70360421149121 25.63433358371421 26.25338969024915 25.408672514545433 48 24.423752657644467 22.320712439685796 30.530924160057037 22.724610742612704 49 22.756597960456794 21.51991801087247 31.79243001005767 23.93105401861306 50 20.427419252167493 31.109876888996396 26.671451487644337 21.79125237119177 51 18.912721045997937 31.967643576457405 23.96574662304098 25.153888754503672 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 925.0 1 994.5 2 1064.0 3 3312.0 4 5560.0 5 3943.5 6 2327.0 7 2651.5 8 2976.0 9 3328.0 10 3680.0 11 3909.5 12 4139.0 13 3986.0 14 3833.0 15 3744.0 16 3655.0 17 3425.0 18 3195.0 19 3226.5 20 3258.0 21 3095.0 22 2932.0 23 2840.0 24 2748.0 25 2511.5 26 2349.0 27 2423.0 28 2911.0 29 3399.0 30 4741.0 31 6083.0 32 7108.5 33 8134.0 34 8914.5 35 9695.0 36 11215.0 37 12735.0 38 15318.5 39 17902.0 40 27064.0 41 36226.0 42 46569.0 43 56912.0 44 59719.5 45 62527.0 46 61353.0 47 60179.0 48 59493.0 49 58807.0 50 53977.0 51 49147.0 52 45263.5 53 41380.0 54 38479.0 55 35578.0 56 31189.0 57 26800.0 58 24671.5 59 22543.0 60 20713.5 61 18884.0 62 17249.0 63 15614.0 64 13891.0 65 12168.0 66 10821.5 67 9475.0 68 7897.5 69 6320.0 70 5562.5 71 4805.0 72 4090.5 73 3376.0 74 2756.0 75 1730.5 76 1325.0 77 987.5 78 650.0 79 500.5 80 351.0 81 244.0 82 137.0 83 112.0 84 87.0 85 46.0 86 5.0 87 4.5 88 4.0 89 2.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 628376.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.104526282577904 #Duplication Level Percentage of deduplicated Percentage of total 1 80.70910810974974 20.261639257846337 2 6.478076258511961 3.2525807138471494 3 2.2886800340490194 1.7236868420158473 4 1.253389267612412 1.2586297524430747 5 0.783910382429608 0.9839849399444895 6 0.5374479997045996 0.8095426460461826 7 0.407217589523726 0.715610327524848 8 0.3035287844060544 0.6095957076512571 9 0.2640589720754582 0.596616786415696 >10 5.019482019723593 33.102765717840455 >50 1.815404557735582 30.677544930207596 >100 0.13518970110796888 4.692434014406085 >500 0.0032188024073325923 0.5318684464064207 >1k 0.001287520962933037 0.7834999174045358 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3394 0.5401224744420537 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1454 0.23139012311100363 No Hit GAGCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCT 766 0.12190153665957962 No Hit AAGCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCT 673 0.1071014806421633 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 656 0.1043960940583345 No Hit GAGAGCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTT 635 0.10105414592536952 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07193145505238902 0.0 2 0.0 0.0 0.0 0.25064610997237324 0.0 3 0.0 0.0 0.0 0.38559715838924463 0.0 4 0.0 0.0 0.0 0.81448050211975 0.0 5 0.0 0.0 0.0 1.2778973098908935 0.0 6 0.0 0.0 0.0 2.162717863190192 0.0 7 0.0 0.0 0.0 2.5147363998625027 0.0 8 0.0 0.0 0.0 3.503793906832852 0.0 9 0.0 0.0 0.0 3.9080104905343296 0.0 10 1.591403872840465E-4 0.0 0.0 4.525952614358283 0.0 11 1.591403872840465E-4 0.0 0.0 5.04459113651699 0.0 12 1.591403872840465E-4 0.0 0.0 5.500528346085783 0.0 13 1.591403872840465E-4 0.0 0.0 5.701840936000102 0.0 14 1.591403872840465E-4 0.0 0.0 5.77647777763632 0.0 15 1.591403872840465E-4 0.0 0.0 5.860981323284149 0.0 16 1.591403872840465E-4 0.0 0.0 6.051313226475868 0.0 17 1.591403872840465E-4 0.0 0.0 6.237666619985486 0.0 18 1.591403872840465E-4 0.0 0.0 6.55515169261716 0.0 19 1.591403872840465E-4 0.0 0.0 6.665435981005003 0.0 20 1.591403872840465E-4 0.0 0.0 6.793384852381377 0.0 21 1.591403872840465E-4 0.0 0.0 6.956503749347524 0.0 22 1.591403872840465E-4 0.0 0.0 7.113416171209594 0.0 23 1.591403872840465E-4 0.0 0.0 7.315047041898481 0.0 24 6.36561549136186E-4 0.0 0.0 7.459864794326964 0.0 25 6.36561549136186E-4 0.0 0.0 7.577946961691726 0.0 26 6.36561549136186E-4 0.0 0.0 7.698416234865749 0.0 27 6.36561549136186E-4 0.0 0.0 7.807745680929889 0.0 28 6.36561549136186E-4 0.0 0.0 7.909754669178963 0.0 29 6.36561549136186E-4 0.0 0.0 8.025768011509033 0.0 30 6.36561549136186E-4 0.0 0.0 8.199231033648644 0.0 31 6.36561549136186E-4 0.0 0.0 8.343571364915274 0.0 32 6.36561549136186E-4 0.0 0.0 8.469769692031523 0.0 33 6.36561549136186E-4 0.0 0.0 8.59708200185876 0.0 34 6.36561549136186E-4 0.0 0.0 8.729486804079086 0.0 35 6.36561549136186E-4 0.0 0.0 8.915681057201422 0.0 36 7.957019364202325E-4 0.0 0.0 9.057156861496939 0.0 37 7.957019364202325E-4 0.0 0.0 9.19879180617974 0.0 38 7.957019364202325E-4 0.0 0.0 9.324035290972285 0.0 39 7.957019364202325E-4 0.0 0.0 9.454689548932487 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 25 3.8887792E-5 45.000004 1 CTAGACG 30 2.1639244E-6 45.000004 1 TTAGACG 25 3.8887792E-5 45.000004 1 TGGCGTA 30 2.1639244E-6 45.000004 19 CAGCACG 30 2.1639244E-6 45.000004 1 AATGCGG 120 0.0 45.000004 2 TACGAAT 30 2.1639244E-6 45.000004 12 AGTTATG 60 0.0 45.000004 1 TATAGCG 30 2.1639244E-6 45.000004 1 GCATCGA 25 3.8887792E-5 45.000004 9 TAGTATG 55 1.8189894E-12 45.000004 1 TAGTAAG 45 3.8380676E-10 45.000004 1 CTTACGA 25 3.8887792E-5 45.000004 35 ATTTACG 20 7.0308434E-4 45.0 1 AGGTACG 20 7.0308434E-4 45.0 1 CGAACAG 20 7.0308434E-4 45.0 35 CAACGTT 20 7.0308434E-4 45.0 42 ACGTTAT 20 7.0308434E-4 45.0 44 GCAACTA 20 7.0308434E-4 45.0 26 GTTTACG 35 1.2107557E-7 45.0 1 >>END_MODULE