##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547099_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 423453 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50921826035003 31.0 31.0 33.0 30.0 34.0 2 31.864074643466925 31.0 31.0 34.0 30.0 34.0 3 31.808788696738482 31.0 31.0 34.0 30.0 34.0 4 35.669429665157644 37.0 35.0 37.0 33.0 37.0 5 35.641188042120376 37.0 35.0 37.0 33.0 37.0 6 35.70227628567987 37.0 35.0 37.0 33.0 37.0 7 36.094565394506596 37.0 35.0 37.0 35.0 37.0 8 34.79542711942057 37.0 35.0 37.0 35.0 37.0 9 37.12097210316139 39.0 37.0 39.0 34.0 39.0 10 36.95692556198681 39.0 37.0 39.0 32.0 39.0 11 36.91297027060855 39.0 37.0 39.0 33.0 39.0 12 36.77861297475753 39.0 35.0 39.0 33.0 39.0 13 36.76375418287272 39.0 35.0 39.0 33.0 39.0 14 37.940163371141544 40.0 37.0 41.0 33.0 41.0 15 38.05941155216754 40.0 37.0 41.0 33.0 41.0 16 38.07502367441015 40.0 36.0 41.0 33.0 41.0 17 37.982517540317346 40.0 36.0 41.0 33.0 41.0 18 37.78932254583153 39.0 36.0 41.0 33.0 41.0 19 37.58819042491138 39.0 36.0 41.0 33.0 41.0 20 37.32004496366775 39.0 35.0 41.0 33.0 41.0 21 37.250509501644814 39.0 35.0 41.0 33.0 41.0 22 37.1710815604093 39.0 35.0 41.0 32.0 41.0 23 37.08408489253825 39.0 35.0 41.0 32.0 41.0 24 36.91164072518083 38.0 35.0 41.0 32.0 41.0 25 36.835034820865594 38.0 35.0 41.0 32.0 41.0 26 36.755734402637366 38.0 35.0 41.0 32.0 41.0 27 36.64295447192487 38.0 35.0 41.0 31.0 41.0 28 36.61582985596985 38.0 35.0 40.0 31.0 41.0 29 36.531582017366745 38.0 35.0 40.0 31.0 41.0 30 36.42119196227208 38.0 35.0 40.0 31.0 41.0 31 36.225174930866 38.0 35.0 40.0 31.0 41.0 32 35.90105867711411 38.0 35.0 41.0 30.0 41.0 33 35.51272750458729 38.0 35.0 41.0 27.0 41.0 34 35.10785848724652 38.0 35.0 41.0 24.0 41.0 35 34.80617211355215 38.0 34.0 41.0 22.0 41.0 36 34.61437042599769 38.0 34.0 41.0 21.0 41.0 37 34.530382356483486 38.0 34.0 40.0 20.0 41.0 38 34.43642860010438 38.0 34.0 40.0 20.0 41.0 39 34.33657808540735 38.0 34.0 40.0 18.0 41.0 40 34.21532023624818 38.0 34.0 40.0 18.0 41.0 41 34.13966130833882 38.0 34.0 40.0 18.0 41.0 42 34.0478258508028 38.0 34.0 40.0 18.0 41.0 43 33.96273730496655 37.0 33.0 40.0 18.0 41.0 44 33.832902352799486 37.0 33.0 40.0 17.0 41.0 45 33.72661428777219 37.0 33.0 40.0 18.0 41.0 46 33.65299100490491 37.0 33.0 40.0 17.0 41.0 47 33.58534004954505 37.0 33.0 40.0 17.0 41.0 48 33.49792066652025 37.0 33.0 40.0 17.0 41.0 49 33.417701610332195 36.0 33.0 40.0 15.0 41.0 50 33.32641402942003 36.0 33.0 40.0 15.0 41.0 51 33.00579521221954 36.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 1.0 14 4.0 15 17.0 16 36.0 17 96.0 18 187.0 19 412.0 20 753.0 21 1178.0 22 1846.0 23 2753.0 24 4333.0 25 7210.0 26 10276.0 27 11177.0 28 10122.0 29 9518.0 30 9937.0 31 11468.0 32 13463.0 33 17107.0 34 26720.0 35 42208.0 36 34921.0 37 41674.0 38 59150.0 39 106803.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.45285545267125 22.853303672426456 26.125685731356253 21.568155143546036 2 38.087816121269654 23.65008631418363 26.255097968369572 12.006999596177144 3 25.686203663688765 23.927094624432936 38.46117514812742 11.925526563750877 4 22.29527243873582 26.54415011819494 37.530729502447734 13.62984794062151 5 20.29788429884781 29.923037503571827 36.5913100155153 13.18776818206507 6 18.70549978391935 38.14779916543276 33.476914793377304 9.669786257270582 7 80.63374211541777 3.088890620682815 14.758662708730366 1.5187045551690508 8 78.72727315664312 5.444051642094872 13.962824681841903 1.8658505194201007 9 76.4297336422224 4.779042774522792 16.210299608220982 2.580923975033829 10 33.506434008024506 28.540357489497065 26.23738643958125 11.715822062897182 11 27.000162946064854 24.718681884412202 32.368881552380074 15.912273617142873 12 25.092985526138673 22.99145359697534 34.76395255199514 17.151608324890837 13 20.432728071356205 27.83638325859068 35.74564355430236 15.985245115750747 14 18.06953782356011 30.51625564112192 35.24877613336073 16.16543040195724 15 17.336044378006534 25.242470829112087 41.1332544579918 16.288230334889587 16 18.78555589404255 23.913397708836637 40.22028418738326 17.080762209737564 17 19.001872698977216 23.740533187862646 35.12857389131734 22.1290202218428 18 20.163985141208116 24.86745872623408 37.0685766779312 17.899979454626607 19 22.352893945727153 27.03747523337891 32.87472281457446 17.734908006319476 20 23.84373236226925 26.403402502757096 32.060700951463325 17.692164183510332 21 21.55138822962643 27.455703466500413 34.05242140213908 16.94048690173408 22 21.314998358731664 24.875724106335294 33.31420488224195 20.49507265269109 23 18.87529430657003 28.4914736700413 32.790888244976415 19.842343778412243 24 18.623082136624372 27.203255142837573 37.452562622061954 16.7211000984761 25 19.173084143930968 27.720667937173666 35.03340394329477 18.0728439756006 26 18.247833880029187 30.362991878673668 32.417293064401484 18.971881176895664 27 17.908953295879353 28.98645186124552 34.15349519309109 18.951099649784037 28 17.119727573071863 28.486278288263396 36.69002226929553 17.70397186936921 29 17.680828805085806 26.84123149440434 36.24345559011272 19.23448411039714 30 18.5985221500379 28.926704970799594 35.022068564870246 17.45270431429226 31 21.34404526594451 28.882544225687383 31.989146375158516 17.784264133209586 32 21.44771674778547 28.462190609111282 32.0356686574425 18.054423985660748 33 21.250292240225008 29.131686397309736 30.594894828942053 19.0231265335232 34 18.80208665424498 29.60352152423055 31.66018424713014 19.934207574394325 35 19.588006225011984 29.162858687977177 31.36404748578945 19.88508760122139 36 22.630374563410815 30.227675798730907 28.675437415722644 18.466512222135634 37 19.530148564303477 31.297452137545374 30.65794787142847 18.514451426722683 38 20.202950504542414 31.7955003270729 29.317775526445672 18.683773641939013 39 20.179571286541837 31.13474222641002 28.479429830465246 20.2062566565829 40 21.050270041775594 29.483791589621518 29.411292398447998 20.054645970154894 41 19.24251333678118 29.04525413682274 29.5640838534619 22.148148672934187 42 20.26623970074601 30.751228589713612 28.189196912053994 20.79333479748638 43 20.196338200461444 29.54023232802696 29.942874415814742 20.320555055696854 44 20.210979730926454 30.797750871997604 29.15364869300725 19.83762070406869 45 19.109558794010198 31.797625710527495 28.149759241285338 20.94305625417697 46 20.822145550982047 30.53042486415257 28.72172354428945 19.925706040575932 47 19.99230138882001 30.979116926789985 29.27574016478807 19.752841519601937 48 20.205075887997015 29.748992214011942 30.09472125595993 19.95121064203111 49 19.792515344087775 28.89364345039473 30.353545729986564 20.960295475530934 50 19.499212427353214 30.518144870859338 30.493584884272874 19.489057817514578 51 18.82334048879096 31.307134439949653 29.233940956847633 20.635584114411753 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 553.0 1 616.0 2 679.0 3 7745.0 4 14811.0 5 9696.5 6 4582.0 7 4710.0 8 4838.0 9 5263.0 10 5688.0 11 6040.5 12 6393.0 13 6552.0 14 6711.0 15 6473.5 16 6236.0 17 5874.0 18 5512.0 19 5199.5 20 4887.0 21 4612.5 22 4338.0 23 4220.0 24 4102.0 25 4248.0 26 4744.5 27 5095.0 28 5383.0 29 5671.0 30 6346.5 31 7022.0 32 8075.0 33 9128.0 34 10638.0 35 12148.0 36 13331.5 37 14515.0 38 15829.0 39 17143.0 40 19547.0 41 21951.0 42 24022.0 43 26093.0 44 28001.5 45 29910.0 46 31444.5 47 32979.0 48 33052.5 49 33126.0 50 31179.5 51 29233.0 52 26785.0 53 24337.0 54 21606.5 55 18876.0 56 17322.5 57 15769.0 58 14264.0 59 12759.0 60 11500.5 61 10242.0 62 8976.5 63 7711.0 64 6719.0 65 5727.0 66 4802.5 67 3878.0 68 3104.5 69 2331.0 70 1989.5 71 1648.0 72 1303.0 73 958.0 74 802.0 75 555.0 76 464.0 77 327.5 78 191.0 79 141.5 80 92.0 81 68.0 82 44.0 83 33.0 84 22.0 85 16.5 86 11.0 87 8.0 88 5.0 89 3.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 423453.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.83835765189699 #Duplication Level Percentage of deduplicated Percentage of total 1 73.90459782447094 34.61569985022179 2 9.504222493922814 8.903243447471223 3 4.443777549048751 6.244177265034469 4 2.739116935783052 5.13182954754299 5 1.8880044205071242 4.421551314803761 6 1.4273931283821735 4.011404991421462 7 1.1487618320277635 3.7664282281755357 8 0.8791433151278523 3.2942103216986185 9 0.7509083086361665 3.1654180731313644 >10 3.2814501798201166 21.833459220284134 >50 0.019370507287224288 0.6451257857063489 >100 0.01172425441068704 1.1613219177185077 >500 0.0010195003835380034 0.2814964105654031 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 5.097501917690017E-4 2.524633626224404 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10574 2.497089405435786 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTT 647 0.15279145501389765 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 532 0.12563377753847535 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 456 0.10768609503297887 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07745841923424795 0.0 2 0.0 0.0 0.0 0.23355602628863179 0.0 3 0.0 0.0 0.0 0.3981551671614087 0.0 4 0.0 0.0 0.0 0.5618096931654752 0.0 5 0.0 0.0 0.0 0.9642156272360806 0.0 6 0.0 0.0 0.0 1.6450467938590587 0.0 7 0.0 0.0 0.0 2.0080150571610074 0.0 8 0.0 0.0 0.0 2.5259001589314516 0.0 9 0.0 0.0 0.0 2.847305368010145 0.0 10 0.0 0.0 0.0 3.260102065636564 0.0 11 0.0 0.0 0.0 3.674315685566049 0.0 12 0.0 0.0 0.0 3.9985547392508733 0.0 13 0.0 0.0 0.0 4.218413849943205 0.0 14 0.0 0.0 0.0 4.336490708531998 0.0 15 0.0 0.0 0.0 4.442759881261911 0.0 16 0.0 0.0 0.0 4.620347476579455 0.0 17 0.0 0.0 0.0 4.809270450321523 0.0 18 0.0 0.0 0.0 5.053453393883147 0.0 19 0.0 0.0 0.0 5.187588705240015 0.0 20 0.0 0.0 0.0 5.3325870875870525 0.0 21 0.0 0.0 0.0 5.492699307833455 0.0 22 0.0 0.0 0.0 5.667216904827691 0.0 23 0.0 0.0 0.0 5.864641412388152 0.0 24 0.0 0.0 0.0 6.018377482270759 0.0 25 0.0 0.0 0.0 6.1510958713245625 0.0 26 0.0 0.0 0.0 6.284522721529898 0.0 27 0.0 0.0 0.0 6.42999341131129 0.0 28 0.0 0.0 0.0 6.573338717638085 0.0 29 0.0 0.0 0.0 6.718809407419477 0.0 30 0.0 0.0 0.0 6.918831605868892 0.0 31 0.0 0.0 0.0 7.078707672398117 0.0 32 0.0 0.0 0.0 7.245196043008315 0.0 33 0.0 0.0 0.0 7.404599802103185 0.0 34 0.0 0.0 0.0 7.571560480147737 0.0 35 0.0 0.0 0.0 7.753871149808834 0.0 36 0.0 0.0 0.0 7.922248750156452 0.0 37 0.0 0.0 0.0 8.095113271130444 0.0 38 0.0 0.0 0.0 8.282147015135092 0.0 39 0.0 0.0 0.0 8.46705537568514 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 35 1.2095006E-7 45.0 6 CGGGTAA 20 7.028235E-4 45.0 6 TCGTTAG 20 7.028235E-4 45.0 1 TCTAACG 20 7.028235E-4 45.0 25 TCGTCGC 35 1.2095006E-7 45.0 26 AATTACG 20 7.028235E-4 45.0 1 TTCGAAT 35 1.2095006E-7 45.0 16 AGTACGG 40 6.7975634E-9 45.0 2 GTACGGG 90 0.0 45.0 3 TAGTACG 20 7.028235E-4 45.0 1 CTACGAA 30 2.1622436E-6 44.999996 11 TACGAAT 30 2.1622436E-6 44.999996 12 TACGAAG 30 2.1622436E-6 44.999996 1 CGTTTTT 5165 0.0 43.998062 1 ATACTAT 265 0.0 41.60377 45 TACGGGT 60 3.6379788E-12 41.249996 4 TAGGGCG 240 0.0 41.249996 5 GCTTGTC 220 0.0 40.909092 38 TGGGCGA 220 0.0 40.909092 6 AGGGCGA 545 0.0 40.04587 6 >>END_MODULE