##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547096_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 949248 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47819431802859 31.0 31.0 33.0 30.0 34.0 2 31.85863230683657 31.0 31.0 34.0 30.0 34.0 3 31.928852101874327 33.0 31.0 34.0 30.0 34.0 4 35.7304213440534 37.0 35.0 37.0 33.0 37.0 5 35.69003779834142 37.0 35.0 37.0 33.0 37.0 6 35.74108346817692 37.0 35.0 37.0 33.0 37.0 7 36.051166818365694 37.0 35.0 37.0 35.0 37.0 8 34.73807371730043 37.0 35.0 37.0 33.0 37.0 9 37.05662060915588 39.0 37.0 39.0 34.0 39.0 10 36.84030727481122 39.0 37.0 39.0 32.0 39.0 11 36.90462766316073 39.0 37.0 39.0 33.0 39.0 12 36.791068298274006 39.0 35.0 39.0 33.0 39.0 13 36.81126849885383 39.0 35.0 39.0 33.0 39.0 14 37.955763931027505 40.0 37.0 41.0 33.0 41.0 15 38.06086186117853 40.0 37.0 41.0 33.0 41.0 16 38.05408070388349 40.0 37.0 41.0 33.0 41.0 17 37.9424670897384 40.0 36.0 41.0 33.0 41.0 18 37.832240889630526 39.0 36.0 41.0 33.0 41.0 19 37.70567333299623 39.0 36.0 41.0 33.0 41.0 20 37.53565875303398 39.0 35.0 41.0 33.0 41.0 21 37.44986768473571 39.0 35.0 41.0 33.0 41.0 22 37.3755277862055 39.0 35.0 41.0 32.0 41.0 23 37.28911728020496 39.0 35.0 41.0 32.0 41.0 24 37.15919759641316 39.0 35.0 41.0 32.0 41.0 25 37.05612021305286 39.0 35.0 41.0 32.0 41.0 26 36.973969921453616 39.0 35.0 41.0 32.0 41.0 27 36.87617566747573 39.0 35.0 41.0 31.0 41.0 28 36.87838794498382 39.0 35.0 41.0 31.0 41.0 29 36.828292501011326 39.0 35.0 41.0 31.0 41.0 30 36.737810350930424 39.0 35.0 41.0 31.0 41.0 31 36.61576426813646 39.0 35.0 41.0 31.0 41.0 32 36.43315866875674 39.0 35.0 41.0 30.0 41.0 33 36.17515022417746 39.0 35.0 41.0 30.0 41.0 34 35.88499844087109 39.0 35.0 41.0 27.0 41.0 35 35.677640616572276 39.0 35.0 41.0 26.0 41.0 36 35.5430424925836 39.0 35.0 41.0 25.0 41.0 37 35.50176455467907 39.0 35.0 41.0 25.0 41.0 38 35.37655280811758 38.0 35.0 41.0 25.0 41.0 39 35.28935009607605 38.0 35.0 41.0 24.0 41.0 40 35.1673724885383 38.0 35.0 41.0 24.0 41.0 41 35.05733591221683 38.0 34.0 41.0 23.0 41.0 42 34.984284401968715 38.0 34.0 41.0 23.0 41.0 43 34.903467797667204 38.0 34.0 40.0 23.0 41.0 44 34.78198110504315 38.0 34.0 40.0 23.0 41.0 45 34.6704917998247 38.0 34.0 40.0 23.0 41.0 46 34.60293200512405 38.0 34.0 40.0 23.0 41.0 47 34.54715627528317 38.0 34.0 40.0 23.0 41.0 48 34.46190458131068 37.0 34.0 40.0 23.0 41.0 49 34.380279968985974 37.0 34.0 40.0 23.0 41.0 50 34.31241466929612 37.0 34.0 40.0 23.0 41.0 51 33.96730675229234 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 2.0 13 8.0 14 12.0 15 17.0 16 71.0 17 154.0 18 343.0 19 725.0 20 1353.0 21 2150.0 22 3238.0 23 4927.0 24 7444.0 25 11918.0 26 17060.0 27 19534.0 28 19858.0 29 19783.0 30 21398.0 31 25080.0 32 30154.0 33 38374.0 34 59729.0 35 83638.0 36 74206.0 37 97071.0 38 145435.0 39 265392.0 40 169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.23314876618123 23.521671891855448 25.146853087918014 18.098326254045308 2 35.31132011866235 24.327783677184467 27.407800701186623 12.953095502966558 3 28.286601604638616 24.813325916936353 33.76693972491909 13.133132753505933 4 24.222015742988134 27.740906485976268 33.35798442556634 14.679093345469255 5 22.121194882686083 31.20649187567422 32.620242549892126 14.052070691747574 6 20.81352818230852 39.56500303398058 29.71457406283711 9.906894720873787 7 85.33786744875944 2.989840378910464 10.181322478425027 1.4909696939050703 8 82.94755427454153 5.333379685814455 9.844634911003237 1.8744311286407769 9 79.79621763754045 4.148336367313916 13.104583838996763 2.9508621561488675 10 33.99585777373247 23.4497201995685 29.43624848300971 13.118173543689322 11 30.699142900485437 25.207216659924487 27.219335726806904 16.87430471278317 12 26.416384337918014 23.495967334142396 31.113892259978428 18.973756067961165 13 23.202261158306364 25.394522822276162 32.61455383629989 18.788662183117584 14 21.23997100862999 26.591786340345198 33.61587277508091 18.552369875943906 15 21.506708468176917 23.557068331984897 36.51532581580367 18.42089738403452 16 23.660202602481125 22.60768524137001 35.0975719727616 18.634540183387273 17 23.03612965210356 22.919932409654802 32.34971261461704 21.694225323624593 18 24.307241100323623 22.546478896979504 33.383794329827396 19.76248567286947 19 25.328575883225458 25.003055049892126 30.365405036407765 19.302964030474648 20 26.72062516855448 24.604423712243797 29.86890675566343 18.806044363538295 21 25.35006657901834 25.210798442556637 31.419818635382956 18.01931634304207 22 24.4335516113808 22.71218901699029 31.664960052589 21.189299319039915 23 22.35211451591154 25.811589805825243 31.25779564455232 20.578500033710895 24 22.154379045307444 24.257201490021572 34.10626095604099 19.48215850862999 25 22.483060275080906 25.209850323624593 32.05474228020496 20.252347121089535 26 21.441288261866234 26.047039340614887 31.38695051240561 21.124721885113267 27 21.084058117583602 25.1196736785329 32.18695219795038 21.609316005933117 28 20.06714788969795 26.31419818635383 33.31363352885653 20.305020395091695 29 21.691802353020496 25.038451490021572 32.57799858414239 20.691747572815533 30 21.92925347222222 25.32109627831715 33.03141012675297 19.71824012270766 31 24.05493611785329 25.470056297195253 30.624030811758363 19.850976773193096 32 24.41985656014024 25.459205602750814 30.525005056634303 19.595932780474648 33 23.940740459816613 25.887123280744333 29.308463120280475 20.863673139158575 34 21.199833973840345 27.275380090345198 31.20238336030205 20.322402575512406 35 21.701494235436893 27.55233616504854 30.54217654395901 20.203993055555554 36 23.943584816612727 28.462951725997844 28.06716474514563 19.526298712243797 37 22.477582254584682 28.499401631607334 28.59737392125135 20.425642192556634 38 22.848507450107874 28.344858245685007 28.475698658306364 20.330935645900755 39 22.744846446871627 27.560974581984897 27.85373263888889 21.840446332254583 40 23.825596682847898 26.053676173139156 29.029400114617044 21.091327029395902 41 21.320877157497304 26.552597424487594 29.048889225997844 23.07763619201726 42 22.60347137944984 27.149596312028045 27.824656991639696 22.422275316882416 43 22.19925667475728 26.058732807443363 29.19869201725998 22.543318500539375 44 21.951270900755123 26.649937634843578 29.371249662891046 22.027541801510246 45 21.634388484358144 27.281911576321466 28.85831732065804 22.22538261866235 46 22.268996089536138 27.09692303802589 29.132955771305287 21.501125101132686 47 21.971602784519956 26.917412520226534 29.521263147249186 21.589721548004313 48 21.845397620010786 26.346539576591155 30.20285531283711 21.60520749056095 49 22.081689927184467 26.23192253236246 30.15818837648328 21.528199163969795 50 21.524301341693636 26.91973014428263 29.990265978964402 21.56570253505933 51 21.379765877831716 27.043617684735704 29.418655609492987 22.15796082793959 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 653.0 1 1062.0 2 1471.0 3 10457.5 4 19444.0 5 13485.5 6 7527.0 7 7440.5 8 7354.0 9 7480.5 10 7607.0 11 7536.0 12 7465.0 13 7293.0 14 7121.0 15 6818.5 16 6516.0 17 6252.0 18 5988.0 19 5680.5 20 5373.0 21 5410.5 22 5448.0 23 5628.5 24 5809.0 25 6478.5 26 8286.0 27 9424.0 28 11149.5 29 12875.0 30 14928.5 31 16982.0 32 19297.5 33 21613.0 34 24825.5 35 28038.0 36 30844.5 37 33651.0 38 36031.0 39 38411.0 40 42627.0 41 46843.0 42 50854.5 43 54866.0 44 56945.0 45 59024.0 46 62492.0 47 65960.0 48 67678.5 49 69397.0 50 67492.0 51 65587.0 52 62664.0 53 59741.0 54 56528.5 55 53316.0 56 49896.0 57 46476.0 58 43382.5 59 40289.0 60 37579.0 61 34869.0 62 31322.5 63 27776.0 64 24748.5 65 21721.0 66 18334.0 67 14947.0 68 12733.5 69 10520.0 70 9430.0 71 8340.0 72 6919.0 73 5498.0 74 4617.0 75 3010.0 76 2284.0 77 1720.0 78 1156.0 79 860.5 80 565.0 81 407.5 82 250.0 83 169.5 84 89.0 85 61.5 86 34.0 87 29.5 88 25.0 89 18.5 90 12.0 91 8.0 92 4.0 93 2.5 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 949248.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.32632297399886 #Duplication Level Percentage of deduplicated Percentage of total 1 70.58954931352574 24.230796683251043 2 7.269155513492918 4.990467598087649 3 3.9370532790810953 4.054336872707369 4 2.7976031044309053 3.8412571086302854 5 2.1328005406977493 3.660560009955518 6 1.7125899744817332 3.527214995165547 7 1.5084635627612677 3.624600521489659 8 1.2981171813111307 3.564767169902633 9 1.103151906277597 3.408043376184059 >10 7.600673015722137 42.122655634279674 >50 0.03452284429182753 0.8008719372234463 >100 0.016005922311949004 1.018697584687742 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.138416139205934E-4 1.1557305084353633 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10728 1.1301577669902914 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.034448321197411 0.0 2 0.0 0.0 0.0 0.0920728829557713 0.0 3 0.0 0.0 0.0 0.1700293284789644 0.0 4 0.0 0.0 0.0 0.25946854773462785 0.0 5 0.0 0.0 0.0 0.41422262675296656 0.0 6 0.0 0.0 0.0 0.827075748381877 0.0 7 0.0 0.0 0.0 1.0345031014023733 0.0 8 0.0 0.0 0.0 1.4985546453613807 0.0 9 0.0 0.0 0.0 1.7760374528047465 0.0 10 0.0 0.0 0.0 2.1659250269687162 0.0 11 0.0 0.0 0.0 2.4435131809600863 0.0 12 0.0 0.0 0.0 2.686126281014024 0.0 13 0.0 0.0 0.0 2.834664913700108 0.0 14 0.0 0.0 0.0 2.9275805690399137 0.0 15 0.0 0.0 0.0 3.0003750337108954 0.0 16 0.0 0.0 0.0 3.1145706917475726 0.0 17 0.0 0.0 0.0 3.232348132416397 0.0 18 0.0 0.0 0.0 3.3836257753505934 0.0 19 0.0 0.0 0.0 3.4732756877022655 0.0 20 0.0 0.0 0.0 3.5599758967098167 0.0 21 0.0 0.0 0.0 3.6742769012944985 0.0 22 0.0 0.0 0.0 3.792897114347357 0.0 23 0.0 0.0 0.0 3.9206824770765913 0.0 24 0.0 0.0 0.0 4.033297936893204 0.0 25 0.0 0.0 0.0 4.136432207389428 0.0 26 0.0 0.0 0.0 4.241568062297735 0.0 27 0.0 0.0 0.0 4.356817185814455 0.0 28 0.0 0.0 0.0 4.47290908171521 0.0 29 0.0 0.0 0.0 4.594900384304207 0.0 30 0.0 0.0 0.0 4.758503573354909 0.0 31 0.0 0.0 0.0 4.880810915587918 0.0 32 0.0 0.0 0.0 5.014706378101402 0.0 33 0.0 0.0 0.0 5.1536584749190935 0.0 34 0.0 0.0 0.0 5.289766214940669 0.0 35 0.0 0.0 0.0 5.43798880798274 0.0 36 0.0 0.0 0.0 5.569250606796117 0.0 37 0.0 0.0 0.0 5.712205872437972 0.0 38 0.0 0.0 0.0 5.88476351806904 0.0 39 0.0 0.0 0.0 6.123373449298813 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 30 2.1651013E-6 45.000004 21 CGTTTTT 6975 0.0 42.322582 1 ACGTTAG 65 0.0 41.53846 1 GCGATCG 110 0.0 40.909092 9 CGTTAGG 165 0.0 39.545456 2 CACAACG 230 0.0 39.130436 12 GGGCGAT 2230 0.0 38.643494 7 CTATGCG 35 6.247137E-6 38.57143 1 CGAGGGT 350 0.0 38.571426 4 GCCGATT 65 9.094947E-12 38.07692 9 GCGATAT 130 0.0 38.07692 9 ATTGGGC 315 0.0 37.857143 4 ACAACGA 245 0.0 37.65306 13 TCTAGCG 30 1.139772E-4 37.500004 1 CTACGAA 30 1.139772E-4 37.500004 11 TATAGCG 30 1.139772E-4 37.500004 1 AGGGTAC 655 0.0 37.44275 6 AAGGGTA 795 0.0 37.35849 5 AGGGCGA 1240 0.0 37.197582 6 GGCGATA 480 0.0 37.031254 8 >>END_MODULE