##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547094_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 768589 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42795434230779 31.0 31.0 33.0 30.0 34.0 2 31.79396660633967 31.0 31.0 34.0 30.0 34.0 3 31.830423021927192 31.0 31.0 34.0 30.0 34.0 4 35.65148473371334 37.0 35.0 37.0 33.0 37.0 5 35.61015835511567 37.0 35.0 37.0 33.0 37.0 6 35.65427426101596 37.0 35.0 37.0 33.0 37.0 7 35.991532535594445 37.0 35.0 37.0 35.0 37.0 8 34.67687411607504 37.0 35.0 37.0 33.0 37.0 9 36.99313156966858 39.0 37.0 39.0 34.0 39.0 10 36.912027104213045 39.0 37.0 39.0 32.0 39.0 11 36.85029710287293 39.0 37.0 39.0 32.0 39.0 12 36.68016846454997 39.0 35.0 39.0 32.0 39.0 13 36.67215768115339 39.0 35.0 39.0 32.0 39.0 14 37.79704107136584 40.0 36.0 41.0 33.0 41.0 15 37.909236275824924 40.0 36.0 41.0 33.0 41.0 16 37.9278444005834 40.0 36.0 41.0 33.0 41.0 17 37.790905152168456 40.0 36.0 41.0 33.0 41.0 18 37.6513181947699 39.0 36.0 41.0 33.0 41.0 19 37.51682628817222 39.0 36.0 41.0 32.0 41.0 20 37.30391665766749 39.0 35.0 41.0 32.0 41.0 21 37.18697379223486 39.0 35.0 41.0 32.0 41.0 22 37.09374190887458 39.0 35.0 41.0 32.0 41.0 23 36.98375985084356 39.0 35.0 41.0 31.0 41.0 24 36.79582065317094 38.0 35.0 41.0 31.0 41.0 25 36.677764058554054 38.0 35.0 41.0 31.0 41.0 26 36.57609463575461 38.0 35.0 40.0 31.0 41.0 27 36.47683872654956 38.0 35.0 40.0 31.0 41.0 28 36.4843889256807 38.0 35.0 40.0 31.0 41.0 29 36.426580396024406 38.0 35.0 40.0 30.0 41.0 30 36.349279003472596 38.0 35.0 40.0 30.0 41.0 31 36.21510586282135 38.0 35.0 40.0 30.0 41.0 32 36.01630780560222 38.0 35.0 41.0 30.0 41.0 33 35.728389295188975 38.0 35.0 41.0 27.0 41.0 34 35.40815051997882 38.0 35.0 41.0 25.0 41.0 35 35.17256557145627 38.0 34.0 41.0 24.0 41.0 36 34.98498287120945 38.0 34.0 40.0 23.0 41.0 37 34.92351438805395 38.0 34.0 40.0 23.0 41.0 38 34.77796585691442 38.0 34.0 40.0 23.0 41.0 39 34.64351168179612 38.0 34.0 40.0 23.0 41.0 40 34.481032125101976 37.0 34.0 40.0 22.0 41.0 41 34.33375445133875 37.0 33.0 40.0 22.0 41.0 42 34.23202647969201 37.0 33.0 40.0 22.0 41.0 43 34.11181398640886 37.0 33.0 40.0 21.0 41.0 44 33.968293847557014 37.0 33.0 40.0 21.0 41.0 45 33.82721714726596 36.0 33.0 40.0 20.0 41.0 46 33.75257517346722 36.0 33.0 40.0 20.0 41.0 47 33.67217979960681 36.0 33.0 40.0 20.0 41.0 48 33.59046642613933 35.0 33.0 40.0 20.0 41.0 49 33.49535837749434 35.0 33.0 40.0 20.0 41.0 50 33.40451919036052 35.0 33.0 40.0 20.0 41.0 51 33.05470413966372 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 5.0 13 8.0 14 9.0 15 23.0 16 65.0 17 149.0 18 366.0 19 800.0 20 1307.0 21 2079.0 22 3188.0 23 4650.0 24 7148.0 25 10744.0 26 15518.0 27 17708.0 28 18098.0 29 18068.0 30 19610.0 31 22694.0 32 27164.0 33 34313.0 34 52209.0 35 69718.0 36 66469.0 37 86324.0 38 120743.0 39 169304.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.074388262127094 22.490824094542074 24.919950714881427 18.514836928449405 2 36.40176999670825 23.554461487218788 25.95275238131173 14.091016134761231 3 28.670329656032028 24.341878429173462 34.024947013293186 12.962844901501322 4 24.72439756488839 26.932339650970803 32.64345443403431 15.699808350106496 5 22.183117374825816 31.323112873070002 31.911333625643874 14.582436126460305 6 20.713801524611984 39.29863685272623 29.77365015632542 10.213911466336365 7 82.86587499951209 3.3199798591965277 11.353532251957809 2.460612889333571 8 80.114599610455 5.805963915694864 11.57523722041299 2.5041992534371427 9 77.80712448395697 4.576828447974145 14.203950355781828 3.4120967122870614 10 40.25662610315786 27.578979142298422 19.026814070979416 13.137580683564298 11 30.77795805040145 27.218578460009184 26.53811074579522 15.465352743794147 12 26.530304232821443 21.743870911501464 31.035052544337745 20.69077231133935 13 24.350855919093302 23.61821467650461 31.936444575709515 20.094484828692575 14 22.980162349448143 24.00320587466123 32.685219278444 20.331412497446617 15 21.842623300619707 21.258956347280535 35.809906204746625 21.088514147353138 16 25.029632222162952 20.57406494238143 34.622145255786904 19.774157579668717 17 23.914601952408894 20.946695828329574 31.87386236336976 23.26483985589177 18 24.873111637038782 22.01957092802525 32.02218610987146 21.085131325064502 19 26.883418836335153 25.298566594109467 28.873038776251025 18.94497579330435 20 29.38423526748366 24.322752472387712 28.15132665182562 18.141685608303007 21 27.998188888990082 25.455347396332762 28.441859042999575 18.104604671677578 22 27.45888895105186 22.550543918791448 28.576131066148484 21.414436064008203 23 26.167821813739202 25.75810999116563 27.857151221263898 20.216916973831268 24 23.911479347219387 25.200334639189474 31.37918965793161 19.508996355659527 25 24.20292249824028 24.996974976222663 29.234090001288077 21.566012524248983 26 23.11859784618307 24.658952964458248 29.68738818796522 22.535061001393466 27 22.865406608733664 22.84042576721759 30.203528804081248 24.0906388199675 28 22.370603794745954 24.244817451199534 31.21304104013979 22.17153771391472 29 22.910554275431995 24.12837029934074 30.91639354713638 22.04468187809089 30 23.027391752939476 23.744940403778873 31.060553820052068 22.16711402322958 31 24.82874462163783 23.893914693028393 28.412324402248796 22.865016283084977 32 25.408898644138805 24.710345841535595 27.493237608136468 22.38751790618913 33 24.763430129757253 24.347212879705538 25.976952571530425 24.91240441900678 34 22.763531614425915 27.974509132969636 28.100584317496086 21.16137493510836 35 24.264463842183535 27.755016009857027 26.844126054367155 21.136394093592283 36 25.37507042125245 28.780401488962244 24.36920122458167 21.47532686520364 37 23.94856028384481 28.383049978597143 24.24780994783948 23.420579789718563 38 25.730266761559168 27.031612474287297 25.070616415275264 22.16750434887827 39 24.430612459975357 26.387184828302253 25.053311978183395 24.12889073353899 40 26.26149996942449 24.118742266673085 27.62881071678101 21.990947047121416 41 23.687172207772946 25.107957568999815 27.25839167617543 23.946478547051804 42 25.00803420293551 24.896661284509666 25.618763734583766 24.476540777971064 43 23.625370646730566 24.266805796075666 27.669664801343764 24.438158755850008 44 24.44102114394039 24.739750373736808 27.837895155928592 22.98133332639421 45 23.294114279543425 24.51049910940698 27.025887698106533 25.169498912943066 46 23.847205723735314 24.654008839574857 27.779216200075723 23.719569236614106 47 23.75378778514915 25.198903445144282 28.5112068999166 22.536101869789967 48 23.968857217576627 24.516353994137308 27.998579214638774 23.51620957364729 49 23.93008486980688 24.87220087719184 27.59368140839903 23.60403284460225 50 22.688719198427247 25.07412934611346 28.835567513976912 23.40158394148238 51 22.941520110227962 24.718542680158055 27.790925969536385 24.549011240077597 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 633.0 1 963.0 2 1293.0 3 9116.5 4 16940.0 5 11598.0 6 6256.0 7 6283.5 8 6311.0 9 6403.0 10 6495.0 11 6579.0 12 6663.0 13 6593.5 14 6524.0 15 6174.5 16 5825.0 17 5506.5 18 5188.0 19 4962.0 20 4736.0 21 4566.5 22 4397.0 23 4459.5 24 4522.0 25 4587.5 26 5166.0 27 5679.0 28 6266.5 29 6854.0 30 9271.5 31 11689.0 32 11439.5 33 11190.0 34 12681.0 35 14172.0 36 15715.5 37 17259.0 38 19214.5 39 21170.0 40 23555.5 41 25941.0 42 28231.5 43 30522.0 44 33796.0 45 37070.0 46 41074.0 47 45078.0 48 47869.0 49 50660.0 50 51029.5 51 51399.0 52 49398.0 53 47397.0 54 45840.5 55 44284.0 56 43043.0 57 41802.0 58 41778.5 59 41755.0 60 41394.0 61 41033.0 62 40406.5 63 39780.0 64 36590.0 65 33400.0 66 28983.5 67 24567.0 68 20121.5 69 15676.0 70 13292.0 71 10908.0 72 9160.5 73 7413.0 74 6313.5 75 4170.0 76 3126.0 77 2391.0 78 1656.0 79 1242.0 80 828.0 81 580.0 82 332.0 83 249.5 84 167.0 85 119.5 86 72.0 87 50.5 88 29.0 89 22.5 90 16.0 91 13.5 92 11.0 93 6.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 768589.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.69933052920877 #Duplication Level Percentage of deduplicated Percentage of total 1 68.27408489354725 26.42161377874645 2 8.243567189611559 6.380410628210368 3 4.9179735142280325 5.709668476830152 4 3.622040345139574 5.606821460267432 5 2.847583589259308 5.509978926514832 6 2.378829709542061 5.523547032136197 7 1.963208557251124 5.318239979838264 8 1.6072627056442867 4.975999255439892 9 1.2726782737947606 4.432661745743368 >10 4.8165852851413025 25.75974970894479 >50 0.03186155747326736 0.8499886795822698 >100 0.023296588690048702 1.6556928051994209 >500 3.425968925004655E-4 0.0929404753718988 >1k 3.425968925004655E-4 0.40702890070146835 >5k 0.0 0.0 >10k+ 3.425968925004655E-4 1.3556581464731317 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10225 1.330359919280656 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 3070 0.399433247158104 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02784322960646067 0.0 2 0.0 0.0 0.0 0.08912435645058672 0.0 3 0.0 0.0 0.0 0.17239382817084292 0.0 4 0.0 0.0 0.0 0.29794857849904177 0.0 5 0.0 0.0 0.0 0.5166610503142772 0.0 6 0.0 0.0 0.0 1.1298626444042263 0.0 7 0.0 0.0 0.0 1.4574759722036095 0.0 8 0.0 0.0 0.0 2.254781163925063 0.0 9 0.0 0.0 0.0 2.7352720374608537 0.0 10 0.0 0.0 0.0 3.3422284211717836 0.0 11 0.0 0.0 0.0 3.717721695210314 0.0 12 0.0 0.0 0.0 3.974816189146605 0.0 13 0.0 0.0 0.0 4.166986516851009 0.0 14 0.0 0.0 0.0 4.264828146122309 0.0 15 0.0 0.0 0.0 4.367353683177876 0.0 16 0.0 0.0 0.0 4.470399654431692 0.0 17 0.0 0.0 0.0 4.569542369198622 0.0 18 0.0 0.0 0.0 4.7200779610428985 0.0 19 0.0 0.0 0.0 4.806209820853538 0.0 20 0.0 0.0 0.0 4.89871699959276 0.0 21 0.0 0.0 0.0 5.002413513594392 0.0 22 0.0 0.0 0.0 5.124845658733081 0.0 23 0.0 0.0 0.0 5.248058455169148 0.0 24 0.0 0.0 0.0 5.368799189163519 0.0 25 0.0 0.0 0.0 5.500469041321174 0.0 26 0.0 0.0 0.0 5.595578391051655 0.0 27 0.0 0.0 0.0 5.704088921387113 0.0 28 0.0 0.0 0.0 5.807004784091367 0.0 29 0.0 0.0 0.0 5.917597051219833 0.0 30 0.0 0.0 0.0 6.07359720214575 0.0 31 0.0 0.0 0.0 6.202274557663459 0.0 32 0.0 0.0 0.0 6.370765129347414 0.0 33 0.0 0.0 0.0 6.500483353261626 0.0 34 0.0 0.0 0.0 6.6700147933420855 0.0 35 0.0 0.0 0.0 6.819509516789858 0.0 36 0.0 0.0 0.0 6.941551336279859 0.0 37 0.0 0.0 0.0 7.085581500645989 0.0 38 0.0 0.0 0.0 7.258235545915958 0.0 39 0.0 0.0 0.0 7.511426783365362 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATAT 60 0.0 45.000004 14 TAATACG 20 7.031826E-4 45.0 1 AACGGGC 70 0.0 45.0 4 ATATCGG 20 7.031826E-4 45.0 3 GAAACGT 20 7.031826E-4 45.0 9 TACGGGA 215 0.0 43.953487 4 CGTTTTT 6335 0.0 42.65588 1 CATTAGA 585 0.0 42.30769 17 GCATTAG 585 0.0 42.30769 16 TATGCGG 70 0.0 41.785713 2 TGATTCG 60 3.6379788E-12 41.250004 15 CTTGACC 650 0.0 41.19231 7 TGCATTA 605 0.0 40.909092 15 CTCAACT 655 0.0 40.53435 2 ACTTGAC 665 0.0 40.263157 6 TCAACTT 660 0.0 40.227272 3 TTGACCC 660 0.0 39.204544 8 ACCCTGC 665 0.0 38.90977 11 TATACTA 255 0.0 38.82353 44 GCTCAAC 705 0.0 38.617023 1 >>END_MODULE