##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547093_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 618894 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.379005128503426 31.0 31.0 33.0 30.0 34.0 2 31.74311917711272 31.0 31.0 34.0 30.0 34.0 3 31.84560199323309 31.0 31.0 34.0 30.0 34.0 4 35.61860674041112 37.0 35.0 37.0 33.0 37.0 5 35.55053046240552 37.0 35.0 37.0 33.0 37.0 6 35.588931222471054 37.0 35.0 37.0 33.0 37.0 7 35.95388224801016 37.0 35.0 37.0 35.0 37.0 8 34.60777612967649 37.0 35.0 37.0 33.0 37.0 9 36.91702617895795 39.0 37.0 39.0 33.0 39.0 10 36.82959602128959 39.0 37.0 39.0 32.0 39.0 11 36.748152349190654 39.0 35.0 39.0 32.0 39.0 12 36.4624653010047 39.0 35.0 39.0 32.0 39.0 13 36.40376381092724 39.0 35.0 39.0 32.0 39.0 14 37.49396019350648 40.0 36.0 41.0 32.0 41.0 15 37.640353598516064 40.0 36.0 41.0 32.0 41.0 16 37.666304730697014 40.0 36.0 41.0 33.0 41.0 17 37.559173299466465 40.0 35.0 41.0 32.0 41.0 18 37.47704938163886 39.0 36.0 41.0 32.0 41.0 19 37.42041124974551 39.0 36.0 41.0 32.0 41.0 20 37.28883944585018 39.0 35.0 41.0 32.0 41.0 21 37.183540315465976 39.0 35.0 41.0 32.0 41.0 22 37.087898735486206 39.0 35.0 41.0 32.0 41.0 23 37.002943961324554 39.0 35.0 41.0 31.0 41.0 24 36.85752487501899 39.0 35.0 41.0 31.0 41.0 25 36.73561870045597 38.0 35.0 41.0 31.0 41.0 26 36.602117648579565 38.0 35.0 41.0 31.0 41.0 27 36.49908384957683 38.0 35.0 41.0 30.0 41.0 28 36.516880111941624 38.0 35.0 41.0 31.0 41.0 29 36.469616767976426 38.0 35.0 41.0 30.0 41.0 30 36.3918134607865 38.0 35.0 40.0 30.0 41.0 31 36.315839222871766 38.0 35.0 40.0 30.0 41.0 32 36.23022359240839 38.0 35.0 41.0 30.0 41.0 33 36.086030887357126 38.0 35.0 41.0 30.0 41.0 34 35.92472701302646 38.0 35.0 41.0 29.0 41.0 35 35.78583570045921 38.0 35.0 41.0 29.0 41.0 36 35.6542687439206 38.0 35.0 41.0 28.0 41.0 37 35.610419554883386 38.0 35.0 40.0 28.0 41.0 38 35.48476475777758 38.0 35.0 40.0 27.0 41.0 39 35.376642849987235 38.0 34.0 40.0 27.0 41.0 40 35.22290569952205 38.0 34.0 40.0 26.0 41.0 41 35.10609732846012 38.0 34.0 40.0 26.0 41.0 42 35.00883026818809 37.0 34.0 40.0 26.0 41.0 43 34.919404615329924 37.0 34.0 40.0 26.0 41.0 44 34.77463669061261 37.0 34.0 40.0 25.0 41.0 45 34.64998529635123 37.0 34.0 40.0 24.0 41.0 46 34.575163113554176 37.0 34.0 40.0 24.0 41.0 47 34.491615688631654 36.0 34.0 40.0 24.0 41.0 48 34.37366010980879 36.0 33.0 40.0 24.0 41.0 49 34.29433957996038 36.0 33.0 40.0 24.0 41.0 50 34.18469560215481 36.0 33.0 40.0 24.0 41.0 51 33.803415447556446 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 0.0 12 1.0 13 3.0 14 7.0 15 31.0 16 61.0 17 164.0 18 295.0 19 563.0 20 1003.0 21 1594.0 22 2415.0 23 3313.0 24 4848.0 25 6783.0 26 8795.0 27 10766.0 28 11633.0 29 12987.0 30 15261.0 31 18319.0 32 22379.0 33 29038.0 34 45668.0 35 63166.0 36 52311.0 37 68399.0 38 94121.0 39 144876.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.427553022003764 21.609031595071208 27.26234217814359 15.701073204781432 2 33.895788293310325 24.253103116204066 28.719134455981155 13.131974134504453 3 30.15265942148413 25.362986230275297 30.92807492074572 13.556279427494855 4 26.11691178133897 28.195135192779375 30.48211810099952 15.205834924882128 5 23.523737505938012 31.79510546232473 29.81479865695903 14.866358374778233 6 21.688366666989825 40.51824706654128 26.959059225004605 10.83432704146429 7 85.90033188235789 4.091007506939799 7.922843007041594 2.0858176036607237 8 82.76231470978875 6.541184758617792 7.450387303803237 3.246113227790219 9 79.78862293058262 5.547315049103724 10.716697851328338 3.9473641689853194 10 43.69520467155927 25.409520854944468 16.520438071786124 14.374836401710148 11 33.65261256370234 25.66836970466671 24.074881966863472 16.604135764767474 12 29.252990011213555 22.10491618920203 28.66839878880713 19.97369501077729 13 24.08683878014652 25.613432994987832 31.06315459513261 19.23657362973304 14 21.727791835112313 27.65610912369485 31.091753999877202 19.524345041315637 15 20.391052425778888 23.252447107259076 36.671384760556734 19.6851157064053 16 23.226756116556306 21.466034571348246 34.84263864248159 20.46457066961386 17 23.600164163814803 22.605001825837704 28.85922306566229 24.935610944685198 18 24.38075017692852 22.598377104964662 30.963137467805474 22.057735250301345 19 27.35815826296587 25.063581162525406 26.48628036465049 21.091980209858228 20 28.483714497151368 24.23209790367979 25.552033142993793 21.73215445617505 21 26.562383865411526 25.372034629516527 27.64576809599059 20.41981340908136 22 26.196408431815467 23.095554327558514 27.181068163530426 23.526969077095593 23 24.561718161753063 25.792946772791463 26.12337492365413 23.521960141801344 24 23.795835797406344 23.786625819607234 30.92209651410419 21.49544186888223 25 24.12771815528992 24.1278797338478 28.575975853700307 23.16842625716197 26 22.066622070984693 26.87891626029659 27.19997285480228 23.85448881391644 27 22.563960872136423 25.230653391372353 27.827705552162406 24.377680184328817 28 22.466367423177473 25.522464266901924 29.986071928310825 22.025096381609774 29 23.371368925858064 23.675621350344326 29.459648986740866 23.49336073705675 30 23.83833095812853 24.4287390086186 28.904949797542066 22.8279802357108 31 26.04307038038824 24.455561049226525 25.73574796330228 23.76562060708296 32 26.66934887072746 24.023661564015807 25.83027141966153 23.476718145595207 33 25.64526397089001 24.065187253390725 26.218706272802773 24.07084250291649 34 23.207043532495064 25.14162360598099 28.143591632815955 23.507741228707985 35 23.77563847767146 25.18007930275621 28.434109879882502 22.610172339689832 36 26.177342161985734 24.97762136973375 26.838036885153194 22.00699958312732 37 24.66383581033263 27.14148141685006 26.60908006863857 21.585602704178743 38 24.398685396853097 26.77647545460127 26.53701603182451 22.28782311672112 39 23.76562060708296 26.60019324795522 26.30466606559443 23.329520079367388 40 25.011391288330476 24.336639230627537 27.93483213603622 22.71713734500577 41 22.651213293391116 24.236460524742526 28.04890659789883 25.063419583967526 42 24.371701777687292 25.84788348247034 25.98296315685723 23.797451582985133 43 23.443594541230002 24.09863401487169 28.474019783678628 23.98375166021968 44 23.478333931173996 25.404835076765973 27.573865637734414 23.54296535432562 45 22.49787524196389 26.10883285344502 27.113366747779104 24.27992515681199 46 24.045959405003117 25.504690625535233 27.300959453476686 23.148390515984968 47 23.849964614295825 25.042575950001133 27.809285596564195 23.29817383913885 48 23.4814039237737 24.342617637269065 28.642061483872844 23.53391695508439 49 23.553791117703515 23.770629542377208 28.412619931684585 24.26295940823469 50 22.607748661321647 25.07489166157694 29.00529008198496 23.31206959511645 51 22.02768163853584 26.55430493751757 27.589861914964438 23.828151508982153 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 581.0 1 803.0 2 1025.0 3 3939.5 4 6854.0 5 4823.0 6 2792.0 7 2798.5 8 2805.0 9 2890.0 10 2975.0 11 3104.0 12 3233.0 13 3199.0 14 3165.0 15 3167.0 16 3169.0 17 2981.5 18 2794.0 19 2759.5 20 2725.0 21 2900.0 22 3075.0 23 3168.0 24 3261.0 25 3399.0 26 3905.5 27 4274.0 28 5058.5 29 5843.0 30 6965.5 31 8088.0 32 9165.5 33 10243.0 34 12135.0 35 14027.0 36 15082.0 37 16137.0 38 17721.5 39 19306.0 40 22622.0 41 25938.0 42 29312.5 43 32687.0 44 34913.0 45 37139.0 46 40699.0 47 44259.0 48 46092.5 49 47926.0 50 46074.0 51 44222.0 52 41603.5 53 38985.0 54 36622.5 55 34260.0 56 33456.0 57 32652.0 58 31675.0 59 30698.0 60 30300.0 61 29902.0 62 27706.5 63 25511.0 64 23873.5 65 22236.0 66 19371.0 67 16506.0 68 14325.0 69 12144.0 70 10540.5 71 8937.0 72 7538.5 73 6140.0 74 4922.0 75 3053.0 76 2402.0 77 1932.5 78 1463.0 79 1062.5 80 662.0 81 493.0 82 324.0 83 235.5 84 147.0 85 118.5 86 90.0 87 62.5 88 35.0 89 20.5 90 6.0 91 6.0 92 6.0 93 4.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 618894.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.58442393652965 #Duplication Level Percentage of deduplicated Percentage of total 1 71.63559260394837 24.058401109555298 2 6.790435079455799 4.561057008438519 3 3.574314168265342 3.6012384692810278 4 2.507701704122493 3.3687886855043057 5 1.9248802200046926 3.2322996667839026 6 1.5738688742186213 3.1714487695360103 7 1.3635217008713043 3.20551635941039 8 1.1700664726686218 3.143680676161831 9 1.072722318787489 3.2424085008302526 >10 8.338968069646297 45.93080705673637 >50 0.03014078421340916 0.6714110654800207 >100 0.01679978136439883 1.0505940324922505 >500 4.941112165999656E-4 0.10222175391174007 >1k 4.941112165999656E-4 0.6601268458780876 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3978 0.6427595032428817 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.615785578790552E-4 0.0 0.0 0.04621146755340979 0.0 2 1.615785578790552E-4 0.0 0.0 0.13895755977598748 0.0 3 1.615785578790552E-4 0.0 0.0 0.23752048008221116 0.0 4 1.615785578790552E-4 0.0 0.0 0.4792420026692778 0.0 5 1.615785578790552E-4 0.0 0.0 0.8040149040061788 0.0 6 1.615785578790552E-4 0.0 0.0 1.7017453715822095 0.0 7 1.615785578790552E-4 0.0 0.0 2.1024601951222666 0.0 8 1.615785578790552E-4 0.0 0.0 3.1328466587170016 0.0 9 1.615785578790552E-4 0.0 0.0 3.640849644688751 0.0 10 1.615785578790552E-4 0.0 0.0 4.265997085122816 0.0 11 1.615785578790552E-4 0.0 0.0 4.700643405817474 0.0 12 1.615785578790552E-4 0.0 0.0 5.0599941185404935 0.0 13 1.615785578790552E-4 0.0 0.0 5.274570443403879 0.0 14 1.615785578790552E-4 0.0 0.0 5.384928598435273 0.0 15 1.615785578790552E-4 0.0 0.0 5.468141555742987 0.0 16 1.615785578790552E-4 0.0 0.0 5.599181766182901 0.0 17 1.615785578790552E-4 0.0 0.0 5.72230462728674 0.0 18 1.615785578790552E-4 0.0 0.0 5.9228236176146485 0.0 19 1.615785578790552E-4 0.0 0.0 6.028980730141187 0.0 20 1.615785578790552E-4 0.0 0.0 6.138369413825307 0.0 21 1.615785578790552E-4 0.0 0.0 6.276034345138263 0.0 22 1.615785578790552E-4 0.0 0.0 6.43728974590156 0.0 23 1.615785578790552E-4 0.0 0.0 6.59983777512789 0.0 24 1.615785578790552E-4 0.0 0.0 6.748974784050257 0.0 25 1.615785578790552E-4 0.0 0.0 6.864503452933782 0.0 26 1.615785578790552E-4 0.0 0.0 6.986979999806105 0.0 27 1.615785578790552E-4 0.0 0.0 7.118020210246019 0.0 28 1.615785578790552E-4 0.0 0.0 7.253907777422305 0.0 29 1.615785578790552E-4 0.0 0.0 7.379131159778573 0.0 30 3.231571157581104E-4 0.0 0.0 7.561553351624026 0.0 31 3.231571157581104E-4 0.0 0.0 7.696309868895158 0.0 32 3.231571157581104E-4 0.0 0.0 7.840437942523275 0.0 33 3.231571157581104E-4 0.0 0.0 7.976810245373198 0.0 34 3.231571157581104E-4 0.0 0.0 8.117060433612219 0.0 35 3.231571157581104E-4 0.0 0.0 8.266682178208223 0.0 36 3.231571157581104E-4 0.0 0.0 8.410325516162704 0.0 37 4.8473567363716566E-4 0.0 0.0 8.561724624895378 0.0 38 4.8473567363716566E-4 0.0 0.0 8.71716319757503 0.0 39 4.8473567363716566E-4 0.0 0.0 8.942565285816311 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACGG 20 7.03076E-4 45.0 2 TATACGG 60 3.6379788E-12 41.249996 2 GCGATTC 95 0.0 40.263157 9 TACGGGC 85 0.0 39.705883 4 CGGGTAT 35 6.2436156E-6 38.57143 6 CGCATCG 35 6.2436156E-6 38.57143 21 TTCGTAC 35 6.2436156E-6 38.57143 33 CATCGTT 35 6.2436156E-6 38.57143 36 ATACCGG 35 6.2436156E-6 38.57143 2 CGTTTTT 2245 0.0 38.485523 1 GTTGATC 370 0.0 37.7027 16 ATCTACG 30 1.13931324E-4 37.499996 1 TCGATAG 30 1.13931324E-4 37.499996 1 GTATGCG 30 1.13931324E-4 37.499996 1 GTAGGGA 680 0.0 37.058823 4 TAGGGCG 250 0.0 36.899998 5 CGAATAT 55 2.744855E-9 36.818184 14 CCGAACG 55 2.744855E-9 36.818184 36 CGTCATA 110 0.0 36.818184 38 GTAAGGG 750 0.0 36.6 3 >>END_MODULE