##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547092_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 802382 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.389724595018333 31.0 31.0 33.0 30.0 34.0 2 31.752361094840115 31.0 31.0 34.0 30.0 34.0 3 31.871977437180796 31.0 31.0 34.0 30.0 34.0 4 35.626731407234956 37.0 35.0 37.0 33.0 37.0 5 35.56151309476035 37.0 35.0 37.0 33.0 37.0 6 35.6050808717045 37.0 35.0 37.0 33.0 37.0 7 35.959344800855455 37.0 35.0 37.0 35.0 37.0 8 34.63479240561229 37.0 35.0 37.0 33.0 37.0 9 36.94510594704268 39.0 37.0 39.0 33.0 39.0 10 36.8321535129153 39.0 37.0 39.0 32.0 39.0 11 36.75739859568136 39.0 35.0 39.0 32.0 39.0 12 36.3182224925285 38.0 35.0 39.0 32.0 39.0 13 36.142192870727406 38.0 35.0 39.0 32.0 39.0 14 37.17037520781872 39.0 35.0 41.0 32.0 41.0 15 37.38011196661939 39.0 35.0 41.0 32.0 41.0 16 37.4586094902428 39.0 35.0 41.0 32.0 41.0 17 37.36726272523561 39.0 35.0 41.0 32.0 41.0 18 37.323835778968125 39.0 35.0 41.0 32.0 41.0 19 37.259742865617625 39.0 35.0 41.0 32.0 41.0 20 37.12704173323928 39.0 35.0 41.0 32.0 41.0 21 37.00041875316246 39.0 35.0 41.0 32.0 41.0 22 36.90927264071228 39.0 35.0 41.0 31.0 41.0 23 36.86023614687269 38.0 35.0 41.0 31.0 41.0 24 36.69896508146992 38.0 35.0 41.0 31.0 41.0 25 36.60128218230219 38.0 35.0 41.0 31.0 41.0 26 36.49321769431518 38.0 35.0 40.0 31.0 41.0 27 36.39304720195618 38.0 35.0 40.0 31.0 41.0 28 36.415973937600796 38.0 35.0 40.0 31.0 41.0 29 36.37695885500921 38.0 35.0 40.0 31.0 41.0 30 36.314947244579265 38.0 35.0 40.0 30.0 41.0 31 36.22606314697987 38.0 35.0 40.0 30.0 41.0 32 36.114047922311315 38.0 35.0 40.0 30.0 41.0 33 35.98821135070328 38.0 35.0 41.0 30.0 41.0 34 35.85013871198507 38.0 35.0 41.0 29.0 41.0 35 35.73864942134794 38.0 35.0 41.0 29.0 41.0 36 35.6167984825183 38.0 35.0 40.0 29.0 41.0 37 35.55018681874718 38.0 35.0 40.0 28.0 41.0 38 35.45067561336122 38.0 34.0 40.0 28.0 41.0 39 35.365922964373574 38.0 34.0 40.0 27.0 41.0 40 35.19118699073508 37.0 34.0 40.0 27.0 41.0 41 35.094641953583206 37.0 34.0 40.0 26.0 41.0 42 35.02851385001159 37.0 34.0 40.0 26.0 41.0 43 34.928630004162606 37.0 34.0 40.0 26.0 41.0 44 34.83043114127685 37.0 34.0 40.0 26.0 41.0 45 34.71901039654429 37.0 34.0 40.0 25.0 41.0 46 34.64333197903243 36.0 34.0 40.0 25.0 41.0 47 34.56001256259487 36.0 34.0 40.0 25.0 41.0 48 34.48902642382307 36.0 34.0 40.0 24.0 41.0 49 34.425611491783215 36.0 34.0 40.0 24.0 41.0 50 34.31742486745715 36.0 34.0 40.0 24.0 41.0 51 33.93968458913585 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 1.0 14 18.0 15 32.0 16 74.0 17 187.0 18 391.0 19 767.0 20 1272.0 21 1945.0 22 3034.0 23 4457.0 24 6215.0 25 8602.0 26 11352.0 27 13546.0 28 15193.0 29 16917.0 30 19782.0 31 23929.0 32 29534.0 33 37836.0 34 63414.0 35 98068.0 36 62287.0 37 80434.0 38 114699.0 39 188252.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.49444030399486 24.85075687141536 25.617224713415805 14.037578111173978 2 32.39678856205648 26.48863010386574 26.497852643753223 14.61672869032456 3 29.750916645687465 25.62632262438589 30.291930776114118 14.330829953812524 4 25.67941454319763 29.01336271252346 29.910441659957478 15.396781084321434 5 22.57204174570217 32.08845662041272 29.818964034587015 15.52053759929809 6 20.826489128619535 40.720753955098694 27.391940497169674 11.060816419112093 7 86.44697911967117 4.11686702842287 7.411806346602989 2.0243475053029605 8 83.8545730088661 6.152555765209089 6.8835043657509765 3.1093668601738322 9 81.24571588096443 5.013447460187292 9.893541978758247 3.847294680090032 10 44.51757392364236 24.73697066983058 16.336732379340514 14.408723027186552 11 37.14353013901109 24.7191487346426 22.267947187249966 15.86937393909634 12 33.180330565740505 22.092718929387747 26.133936204949766 18.593014299921983 13 23.654319264390278 31.502326821887827 27.64979772726706 17.19355618645483 14 19.770508311502503 33.31405739410904 29.39360553950612 17.52182875488234 15 18.573322930973028 23.963523608455823 39.343355160011065 18.119798300560085 16 20.517035526719194 20.931551305986424 38.892073850111295 19.659339317183086 17 21.07312975615106 21.799716344584 28.58164814265524 28.545505756609696 18 23.481209698123838 23.12427247869469 31.58969169298414 21.804826130197338 19 27.36202955699405 25.826102778975603 25.732755719844164 21.079111944186185 20 29.033677226059407 25.189747526739136 24.852750934093738 20.923824313107723 21 25.076335211906546 27.31217799003467 27.48740624789689 20.124080550161892 22 24.40981976165966 23.823814592052166 27.017305971469945 24.74905967481823 23 22.634979348988388 28.275933408276856 25.479385130773125 23.609702111961635 24 22.427222943685177 24.368069074331178 33.27230670678056 19.932401275203084 25 22.17173366301836 25.01190206161155 30.49482665363879 22.321537621731295 26 20.276127829387995 29.281564142764914 27.13034439955034 23.31196362829675 27 21.082975440625535 27.42297309760189 28.048236376189895 23.445815085582677 28 19.430894511591738 27.166985301265484 32.278017203775754 21.124102983367024 29 20.497468786687637 24.433000740295768 31.197858376683424 23.871672096333167 30 21.9121316280774 25.928547749077126 29.325558150606568 22.83376247223891 31 25.97802542928431 25.9147139392459 25.11310074253909 22.99415988893071 32 26.9411577029395 24.61832394046726 26.1386721038109 22.30184625278234 33 24.976382820152995 25.30702333801107 25.762417402184994 23.95417643965094 34 20.79558115710472 26.609270895907432 27.474943356157045 25.120204590830802 35 20.87808550042249 26.65301564591429 29.036792948994368 23.43210590466885 36 26.545710148034228 27.07625544939941 24.348128447547428 22.02990595501893 37 21.656766976327983 29.46526716701023 27.041733239280042 21.836232617381746 38 22.495768848254322 29.830928410657272 24.94485170405119 22.728451037037225 39 22.037009803310642 28.709642040823447 25.383296235458918 23.870051920406986 40 24.14261536275739 25.95858331817015 26.473799262695323 23.425002056377135 41 19.923427993150394 25.14114224895374 27.52404714961203 27.411382608283834 42 23.648087818520356 26.486511412269962 24.997071220441136 24.868329548768543 43 22.049098808298293 25.48212696695589 27.59309156985077 24.87568265489505 44 22.00996532823518 26.87597677914011 27.58175033836751 23.532307554257198 45 20.59106510365387 28.125506304976934 25.87645286160457 25.406975729764625 46 22.732065275641776 27.0050923375649 27.00272438813433 23.260117998658995 47 22.07402459177798 26.052802779723372 28.040010867641595 23.83316176085705 48 22.98992250573916 24.852875563011136 28.582146658324838 23.575055272924867 49 22.482807440844883 23.82481162339135 29.54527893198003 24.147102003783736 50 21.231782367999283 27.44540630273361 27.997761664643523 23.325049664623585 51 20.324483849338595 28.7697131790095 26.519538075380556 24.38626489627135 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 869.0 1 1199.0 2 1529.0 3 4537.0 4 7545.0 5 5315.0 6 3085.0 7 3114.0 8 3143.0 9 3452.0 10 3761.0 11 3920.5 12 4080.0 13 3984.5 14 3889.0 15 3873.0 16 3857.0 17 3942.5 18 4028.0 19 3815.5 20 3603.0 21 3589.5 22 3576.0 23 3626.5 24 3677.0 25 3984.5 26 4956.5 27 5621.0 28 6410.0 29 7199.0 30 8035.5 31 8872.0 32 11161.5 33 13451.0 34 15040.0 35 16629.0 36 18597.5 37 20566.0 38 23245.5 39 25925.0 40 33242.0 41 40559.0 42 47846.0 43 55133.0 44 56724.5 45 58316.0 46 62054.0 47 65792.0 48 66757.5 49 67723.0 50 65637.5 51 63552.0 52 59225.0 53 54898.0 54 50728.5 55 46559.0 56 43135.5 57 39712.0 58 37847.5 59 35983.0 60 33688.5 61 31394.0 62 28702.5 63 26011.0 64 23602.5 65 21194.0 66 17808.5 67 14423.0 68 12618.0 69 10813.0 70 9226.5 71 7640.0 72 6560.5 73 5481.0 74 4578.0 75 2942.5 76 2210.0 77 1657.5 78 1105.0 79 809.5 80 514.0 81 404.5 82 295.0 83 202.0 84 109.0 85 81.5 86 54.0 87 40.0 88 26.0 89 17.0 90 8.0 91 6.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 802382.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.055150093224864 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5475027856511 21.756068300062147 2 5.8910603403819035 3.3054916411531727 3 2.42168169086486 2.0382192994568467 4 1.484010784067138 1.6653658114787147 5 1.1062738596979325 1.551833958901834 6 0.888819577603919 1.4961579993284804 7 0.7319447677089648 1.437437422261793 8 0.6388879610906087 1.4339278112921148 9 0.5440934340475079 1.3738160661246879 >10 8.248828599822414 53.38926425918461 >50 0.4612075217852304 7.862645944077575 >100 0.03202830012167732 1.5408999201146698 >500 0.003202830012167732 0.5826511777241324 >1k 4.5754714459539023E-4 0.5662203888392043 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4411 0.5497381546445458 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 834 0.10394051711030408 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08362600357435736 0.0 2 0.0 0.0 0.0 0.2801658063117069 0.0 3 0.0 0.0 0.0 0.41875316245877897 0.0 4 0.0 0.0 0.0 0.7642245214872716 0.0 5 0.0 0.0 0.0 1.2590013235591029 0.0 6 0.0 0.0 0.0 2.160566912019462 0.0 7 0.0 0.0 0.0 2.5404358522499257 0.0 8 0.0 0.0 0.0 3.5060607042530862 0.0 9 0.0 0.0 0.0 3.9025052904975435 0.0 10 0.0 0.0 0.0 4.459970438020793 0.0 11 0.0 0.0 0.0 4.9715721439414144 0.0 12 0.0 0.0 0.0 5.388954388308811 0.0 13 0.0 0.0 0.0 5.582129210276402 0.0 14 0.0 0.0 0.0 5.66650298735515 0.0 15 0.0 0.0 0.0 5.754989518708046 0.0 16 0.0 0.0 0.0 5.930217776570262 0.0 17 0.0 0.0 0.0 6.104947518762883 0.0 18 0.0 0.0 0.0 6.359190510255714 0.0 19 0.0 0.0 0.0 6.471979680501307 0.0 20 0.0 0.0 0.0 6.598727289495527 0.0 21 0.0 0.0 0.0 6.77333240277075 0.0 22 0.0 0.0 0.0 6.960151149951021 0.0 23 0.0 0.0 0.0 7.156067808101378 0.0 24 0.0 0.0 0.0 7.325438506845867 0.0 25 0.0 0.0 0.0 7.469011019688876 0.0 26 0.0 0.0 0.0 7.601740816718221 0.0 27 0.0 0.0 0.0 7.747182763322209 0.0 28 0.0 0.0 0.0 7.887016408643265 0.0 29 0.0 0.0 0.0 8.038689801117174 0.0 30 0.0 0.0 0.0 8.215787492740365 0.0 31 0.0 0.0 0.0 8.375312507010376 0.0 32 0.0 0.0 0.0 8.515769296918425 0.0 33 0.0 0.0 0.0 8.675543569023233 0.0 34 0.0 0.0 0.0 8.83369766520186 0.0 35 0.0 0.0 0.0 9.011169243577248 0.0 36 0.0 0.0 0.0 9.168450937334088 0.0 37 0.0 0.0 0.0 9.324486341916943 0.0 38 0.0 0.0 0.0 9.49310926715704 0.0 39 0.0 0.0 0.0 9.727037745113924 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAC 20 7.0320116E-4 45.0 19 CGATATA 25 3.8897495E-5 45.0 10 TATCGAC 20 7.0320116E-4 45.0 15 TAGTACG 20 7.0320116E-4 45.0 1 TAGACGG 65 0.0 44.999996 2 TTAACGG 30 2.1646792E-6 44.999996 2 CGGTCTA 65 0.0 41.53846 31 TCACGAC 60 3.6379788E-12 41.249996 25 TAGCATA 480 0.0 40.781246 30 ATGGGTA 210 0.0 40.714287 5 AACACGT 390 0.0 40.384617 41 CGTTTTT 2660 0.0 40.093987 1 CGTTCGG 45 1.9270374E-8 40.0 45 ACACGAC 410 0.0 39.512196 26 AATGCGG 115 0.0 39.130432 2 TAGGGAC 645 0.0 39.06977 5 TTGATCC 525 0.0 39.0 17 ACACGTG 410 0.0 38.963413 42 CGAGACA 405 0.0 38.88889 22 AGGGTAC 355 0.0 38.66197 6 >>END_MODULE