##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547091_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1564148 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46988775998179 31.0 31.0 33.0 30.0 34.0 2 31.82967021023586 31.0 31.0 34.0 30.0 34.0 3 31.889976523960648 31.0 31.0 34.0 30.0 34.0 4 35.67878295404271 37.0 35.0 37.0 33.0 37.0 5 35.62559872850907 37.0 35.0 37.0 33.0 37.0 6 35.670474277370175 37.0 35.0 37.0 33.0 37.0 7 36.02829847303452 37.0 35.0 37.0 35.0 37.0 8 34.710707043067536 37.0 35.0 37.0 33.0 37.0 9 37.01558484235507 39.0 37.0 39.0 34.0 39.0 10 36.91854543176221 39.0 37.0 39.0 32.0 39.0 11 36.84209230840048 39.0 37.0 39.0 32.0 39.0 12 36.61999951411248 39.0 35.0 39.0 32.0 39.0 13 36.58417809567892 39.0 35.0 39.0 32.0 39.0 14 37.69690847669146 40.0 36.0 41.0 33.0 41.0 15 37.81535570802763 40.0 36.0 41.0 33.0 41.0 16 37.84315039241811 40.0 36.0 41.0 33.0 41.0 17 37.72367640402315 40.0 36.0 41.0 33.0 41.0 18 37.61006950748906 39.0 36.0 41.0 33.0 41.0 19 37.512814004812846 39.0 36.0 41.0 32.0 41.0 20 37.35810485964244 39.0 35.0 41.0 32.0 41.0 21 37.26226162741633 39.0 35.0 41.0 32.0 41.0 22 37.169716676427036 39.0 35.0 41.0 32.0 41.0 23 37.079336482225465 39.0 35.0 41.0 32.0 41.0 24 36.92723642519761 39.0 35.0 41.0 31.0 41.0 25 36.821302076274115 38.0 35.0 41.0 31.0 41.0 26 36.72446085664528 38.0 35.0 41.0 31.0 41.0 27 36.615624608413015 38.0 35.0 41.0 31.0 41.0 28 36.62536793193483 38.0 35.0 41.0 31.0 41.0 29 36.55750414922373 38.0 35.0 41.0 31.0 41.0 30 36.469343054493564 38.0 35.0 41.0 31.0 41.0 31 36.341706795009166 38.0 35.0 41.0 30.0 41.0 32 36.19508511982242 38.0 35.0 41.0 30.0 41.0 33 35.97431061510803 38.0 35.0 41.0 29.0 41.0 34 35.72902308477203 38.0 35.0 41.0 27.0 41.0 35 35.5449688904119 38.0 35.0 41.0 27.0 41.0 36 35.40739750969857 38.0 35.0 41.0 26.0 41.0 37 35.356890780156355 38.0 35.0 41.0 26.0 41.0 38 35.227558389615304 38.0 34.0 40.0 25.0 41.0 39 35.1294155028808 38.0 34.0 40.0 25.0 41.0 40 34.991530213253476 38.0 34.0 40.0 24.0 41.0 41 34.897045548119486 38.0 34.0 40.0 24.0 41.0 42 34.83151722215545 38.0 34.0 40.0 23.0 41.0 43 34.73712909520071 38.0 34.0 40.0 23.0 41.0 44 34.62145973398937 37.0 34.0 40.0 23.0 41.0 45 34.49638013794091 37.0 34.0 40.0 23.0 41.0 46 34.41869823060222 37.0 34.0 40.0 23.0 41.0 47 34.334727915772675 37.0 34.0 40.0 23.0 41.0 48 34.25424512258431 37.0 33.0 40.0 23.0 41.0 49 34.176753094975666 36.0 33.0 40.0 23.0 41.0 50 34.07228408053458 36.0 33.0 40.0 23.0 41.0 51 33.718999736597816 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 6.0 12 7.0 13 12.0 14 24.0 15 46.0 16 146.0 17 342.0 18 748.0 19 1466.0 20 2530.0 21 3924.0 22 6026.0 23 8735.0 24 13006.0 25 19277.0 26 26749.0 27 30974.0 28 32402.0 29 33539.0 30 37481.0 31 44030.0 32 53700.0 33 68813.0 34 108317.0 35 152401.0 36 127220.0 37 163257.0 38 235998.0 39 392724.0 40 247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.920288872919954 23.516572600546752 24.476392259556 17.086746266977293 2 34.76454913473661 25.286737572147906 26.727969476034236 13.22074381708125 3 29.024938816531424 25.48607932241706 32.34431780112879 13.144664059922718 4 25.516063697297188 28.19534980065825 31.38801443341679 14.900572068627776 5 23.179520096563753 31.369857583809207 31.055053613852397 14.395568705774645 6 21.7793329020016 39.603221690019105 28.388554024299488 10.228891383679805 7 85.1813894848825 3.4746711947974234 9.681436794983595 1.6625025253364771 8 82.69613872856021 5.815945805639876 9.233141620869636 2.254773844930275 9 79.95592488690329 5.145484954109202 11.55498073072369 3.3436094282638216 10 39.68556683894363 28.915230528057446 18.13715837631733 13.262044256681593 11 31.340832197464692 26.158905679002242 26.15040264731982 16.34985947621325 12 27.811051128154112 23.319852085608268 30.211271567652165 18.65782521858545 13 23.56720719522705 26.869899779304774 31.401248475208227 18.16164455025995 14 21.038929819940314 27.943583343775654 32.60318077317492 18.414306063109116 15 20.479391975695393 24.041522924940605 37.40982311136798 18.069261987996022 16 23.781892762065993 22.7839053593394 34.765060595288936 18.66914128330567 17 23.14601943038638 22.672470891501316 30.941381506097887 23.240128172014412 18 24.350764761390867 22.76683536340551 32.306213989980485 20.576185885223136 19 26.980055595762035 24.952753831478862 28.77176584312993 19.295424729629165 20 28.857051890230334 24.66448187767398 27.789377987249285 18.689088244846396 21 26.275135089518383 25.284308134524352 29.581024302048142 18.85953247390912 22 25.130102777997994 23.09167674670172 29.330025035994034 22.448195439306254 23 23.331040285190404 26.577664006219358 29.014837470622982 21.076458237967252 24 22.817789620931013 24.76754117896772 32.85264565757204 19.562023542529225 25 23.444904190652036 25.271905216130442 30.39104995179484 20.892140641422678 26 21.57052913151441 27.48947030587898 29.189373384104318 21.75062717850229 27 21.31460705764416 25.874277881632686 30.617690909044416 22.19342415167874 28 21.153688781368515 26.865360566902872 31.796287819311214 20.184662832417395 29 22.168490449752838 25.245948593099886 31.41863813398732 21.166922823159958 30 22.84138073890706 25.966724376465656 31.177292685858372 20.014602198768912 31 24.99092157519621 26.27762845971097 28.386380316952103 20.34506964814071 32 25.791549137293913 26.024966946861806 28.362085940716607 19.82139797512767 33 24.90851249370264 26.326792605303336 27.816996857074905 20.947698043919118 34 22.717351554967944 27.461531773208165 29.55481194874142 20.26630472308247 35 23.153371675826072 27.721289801220856 29.14487631605193 19.980462206901137 36 25.955472244314475 27.91225638494567 26.272577786756752 19.859693583983102 37 24.073361344322915 28.53994634778806 27.13988701836399 20.24680528952503 38 24.524917079457953 28.589685886501787 26.649076685837912 20.236320348202344 39 24.120032119722687 27.29530709370213 26.6415326426911 21.94312814388408 40 25.361091149942332 25.350734073757724 28.02759073949524 21.2605840368047 41 22.0529003649271 26.03628301158202 28.042870623495986 23.867945999994884 42 23.674613911215562 27.011062891746818 27.019118395445958 22.295204801591666 43 22.895723422591725 25.962888422323203 28.37046110726095 22.77092704782412 44 22.54933676352877 27.0815805153988 28.449609627733434 21.919473093338993 45 22.155384273099475 27.63907251743441 27.296138217099656 22.90940499236645 46 23.115076066970644 27.395425496819993 27.675322284080533 21.814176152128827 47 22.6448520216757 27.17409094280081 28.746704276065948 21.434352759457546 48 23.25962760557185 26.08423243836261 29.091876216317125 21.564263739748412 49 23.120126739924867 25.84998350539719 29.124609691666002 21.90528006301194 50 21.886164224868747 27.539401642299833 28.93051041205819 21.643923720773227 51 21.631392937241234 27.51919895048295 28.43682311392528 22.41258499835054 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1554.0 1 2300.0 2 3046.0 3 14672.0 4 26298.0 5 18230.0 6 10162.0 7 10248.5 8 10335.0 9 10735.5 10 11136.0 11 11323.5 12 11511.0 13 11353.5 14 11196.0 15 10757.0 16 10318.0 17 10052.0 18 9786.0 19 9473.0 20 9160.0 21 8946.5 22 8733.0 23 9059.5 24 9386.0 25 10412.5 26 12994.0 27 14549.0 28 15571.0 29 16593.0 30 19882.0 31 23171.0 32 26780.0 33 30389.0 34 35577.5 35 40766.0 36 45287.0 37 49808.0 38 54122.5 39 58437.0 40 66546.5 41 74656.0 42 82421.0 43 90186.0 44 94587.5 45 98989.0 46 103188.0 47 107387.0 48 112129.5 49 116872.0 50 113879.5 51 110887.0 52 104153.0 53 97419.0 54 92208.0 55 86997.0 56 83701.0 57 80405.0 58 74923.5 59 69442.0 60 65754.0 61 62066.0 62 56377.0 63 50688.0 64 45934.0 65 41180.0 66 36551.5 67 31923.0 68 26819.0 69 21715.0 70 18825.0 71 15935.0 72 13657.5 73 11380.0 74 9888.0 75 6859.0 76 5322.0 77 3878.0 78 2434.0 79 1776.0 80 1118.0 81 846.5 82 575.0 83 386.5 84 198.0 85 163.5 86 129.0 87 86.0 88 43.0 89 26.0 90 9.0 91 14.0 92 19.0 93 12.0 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1564148.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.07671017908792 #Duplication Level Percentage of deduplicated Percentage of total 1 76.00337480083414 21.33924726915614 2 6.0305303626930264 3.386349064390441 3 2.5528822949003835 2.150296089457288 4 1.6241885228949995 1.824074817340952 5 1.2149246972225685 1.70555443066671 6 0.9939034220100746 1.6743322995468348 7 0.8336220156021356 1.6383754611677788 8 0.7601653627768258 1.7074354063092934 9 0.6808886510833269 1.7205401988627018 >10 8.99344980381072 55.03578667253463 >50 0.28085377673816114 4.820085879539757 >100 0.02746094691342728 1.3668676542562013 >500 0.0035206336126735937 0.6177329113964719 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.3470890751157292E-4 1.0133218453748185 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15377 0.9830911141400941 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.278651380815626E-4 0.0 0.0 0.04750189879730051 0.0 2 1.278651380815626E-4 0.0 0.0 0.13828614683520996 0.0 3 1.278651380815626E-4 0.0 0.0 0.24243230180264272 0.0 4 1.278651380815626E-4 0.0 0.0 0.38979687344164365 0.0 5 1.278651380815626E-4 0.0 0.0 0.6301194004659406 0.0 6 1.278651380815626E-4 0.0 0.0 1.1722036533627254 0.0 7 1.278651380815626E-4 0.0 0.0 1.4185997744458965 0.0 8 1.278651380815626E-4 0.0 0.0 1.9039758386035082 0.0 9 1.278651380815626E-4 0.0 0.0 2.1820825139309066 0.0 10 1.278651380815626E-4 0.0 0.0 2.5856248897163185 0.0 11 1.278651380815626E-4 0.0 0.0 2.900620657380248 0.0 12 1.278651380815626E-4 0.0 0.0 3.1679866611087952 0.0 13 1.278651380815626E-4 0.0 0.0 3.3267951626060963 0.0 14 1.278651380815626E-4 0.0 0.0 3.4178990734892096 0.0 15 1.278651380815626E-4 0.0 0.0 3.500883548104144 0.0 16 1.278651380815626E-4 0.0 0.0 3.6201817219342414 0.0 17 1.278651380815626E-4 0.0 0.0 3.7534811283842706 0.0 18 1.278651380815626E-4 0.0 0.0 3.937159399238435 0.0 19 1.278651380815626E-4 0.0 0.0 4.037789262908625 0.0 20 1.278651380815626E-4 0.0 0.0 4.140656766495242 0.0 21 1.278651380815626E-4 0.0 0.0 4.264302355020114 0.0 22 1.278651380815626E-4 0.0 0.0 4.3965149077964485 0.0 23 1.278651380815626E-4 0.0 0.0 4.5484186918373455 0.0 24 1.278651380815626E-4 0.0 0.0 4.676667425333153 0.0 25 1.278651380815626E-4 0.0 0.0 4.784905264719195 0.0 26 1.278651380815626E-4 0.0 0.0 4.886046588941712 0.0 27 1.278651380815626E-4 0.0 0.0 5.004130043960035 0.0 28 1.278651380815626E-4 0.0 0.0 5.120295521907134 0.0 29 1.278651380815626E-4 0.0 0.0 5.242726391620231 0.0 30 1.278651380815626E-4 0.0 0.0 5.40223815137698 0.0 31 1.278651380815626E-4 0.0 0.0 5.527865649542115 0.0 32 1.278651380815626E-4 0.0 0.0 5.66985988538169 0.0 33 1.278651380815626E-4 0.0 0.0 5.802711763848434 0.0 34 1.278651380815626E-4 0.0 0.0 5.93332600239875 0.0 35 1.278651380815626E-4 0.0 0.0 6.079284057518854 0.0 36 1.9179770712234392E-4 0.0 0.0 6.206318072202886 0.0 37 1.9179770712234392E-4 0.0 0.0 6.344540286469055 0.0 38 1.9179770712234392E-4 0.0 0.0 6.503029125121152 0.0 39 1.9179770712234392E-4 0.0 0.0 6.727560307592376 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 20 7.0340687E-4 45.0 1 CGTTTTT 9540 0.0 41.721695 1 ACGGGAT 485 0.0 38.50515 5 TACGGGA 540 0.0 38.333332 4 CGTTCGA 60 1.5643309E-10 37.500004 14 ATTAGCG 90 0.0 37.5 1 GTTGATC 970 0.0 37.1134 16 GGGCGAT 3715 0.0 37.005383 7 GTAGCAT 955 0.0 36.98953 29 AGGGCGA 2055 0.0 36.78832 6 GGGTACC 1110 0.0 36.486485 7 ATAGCGG 185 0.0 36.486485 2 GGTACCT 1040 0.0 36.346157 8 TAAGGGA 1370 0.0 36.295624 4 GTACGGG 460 0.0 36.195652 3 TATACGG 175 0.0 36.0 2 AGGGTAC 745 0.0 35.939598 6 TTACGGG 420 0.0 35.892857 3 GGCGATT 860 0.0 35.843025 8 ACGTAGG 195 0.0 35.76923 2 >>END_MODULE