##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547088_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1479820 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.414926139665635 31.0 31.0 33.0 30.0 34.0 2 31.799141111756835 31.0 31.0 34.0 30.0 34.0 3 31.93117473746807 33.0 31.0 34.0 30.0 34.0 4 35.68930140152181 37.0 35.0 37.0 33.0 37.0 5 35.62491789541971 37.0 35.0 37.0 33.0 37.0 6 35.68218702274601 37.0 35.0 37.0 33.0 37.0 7 36.03691327323593 37.0 35.0 37.0 35.0 37.0 8 34.73556716357395 37.0 35.0 37.0 33.0 37.0 9 37.04058872024976 39.0 37.0 39.0 34.0 39.0 10 36.71098917435904 39.0 37.0 39.0 32.0 39.0 11 36.83330067170331 39.0 37.0 39.0 32.0 39.0 12 36.697904474868565 39.0 35.0 39.0 33.0 39.0 13 36.663924666513495 39.0 35.0 39.0 33.0 39.0 14 37.791705072238514 40.0 36.0 41.0 33.0 41.0 15 37.92329269776054 40.0 36.0 41.0 33.0 41.0 16 37.93894054682326 40.0 36.0 41.0 33.0 41.0 17 37.84827005987215 40.0 36.0 41.0 33.0 41.0 18 37.79985268478599 39.0 36.0 41.0 33.0 41.0 19 37.76377870281521 40.0 36.0 41.0 33.0 41.0 20 37.64342149720912 40.0 35.0 41.0 33.0 41.0 21 37.57125731507886 39.0 35.0 41.0 33.0 41.0 22 37.478227081672095 39.0 35.0 41.0 32.0 41.0 23 37.39787609303834 39.0 35.0 41.0 32.0 41.0 24 37.28114094957495 39.0 35.0 41.0 32.0 41.0 25 37.18096863132003 39.0 35.0 41.0 32.0 41.0 26 37.09595626495114 39.0 35.0 41.0 32.0 41.0 27 37.01175953832223 39.0 35.0 41.0 31.0 41.0 28 37.04271803327432 39.0 35.0 41.0 31.0 41.0 29 37.003727480369236 39.0 35.0 41.0 31.0 41.0 30 36.96966252652349 39.0 35.0 41.0 31.0 41.0 31 36.90164141584788 39.0 35.0 41.0 31.0 41.0 32 36.842989012177156 39.0 35.0 41.0 31.0 41.0 33 36.72476990444784 39.0 35.0 41.0 31.0 41.0 34 36.57907583354732 39.0 35.0 41.0 30.0 41.0 35 36.46658715249152 39.0 35.0 41.0 30.0 41.0 36 36.35593315403225 39.0 35.0 41.0 30.0 41.0 37 36.32142422727088 39.0 35.0 41.0 30.0 41.0 38 36.210338419537514 39.0 35.0 41.0 30.0 41.0 39 36.140271789812275 39.0 35.0 41.0 30.0 41.0 40 36.005473638685785 39.0 35.0 41.0 29.0 41.0 41 35.92149450608858 39.0 35.0 41.0 29.0 41.0 42 35.853175386195616 38.0 35.0 41.0 29.0 41.0 43 35.78085240096769 38.0 35.0 41.0 29.0 41.0 44 35.675415928964334 38.0 35.0 40.0 28.0 41.0 45 35.55092511251368 38.0 35.0 40.0 27.0 41.0 46 35.48779986755146 38.0 35.0 40.0 27.0 41.0 47 35.41892054439053 38.0 34.0 40.0 27.0 41.0 48 35.33982781689665 38.0 34.0 40.0 27.0 41.0 49 35.27792974821262 38.0 34.0 40.0 27.0 41.0 50 35.1942351096755 38.0 34.0 40.0 27.0 41.0 51 34.839101377194524 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 1.0 13 9.0 14 23.0 15 24.0 16 90.0 17 193.0 18 473.0 19 935.0 20 1617.0 21 2592.0 22 4072.0 23 6012.0 24 9039.0 25 13242.0 26 17680.0 27 21499.0 28 23576.0 29 26588.0 30 31322.0 31 37963.0 32 47121.0 33 60861.0 34 94214.0 35 142339.0 36 115403.0 37 153933.0 38 234980.0 39 433733.0 40 282.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.12296090065008 25.194753415955994 28.533267559568053 14.14901812382587 2 31.11182441107702 25.96248192347718 29.21253936289549 13.71315430255031 3 29.11293265397143 26.329959049073537 31.135273208903786 13.421835088051248 4 25.05183062804936 29.036031409225448 30.750631833601382 15.161506129123811 5 22.038558743630983 32.66336446324553 30.223608276682302 15.07446851644119 6 19.76889081104459 41.88597261829141 27.66329688745929 10.681839683204714 7 89.13259720776851 3.2498547120595753 6.171628981903204 1.4459190982687082 8 86.98517387249801 5.3232149856063575 5.572029030557771 2.1195821113378654 9 84.01893473530565 3.8668216404697873 9.18773904934384 2.926504574880729 10 34.03927504696517 22.644443243097136 27.888324255652712 15.427957454284979 11 31.935640821180954 25.422483815599193 24.075090213674635 18.566785149545215 12 28.291886851103516 24.56319011771702 27.03626116689868 20.10866186428079 13 23.882972253382167 28.36203051722507 28.754240380586825 19.000756848805935 14 21.016610128258844 30.656025732859405 29.277682420834967 19.04968171804679 15 20.593112675865985 25.075549729021095 35.39585895581895 18.93547863929397 16 22.061939965671503 22.757700260842533 35.00148666729737 20.17887310618859 17 21.239812950223676 23.10456677163439 30.091767917719725 25.563852360422214 18 23.068278574421214 24.254233623008204 31.481328810260706 21.196158992309876 19 26.178454136313878 25.873552188779712 27.31609249773621 20.6319011771702 20 27.201889418983388 25.608925409847146 26.660607371166762 20.528577800002704 21 24.963171196496873 26.973956291981455 28.58901758321958 19.47385492830209 22 23.949872281763998 23.46738116797989 28.856617696746902 23.72612885350921 23 21.773999540484652 27.628022327039776 28.07632009298428 22.521658039491292 24 21.52072549364112 26.579854306604854 32.13296211701423 19.766458082739792 25 22.388939195307536 26.77237772161479 29.953913313781406 20.884769769296266 26 20.459853225392276 29.231798461975107 27.837912719114488 22.470435593518133 27 20.923625846386724 28.017056128448054 29.03400413563812 22.025313889527105 28 19.97378059493722 27.816153315943833 32.07727966914895 20.132786419969996 29 19.985876660674947 26.614250381803195 31.22089173007528 22.17898122744658 30 21.60870916733116 27.81743725588247 30.088253976835023 20.485599599951346 31 24.800651430579396 27.112419077995973 27.09829573867092 20.988633752753714 32 24.56933951426525 27.69884175102377 26.947669311132433 20.784149423578544 33 23.753294319579407 26.706694057385356 26.98571447878796 22.554297144247272 34 20.541282047816626 28.762281899149894 28.516576340365717 22.179859712667756 35 20.914503115243747 26.907394142530848 28.72356097363193 23.45454176859348 36 23.993458663891552 28.043072806152097 26.03850468300199 21.92496384695436 37 21.542417321025532 28.618615777594574 27.691340838750662 22.14762606262924 38 22.053628143963454 29.630765903961294 26.16068170453163 22.15492424754362 39 21.8082604641105 27.90961062831966 26.369963914530146 23.912164993039696 40 22.727156005460124 26.382803313916558 27.97617277777027 22.91386790285305 41 21.130340176507953 25.141368544823017 28.568609695773812 25.159681582895217 42 22.311632495844087 27.902920625481475 26.507413063750995 23.27803381492344 43 21.706829208957846 26.79555621629658 27.89217607546864 23.60543849927694 44 22.013623278506845 27.341568569150304 28.487248449135706 22.15755970320715 45 20.75374031976862 28.66950034463651 27.634779905664203 22.94197942993067 46 22.429822545985324 27.65876930978092 27.976713384060226 21.934694760173535 47 21.660607371166762 27.24175913286751 28.62111608168561 22.476517414280114 48 21.725007095457556 27.379411009447097 29.013393520833613 21.882188374261734 49 22.117825140895516 26.095741373950887 29.081239610222866 22.705193874930735 50 20.96444162127826 27.575313213769242 28.86351042694382 22.596734738008678 51 20.56250084469733 28.526915435661092 27.976578232487736 22.934005487153843 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 862.0 1 1266.5 2 1671.0 3 7776.0 4 13881.0 5 9808.5 6 5736.0 7 5824.5 8 5913.0 9 6255.5 10 6598.0 11 6745.0 12 6892.0 13 6776.0 14 6660.0 15 6578.5 16 6497.0 17 6416.0 18 6335.0 19 6266.0 20 6197.0 21 6294.5 22 6392.0 23 6819.0 24 7246.0 25 8679.5 26 12406.5 27 14700.0 28 16137.0 29 17574.0 30 21213.0 31 24852.0 32 29081.5 33 33311.0 34 37202.5 35 41094.0 36 44475.0 37 47856.0 38 54820.5 39 61785.0 40 71859.5 41 81934.0 42 91421.0 43 100908.0 44 106504.5 45 112101.0 46 117543.0 47 122985.0 48 126379.0 49 129773.0 50 124519.0 51 119265.0 52 110938.5 53 102612.0 54 94190.5 55 85769.0 56 77970.5 57 70172.0 58 64081.5 59 57991.0 60 52322.0 61 46653.0 62 41784.5 63 36916.0 64 31349.0 65 25782.0 66 21636.5 67 17491.0 68 14542.0 69 11593.0 70 10429.5 71 9266.0 72 8178.0 73 7090.0 74 5800.5 75 3476.5 76 2442.0 77 1790.5 78 1139.0 79 923.5 80 708.0 81 513.5 82 319.0 83 224.0 84 129.0 85 93.0 86 57.0 87 43.5 88 30.0 89 17.0 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 5.5 96 10.0 97 5.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1479820.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.367532769866457 #Duplication Level Percentage of deduplicated Percentage of total 1 76.15901807748688 20.08125404878987 2 6.312069716631107 3.328674101979048 3 2.5933849955032025 2.05143491561432 4 1.6713182913342677 1.7627415926253407 5 1.2159602177786704 1.6030935444566523 6 0.9295851936708115 1.4706520833898669 7 0.8418046424155236 1.5537418046301923 8 0.7259210267434187 1.531259716879376 9 0.654798083028345 1.5538868920706062 >10 7.971052238106827 47.246899728396755 >50 0.8744589599142231 14.78032341087226 >100 0.04799165338943107 1.991717798849841 >500 0.001845832798105911 0.33533669129517063 >1k 5.273807994588317E-4 0.16540866443939684 >5k 2.6369039972941587E-4 0.5435750057113091 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7818 0.5283074968577259 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0272735873281885E-4 0.0 0.0 0.047911232447189527 0.0 2 2.0272735873281885E-4 0.0 0.0 0.14481490992147694 0.0 3 2.0272735873281885E-4 0.0 0.0 0.23192009839034478 0.0 4 2.0272735873281885E-4 0.0 0.0 0.39835925990998905 0.0 5 2.0272735873281885E-4 0.0 0.0 0.6412266356719061 0.0 6 2.0272735873281885E-4 0.0 0.0 1.2179183954805315 0.0 7 2.0272735873281885E-4 0.0 0.0 1.4607857712424483 0.0 8 2.0272735873281885E-4 0.0 0.0 2.1157978673081863 0.0 9 2.0272735873281885E-4 0.0 0.0 2.4334716384425135 0.0 10 2.0272735873281885E-4 0.0 0.0 2.9583327702017814 0.0 11 2.0272735873281885E-4 0.0 0.0 3.367774459055831 0.0 12 2.0272735873281885E-4 0.0 0.0 3.7078158154370127 0.0 13 2.0272735873281885E-4 0.0 0.0 3.8818234650160153 0.0 14 2.0272735873281885E-4 0.0 0.0 3.960751983349326 0.0 15 2.0272735873281885E-4 0.0 0.0 4.049884445405523 0.0 16 2.0272735873281885E-4 0.0 0.0 4.226257247503074 0.0 17 2.0272735873281885E-4 0.0 0.0 4.414523387979619 0.0 18 2.0272735873281885E-4 0.0 0.0 4.66583773702207 0.0 19 2.0272735873281885E-4 0.0 0.0 4.7841629387357925 0.0 20 6.081820761984566E-4 0.0 0.0 4.9124893568136665 0.0 21 6.081820761984566E-4 0.0 0.0 5.080212458271952 0.0 22 6.081820761984566E-4 0.0 0.0 5.258680109743077 0.0 23 6.081820761984566E-4 0.0 0.0 5.4563392845075755 0.0 24 6.081820761984566E-4 0.0 0.0 5.624805719614548 0.0 25 6.757578624427296E-4 0.0 0.0 5.7711072968333985 0.0 26 6.757578624427296E-4 0.0 0.0 5.906123717749456 0.0 27 6.757578624427296E-4 0.0 0.0 6.048438323579894 0.0 28 6.757578624427296E-4 0.0 0.0 6.194469597653769 0.0 29 6.757578624427296E-4 0.0 0.0 6.355570272060115 0.0 30 6.757578624427296E-4 0.0 0.0 6.568231271370842 0.0 31 6.757578624427296E-4 0.0 0.0 6.732778310875647 0.0 32 6.757578624427296E-4 0.0 0.0 6.9005014123339325 0.0 33 6.757578624427296E-4 0.0 0.0 7.064102390831318 0.0 34 6.757578624427296E-4 0.0 0.0 7.234393372166886 0.0 35 6.757578624427296E-4 0.0 0.0 7.429011636550391 0.0 36 6.757578624427296E-4 0.0 0.0 7.598762011596005 0.0 37 6.757578624427296E-4 0.0 0.0 7.783446635401603 0.0 38 6.757578624427296E-4 0.0 0.0 7.978605506075064 0.0 39 6.757578624427296E-4 0.0 0.0 8.212890756983958 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCGA 70 0.0 45.000004 14 CGCGAGT 20 7.0339453E-4 45.0 4 GCGTAAG 115 0.0 43.043476 1 CGTTTTT 5070 0.0 42.470417 1 CGCATCG 75 0.0 39.0 21 GACCGAT 790 0.0 38.449368 9 CGAGGGT 605 0.0 38.305786 4 GCGATAC 125 0.0 37.800003 9 ACGGGTA 490 0.0 37.65306 5 CACGACG 150 0.0 37.5 26 TTACGGG 420 0.0 37.5 3 TATAGCG 120 0.0 37.499996 1 CGAGGGA 685 0.0 37.445255 4 TAGGGTG 1755 0.0 37.307693 5 TACGGGT 465 0.0 37.258064 4 GGGCGAT 3285 0.0 37.19178 7 CGATACG 85 0.0 37.058823 10 TCGATAG 105 0.0 36.42857 1 CTAGGGT 890 0.0 36.40449 4 TAAGGGA 1235 0.0 36.255062 4 >>END_MODULE