##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547087_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 607676 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45420750531533 31.0 31.0 33.0 30.0 34.0 2 31.80845713834346 31.0 31.0 34.0 30.0 34.0 3 31.919383026481217 33.0 31.0 34.0 30.0 34.0 4 35.65437667441202 37.0 35.0 37.0 33.0 37.0 5 35.579851763110604 37.0 35.0 37.0 33.0 37.0 6 35.62576109637372 37.0 35.0 37.0 33.0 37.0 7 36.007082721713545 37.0 35.0 37.0 35.0 37.0 8 34.68216944555981 37.0 35.0 37.0 33.0 37.0 9 37.005851802605335 39.0 37.0 39.0 33.0 39.0 10 36.91208637497614 39.0 37.0 39.0 32.0 39.0 11 36.78128147236356 39.0 35.0 39.0 32.0 39.0 12 36.0820552399634 37.0 35.0 39.0 32.0 39.0 13 35.748839842284376 38.0 35.0 39.0 31.0 39.0 14 36.768065548088124 39.0 35.0 41.0 31.0 41.0 15 37.089465438819374 39.0 35.0 41.0 32.0 41.0 16 37.24132926098776 39.0 35.0 41.0 33.0 41.0 17 37.16056418222869 38.0 35.0 41.0 32.0 41.0 18 37.12309026520712 38.0 35.0 41.0 32.0 41.0 19 37.04677163488438 38.0 35.0 41.0 32.0 41.0 20 36.88701874024974 38.0 35.0 41.0 32.0 41.0 21 36.75564610088271 38.0 35.0 41.0 32.0 41.0 22 36.66059051204918 38.0 35.0 41.0 32.0 41.0 23 36.62023347968325 38.0 35.0 41.0 32.0 41.0 24 36.48656191786412 38.0 35.0 40.0 31.0 41.0 25 36.39184367985571 38.0 35.0 40.0 31.0 41.0 26 36.25386390115786 37.0 35.0 40.0 31.0 41.0 27 36.154488576149134 37.0 35.0 40.0 31.0 41.0 28 36.21138073578683 37.0 35.0 40.0 31.0 41.0 29 36.23441932872122 37.0 35.0 40.0 31.0 41.0 30 36.21634884379176 37.0 35.0 40.0 31.0 41.0 31 36.10273073150824 37.0 35.0 40.0 31.0 41.0 32 35.94310125790717 37.0 35.0 40.0 30.0 41.0 33 35.81976085940534 37.0 35.0 40.0 30.0 41.0 34 35.72967173296296 37.0 35.0 40.0 30.0 41.0 35 35.62749063645759 37.0 35.0 40.0 30.0 41.0 36 35.470838078186404 37.0 35.0 40.0 29.0 41.0 37 35.3812887130642 37.0 34.0 40.0 29.0 41.0 38 35.312421421941956 37.0 34.0 40.0 28.0 41.0 39 35.276061585450144 37.0 34.0 40.0 28.0 41.0 40 35.113280761458405 37.0 34.0 40.0 27.0 41.0 41 35.0670143300048 37.0 34.0 40.0 27.0 41.0 42 35.01052699135724 36.0 34.0 40.0 27.0 41.0 43 34.90334158334375 36.0 34.0 40.0 27.0 41.0 44 34.78223099151521 36.0 34.0 40.0 26.0 41.0 45 34.67859188119985 36.0 34.0 40.0 26.0 41.0 46 34.63177910597094 36.0 34.0 40.0 26.0 41.0 47 34.56736320012638 36.0 34.0 40.0 26.0 41.0 48 34.53599286461865 35.0 34.0 40.0 26.0 41.0 49 34.50805857068569 36.0 34.0 40.0 26.0 41.0 50 34.38239456552505 35.0 34.0 40.0 25.0 41.0 51 34.03041258828718 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 5.0 14 9.0 15 20.0 16 50.0 17 136.0 18 266.0 19 546.0 20 983.0 21 1438.0 22 2291.0 23 3302.0 24 4730.0 25 6499.0 26 8547.0 27 10253.0 28 11280.0 29 12764.0 30 14747.0 31 18043.0 32 22573.0 33 30016.0 34 53257.0 35 93977.0 36 41802.0 37 51505.0 38 76388.0 39 142114.0 40 133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.7215489833398 24.274778006700938 29.166364970806814 13.837308039152443 2 29.821154694277872 26.961077942851126 29.885827315872277 13.33194004699873 3 28.41876263008577 25.941126521369938 32.19857292372909 13.441537924815197 4 24.99358210625399 29.227088119326744 30.666012809457673 15.11331696496159 5 22.699761056878994 32.37926131688597 30.766230688722278 14.154746937512751 6 21.059577801328338 41.49793640031859 27.004357585292162 10.438128213060907 7 87.24797424943556 4.274481796220354 6.938401384948559 1.5391425693955332 8 85.009281261725 6.218774478504993 5.916310665552038 2.8556335942179714 9 83.05478577399799 5.514287218846885 8.514570264417221 2.9163567427379062 10 48.92475595547627 26.956634785642347 13.275166371553263 10.843442887328116 11 43.41738031450971 20.74510100777388 22.244748846424738 13.592769831291676 12 38.81821891929252 21.44037283025823 24.331551682146408 15.409856568302846 13 21.303786886432903 38.54455334750755 25.73460199185092 14.417057774208624 14 16.160256452451634 40.55483514241141 27.824037809622233 15.460870595514715 15 14.704217378998019 24.243511344861407 45.69918838328319 15.353082892857378 16 16.14824347185013 19.368874202700123 45.865230813788926 18.617651511660817 17 16.958379136250237 20.64603505815599 28.72896082780956 33.66662497778422 18 20.388167378668896 24.24433415175192 34.169524549266384 21.197973920312798 19 27.83736728124856 25.74464023591519 25.92302476977863 20.494967713057616 20 29.45632211902395 23.99782120735392 25.638004462904572 20.907852210717554 21 21.84404189074441 29.478044220933526 28.266543355340673 20.41137053298139 22 22.70354596857536 24.705106010439774 26.02044510561549 26.570902915369377 23 19.617197322257255 30.674734562497118 25.689018490116446 24.01904962512918 24 20.45004245683555 24.16912960195894 37.509462279240914 17.8713656619646 25 18.13499298968529 25.741349008353136 33.93979686543487 22.1838611365267 26 17.2613366333375 33.833490215180454 27.719376773148852 21.18579637833319 27 18.27964244103766 32.934491406604835 28.367584041495796 20.41828211086171 28 15.647647759661398 29.756975756817777 36.20662984880101 18.38874663471982 29 16.318729059564635 25.24470276923887 35.98496567249653 22.451602498699966 30 18.86943042015811 29.656264193418863 30.85427102600728 20.620034360415747 31 27.12860142575978 26.819719719060814 25.90475845680922 20.146920398370185 32 27.966218840303057 27.470395408079305 26.320275936518804 18.243109815098833 33 25.700208663827436 27.53589083656422 26.448469250060885 20.315431249547455 34 19.441116647687252 28.00768830758496 28.7078969714124 23.843298073315385 35 19.481434185322442 25.680132175698894 31.344663932753637 23.493769706225027 36 28.338292116193497 25.353806962921034 26.41506329030602 19.892837630579454 37 20.36677439951553 30.6205938691013 29.035538675215083 19.97709305616809 38 20.749544164982655 31.39600708272171 25.85999776196526 21.994450990330375 39 20.059373745219492 30.833207169610123 26.928494789986768 22.178924295183617 40 23.88229911992575 25.427201337554884 26.969799695890572 23.720699846628797 41 17.478063968298898 24.143128904218695 28.315582646015308 30.0632244814671 42 22.37557514201647 26.545066779007232 25.03735543282934 26.042002646146962 43 22.623240016061192 26.504913802750153 26.869746378004066 24.002099803184592 44 20.557830159492887 29.6352003370217 28.470764025566254 21.336205477919155 45 18.17596877283289 33.9885070333533 24.451023242649043 23.384500951164767 46 22.563504235809873 30.525641953935978 26.36240364931312 20.54845016094103 47 22.520882838881246 26.174145432763513 27.61833608699373 23.686635641361516 48 22.93952698477478 23.31308131306815 30.946425397744854 22.80096630441222 49 20.928422382980404 23.9030338535667 31.915362792014168 23.253180971438727 50 18.914191115002073 30.625201587688178 27.997485502142588 22.46312179516716 51 18.461811886597463 31.670824584153394 25.792363035565003 24.075000493684133 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 724.0 1 1008.0 2 1292.0 3 3589.5 4 5887.0 5 4187.5 6 2488.0 7 2579.5 8 2671.0 9 2875.0 10 3079.0 11 3223.5 12 3368.0 13 3306.5 14 3245.0 15 3176.5 16 3108.0 17 2992.5 18 2877.0 19 2688.5 20 2500.0 21 2624.0 22 2748.0 23 3096.5 24 3445.0 25 3483.0 26 4378.5 27 5236.0 28 6120.5 29 7005.0 30 7442.0 31 7879.0 32 9777.0 33 11675.0 34 13342.0 35 15009.0 36 15912.5 37 16816.0 38 19520.0 39 22224.0 40 30918.0 41 39612.0 42 47677.5 43 55743.0 44 57161.0 45 58579.0 46 59321.5 47 60064.0 48 57877.5 49 55691.0 50 51946.0 51 48201.0 52 42082.0 53 35963.0 54 31203.5 55 26444.0 56 24889.0 57 23334.0 58 21389.5 59 19445.0 60 18265.5 61 17086.0 62 14825.5 63 12565.0 64 10967.5 65 9370.0 66 7866.0 67 6362.0 68 5242.0 69 4122.0 70 3519.0 71 2916.0 72 2673.0 73 2430.0 74 1846.5 75 969.5 76 676.0 77 572.0 78 468.0 79 393.0 80 318.0 81 237.0 82 156.0 83 104.5 84 53.0 85 30.5 86 8.0 87 6.5 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 607676.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.29454843671216 #Duplication Level Percentage of deduplicated Percentage of total 1 79.0094812154939 21.565281119957977 2 6.419762546472753 3.504490395537823 3 2.3066444817033824 1.8887645859638333 4 1.2657341228957908 1.3819056530151415 5 0.8285311590434373 1.1307191925918183 6 0.630379566872601 1.0323555372910704 7 0.527766739367898 1.0083608381673912 8 0.4515205065722746 0.9859238669444609 9 0.3841727502959516 0.9437239566915998 >10 7.316086193495288 49.89162123660424 >50 0.8091211308997219 13.554629550750263 >100 0.047739370809514604 2.048254389649231 >500 0.0018361296465197923 0.26979290753474505 >1k 0.001224086431013195 0.7941767693004198 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3551 0.5843574536430598 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1203 0.19796733785767415 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0724070063652341 0.0 2 0.0 0.0 0.0 0.25293083814401096 0.0 3 0.0 0.0 0.0 0.3758581875868061 0.0 4 0.0 0.0 0.0 0.7064619961953409 0.0 5 0.0 0.0 0.0 1.1226377214173342 0.0 6 0.0 0.0 0.0 1.8708983076507877 0.0 7 0.0 0.0 0.0 2.1945905383790048 0.0 8 0.0 0.0 0.0 3.094576715223244 0.0 9 0.0 0.0 0.0 3.441142977507751 0.0 10 0.0 0.0 0.0 4.002297276838315 0.0 11 0.0 0.0 0.0 4.511779303444599 0.0 12 0.0 0.0 0.0 4.954120287784938 0.0 13 0.0 0.0 0.0 5.158340958010519 0.0 14 0.0 0.0 0.0 5.237330419499865 0.0 15 0.0 0.0 0.0 5.319611108551268 0.0 16 0.0 0.0 0.0 5.505565465807437 0.0 17 0.0 0.0 0.0 5.710608942923532 0.0 18 0.0 0.0 0.0 6.004351002837038 0.0 19 0.0 0.0 0.0 6.133202561891534 0.0 20 0.0 0.0 0.0 6.263699734727059 0.0 21 0.0 0.0 0.0 6.441261461699985 0.0 22 0.0 0.0 0.0 6.636595817508014 0.0 23 0.0 0.0 0.0 6.865007010314708 0.0 24 0.0 0.0 0.0 7.038783825591269 0.0 25 0.0 0.0 0.0 7.165331525352326 0.0 26 0.0 0.0 0.0 7.299284487128009 0.0 27 0.0 0.0 0.0 7.419743415899262 0.0 28 0.0 0.0 0.0 7.5382276081332815 0.0 29 0.0 0.0 0.0 7.677940218142563 0.0 30 0.0 0.0 0.0 7.870312469144742 0.0 31 0.0 0.0 0.0 8.044582968555613 0.0 32 0.0 0.0 0.0 8.190384349554696 0.0 33 0.0 0.0 0.0 8.336514853309987 0.0 34 0.0 0.0 0.0 8.478695883990811 0.0 35 0.0 0.0 0.0 8.680612694922953 0.0 36 0.0 0.0 0.0 8.833161092424252 0.0 37 0.0 0.0 0.0 8.992291945049665 0.0 38 0.0 0.0 0.0 9.142536483257526 0.0 39 0.0 0.0 0.0 9.301996458639143 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTAGG 35 1.2106648E-7 45.000004 2 GCTACGA 35 1.2106648E-7 45.000004 10 CGGGTCA 25 3.8886283E-5 45.0 6 AGATCTA 20 7.0306583E-4 45.0 13 CGCATCG 20 7.0306583E-4 45.0 21 GTAGGAC 20 7.0306583E-4 45.0 14 TAACGCA 20 7.0306583E-4 45.0 13 GACTTAG 20 7.0306583E-4 45.0 1 CGTAGTG 20 7.0306583E-4 45.0 33 TATAGCG 20 7.0306583E-4 45.0 1 TAATGCG 50 2.1827873E-11 45.0 1 ATACCGG 25 3.8886283E-5 45.0 2 CGGACCG 20 7.0306583E-4 45.0 30 ATTCGCA 30 2.1638061E-6 44.999996 14 CGAATAT 30 2.1638061E-6 44.999996 14 TAGTGCG 30 2.1638061E-6 44.999996 1 ATAACGG 75 0.0 42.0 2 CGTATGG 65 0.0 41.53846 2 TAGGGCG 180 0.0 41.25 5 AATGCGG 120 0.0 41.249996 2 >>END_MODULE