SRR1547086_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547086_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	982887
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6557	0.6671163623081798	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCACGA	45	3.8380676E-10	45.0	24
ATCGGAT	20	7.0327875E-4	45.0	11
TCGACTA	20	7.0327875E-4	45.0	21
TATACGG	65	0.0	41.53846	2
CGTTTTT	3805	0.0	40.565044	1
CGTTTAT	85	0.0	39.705883	39
AGGGCGA	1240	0.0	39.012096	6
GAACGTA	35	6.2473664E-6	38.571426	10
CACGACC	970	0.0	38.505157	27
TAACGCC	95	0.0	37.894737	12
AACGAGC	375	0.0	37.8	15
ACGACCA	1000	0.0	37.575	28
CGTTAGG	150	0.0	37.500004	2
CATACGA	90	0.0	37.5	18
ACGGGAT	240	0.0	37.499996	5
TACGATG	30	1.1398016E-4	37.499996	1
CGGTCTA	60	1.546141E-10	37.499996	31
TATACGT	30	1.1398016E-4	37.499996	10
GGGCGAT	2670	0.0	37.41573	7
GACACGA	1000	0.0	37.350002	25