##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547086_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 982887 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.459214538395564 31.0 31.0 33.0 30.0 34.0 2 31.83377438098174 31.0 31.0 34.0 30.0 34.0 3 31.926853239487347 33.0 31.0 34.0 30.0 34.0 4 35.68091347225062 37.0 35.0 37.0 33.0 37.0 5 35.617751582837094 37.0 35.0 37.0 33.0 37.0 6 35.65539070106737 37.0 35.0 37.0 33.0 37.0 7 36.01324669061652 37.0 35.0 37.0 35.0 37.0 8 34.68779015288634 37.0 35.0 37.0 33.0 37.0 9 36.990104661064805 39.0 37.0 39.0 33.0 39.0 10 36.90757330191568 39.0 37.0 39.0 32.0 39.0 11 36.81732488068313 39.0 37.0 39.0 32.0 39.0 12 36.46507380807763 39.0 35.0 39.0 32.0 39.0 13 36.355852707381416 39.0 35.0 39.0 32.0 39.0 14 37.377043342724036 40.0 35.0 41.0 32.0 41.0 15 37.57324188843682 40.0 35.0 41.0 32.0 41.0 16 37.63130858379448 40.0 35.0 41.0 33.0 41.0 17 37.52001908662949 39.0 35.0 41.0 32.0 41.0 18 37.44857343723134 39.0 36.0 41.0 32.0 41.0 19 37.39751670334433 39.0 35.0 41.0 32.0 41.0 20 37.26768387413813 39.0 35.0 41.0 32.0 41.0 21 37.14893268503907 39.0 35.0 41.0 32.0 41.0 22 37.05500225356526 39.0 35.0 41.0 32.0 41.0 23 36.977756344320355 39.0 35.0 41.0 32.0 41.0 24 36.82647038774549 38.0 35.0 41.0 31.0 41.0 25 36.72636528919398 38.0 35.0 41.0 31.0 41.0 26 36.612404070864706 38.0 35.0 41.0 31.0 41.0 27 36.504132214588246 38.0 35.0 41.0 31.0 41.0 28 36.52420064564899 38.0 35.0 41.0 31.0 41.0 29 36.477875890107406 38.0 35.0 41.0 31.0 41.0 30 36.40725129134885 38.0 35.0 40.0 31.0 41.0 31 36.293108973869835 38.0 35.0 40.0 30.0 41.0 32 36.2167766996613 38.0 35.0 41.0 30.0 41.0 33 36.081242299470844 38.0 35.0 41.0 30.0 41.0 34 35.90551100991264 38.0 35.0 41.0 29.0 41.0 35 35.77124023412661 38.0 35.0 41.0 29.0 41.0 36 35.64265678557148 38.0 35.0 40.0 28.0 41.0 37 35.58773694229347 38.0 35.0 40.0 28.0 41.0 38 35.46039575251275 38.0 34.0 40.0 27.0 41.0 39 35.38565165680287 38.0 34.0 40.0 27.0 41.0 40 35.231150681614466 38.0 34.0 40.0 27.0 41.0 41 35.13397877884233 37.0 34.0 40.0 26.0 41.0 42 35.04886014363808 37.0 34.0 40.0 26.0 41.0 43 34.95212471016505 37.0 34.0 40.0 26.0 41.0 44 34.82119307712891 37.0 34.0 40.0 26.0 41.0 45 34.68235005651718 36.0 34.0 40.0 25.0 41.0 46 34.60704638478279 36.0 34.0 40.0 25.0 41.0 47 34.526875419046135 36.0 34.0 40.0 25.0 41.0 48 34.44223700181201 36.0 34.0 40.0 24.0 41.0 49 34.355505770246225 36.0 34.0 40.0 24.0 41.0 50 34.262358745206726 35.0 34.0 40.0 24.0 41.0 51 33.895021502980505 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 3.0 13 7.0 14 15.0 15 32.0 16 103.0 17 199.0 18 486.0 19 866.0 20 1607.0 21 2389.0 22 3613.0 23 5155.0 24 7666.0 25 10745.0 26 13897.0 27 16450.0 28 18220.0 29 20276.0 30 23752.0 31 28022.0 32 34910.0 33 45355.0 34 75450.0 35 110256.0 36 80017.0 37 103646.0 38 145566.0 39 234003.0 40 175.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.67854086990671 23.720224196677748 27.487493475852258 15.113741457563282 2 33.490726807862956 25.553293511868606 26.931071425301177 14.024908254967256 3 29.56260485691641 25.692882294709364 30.743005045340922 14.00150780303331 4 25.873879703363663 28.368571361712995 29.88756591551216 15.869983019411183 5 23.79653001820148 31.732640679956088 29.207426692997263 15.263402608845167 6 21.95471096880923 39.99961338383761 26.99313349347382 11.052542153879337 7 86.93013540722382 3.83930197469292 7.3984089727506825 1.8321536453325766 8 84.57035244132845 6.018189273029352 6.988494099525175 2.4229641861170204 9 82.11788333755558 5.048189669819624 9.46650021823465 3.3674267743901387 10 43.644081160906595 27.507129507257698 15.402279204018365 13.446510127817337 11 36.27344750719055 25.735511813667287 22.337766192858385 15.653274486283774 12 31.162076617149275 23.249162925137885 26.95660844023779 18.63215201747505 13 24.078454593457842 29.411926294680875 28.96039931345109 17.549219798410192 14 20.790080650166296 30.663748732051598 30.512154499957777 18.03401611782433 15 20.12123468923691 23.067758552102124 37.90730775765678 18.903699001004185 16 23.585213763128415 21.93161574016138 35.439577489579165 19.043593007131033 17 23.18038594467116 22.04332746287213 28.893351931605565 25.88293466085115 18 25.717300157596956 22.628643984506866 29.959700352125928 21.694355505770247 19 28.578666723641682 24.808548693796947 25.79370772021606 20.819076862345316 20 29.994495806740755 24.619106774227355 25.18020891516522 20.20618850386667 21 27.04827716716164 25.706312119297536 27.357264873785088 19.88814583975574 22 26.351554146102245 22.977005495036558 26.821191042307003 23.85024931655419 23 24.385000513792534 26.87185810779876 26.380448617185902 22.362692761222807 24 23.083426680788328 25.140224664686784 31.321810136872298 20.45453851765259 25 23.743421166420962 25.119876445613787 29.250259694145917 21.88644269381933 26 21.46014750424006 28.349851000165838 26.85741087225693 23.33259062333717 27 22.682566765050304 26.390317503436307 27.88255414915448 23.04456158235891 28 21.523735688843175 26.595020587310646 30.732830935804422 21.14841278804176 29 22.27000662334531 24.85941924147944 30.60636675426575 22.264207380909504 30 24.435871061475023 25.268214962655932 29.739329139565385 20.556584836303664 31 27.556066974128257 24.94691658349332 26.552492809448086 20.944523632930338 32 27.995791988295704 25.0710407198386 26.402221211594007 20.53094608027169 33 26.802877645141304 25.1413438167358 25.724422034272504 22.33135650385039 34 22.82500429856128 27.052346810976236 28.86242263861461 21.26022625184787 35 23.379493268300426 26.809694298530758 28.774721814409997 21.03609061875882 36 27.013786935832908 26.84184448466609 25.360087171770505 20.784281407730493 37 24.637725394679144 27.73136688144212 26.521868739743226 21.109038984135513 38 24.273187049986415 28.59809927285639 25.645267462078554 21.48344621507864 39 24.433734498472358 26.56999227785086 25.478819030061437 23.51745419361534 40 25.768577669660907 25.40994030849935 25.832267595359387 22.98921442648036 41 22.30744734643962 25.212257360205193 27.062724402703463 25.417570890651724 42 24.66560245480915 26.113581724043556 25.851700144574096 23.369115676573195 43 24.07469017292934 25.213579994444935 26.954675359425856 23.757054473199872 44 23.833563776914335 26.87185810779876 27.247791455172365 22.046786660114538 45 22.453751041574463 27.83900896033827 25.446974067212203 24.260265930875065 46 24.046100925131782 26.78771822193192 26.724537001710267 22.441643851226033 47 23.726735626781107 26.195178082526272 28.187268729772597 21.890817560920027 48 24.524182332251826 25.71902975621816 27.85884847393444 21.897939437595575 49 23.982919704910127 25.049776830907316 28.226439051488118 22.74086441269444 50 22.012601652071908 27.763618808672817 27.528291655093618 22.695487884161658 51 22.754701201664076 28.01288449231702 25.91945971408717 23.312954591931728 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 976.0 1 1309.0 2 1642.0 3 6262.5 4 10883.0 5 7474.5 6 4066.0 7 4144.0 8 4222.0 9 4397.5 10 4573.0 11 4831.5 12 5090.0 13 5054.0 14 5018.0 15 4857.0 16 4696.0 17 4669.0 18 4642.0 19 4562.0 20 4482.0 21 4590.5 22 4699.0 23 5009.0 24 5319.0 25 5610.5 26 6905.0 27 7908.0 28 8921.5 29 9935.0 30 11243.0 31 12551.0 32 15062.0 33 17573.0 34 19097.0 35 20621.0 36 22620.5 37 24620.0 38 27853.0 39 31086.0 40 37417.5 41 43749.0 42 52008.5 43 60268.0 44 62041.5 45 63815.0 46 66399.0 47 68983.0 48 71335.0 49 73687.0 50 74035.0 51 74383.0 52 71367.5 53 68352.0 54 64586.0 55 60820.0 56 57140.5 57 53461.0 58 50240.5 59 47020.0 60 44720.5 61 42421.0 62 38666.0 63 34911.0 64 31987.5 65 29064.0 66 25721.0 67 22378.0 68 19014.0 69 15650.0 70 13653.0 71 11656.0 72 10046.5 73 8437.0 74 7257.5 75 4906.5 76 3735.0 77 2859.5 78 1984.0 79 1369.5 80 755.0 81 573.5 82 392.0 83 286.5 84 181.0 85 141.5 86 102.0 87 80.0 88 58.0 89 39.0 90 20.0 91 18.0 92 16.0 93 10.5 94 5.0 95 3.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 982887.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.410700173596975 #Duplication Level Percentage of deduplicated Percentage of total 1 75.15622954984738 21.35241103918743 2 6.113274801670678 3.473648349381423 3 2.616465660617058 2.2300686419491074 4 1.7056203880759648 1.938314778224014 5 1.265723551773494 1.7980046166048491 6 1.0460378319808223 1.7831200328787933 7 0.8814424508829487 1.752967803462115 8 0.7799915109945091 1.7728083965452692 9 0.69083423226281 1.7664375818228175 >10 9.514709821258608 56.401258886975526 >50 0.19976138635646828 3.452843281615863 >100 0.028801080417064084 1.4588086811269034 >500 7.384892414631539E-4 0.13144594257528908 >1k 0.0 0.0 >5k 3.6924462073157694E-4 0.687861967650575 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6557 0.6671163623081798 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018415138261061545 0.0 2 0.0 0.0 0.0 0.08780256529997853 0.0 3 0.0 0.0 0.0 0.16766932516148855 0.0 4 0.0 0.0 0.0 0.3165165476804556 0.0 5 0.0 0.0 0.0 0.53353030409396 0.0 6 0.0 0.0 0.0 1.0711302520025192 0.0 7 0.0 0.0 0.0 1.3268056246547162 0.0 8 0.0 0.0 0.0 1.8858729436852864 0.0 9 0.0 0.0 0.0 2.228435211779177 0.0 10 0.0 0.0 0.0 2.7214725599178746 0.0 11 0.0 0.0 0.0 3.107986981209437 0.0 12 0.0 0.0 0.0 3.4094458467758755 0.0 13 0.0 0.0 0.0 3.5865770938063073 0.0 14 0.0 0.0 0.0 3.673769212534096 0.0 15 0.0 0.0 0.0 3.748345435436627 0.0 16 0.0 0.0 0.0 3.8687051512533994 0.0 17 1.0174109536498091E-4 0.0 0.0 3.991404912263566 0.0 18 1.0174109536498091E-4 0.0 0.0 4.153885441561441 0.0 19 1.0174109536498091E-4 0.0 0.0 4.236600952093171 0.0 20 1.0174109536498091E-4 0.0 0.0 4.329795795447493 0.0 21 1.0174109536498091E-4 0.0 0.0 4.439777919537037 0.0 22 1.0174109536498091E-4 0.0 0.0 4.55952718878162 0.0 23 1.0174109536498091E-4 0.0 0.0 4.693214988091205 0.0 24 1.0174109536498091E-4 0.0 0.0 4.8119468463821375 0.0 25 1.0174109536498091E-4 0.0 0.0 4.90819392259741 0.0 26 1.0174109536498091E-4 0.0 0.0 5.007798454959726 0.0 27 1.0174109536498091E-4 0.0 0.0 5.113507453043941 0.0 28 1.0174109536498091E-4 0.0 0.0 5.217995557983777 0.0 29 1.0174109536498091E-4 0.0 0.0 5.3293003163130654 0.0 30 1.0174109536498091E-4 0.0 0.0 5.485167674412216 0.0 31 1.0174109536498091E-4 0.0 0.0 5.607053506659463 0.0 32 1.0174109536498091E-4 0.0 0.0 5.739927377206128 0.0 33 1.0174109536498091E-4 0.0 0.0 5.859167940973886 0.0 34 1.0174109536498091E-4 0.0 0.0 5.985123417035733 0.0 35 1.0174109536498091E-4 0.0 0.0 6.121863449206267 0.0 36 1.0174109536498091E-4 0.0 0.0 6.244563210216434 0.0 37 1.0174109536498091E-4 0.0 0.0 6.382320653340618 0.0 38 1.0174109536498091E-4 0.0 0.0 6.550193460692837 0.0 39 1.0174109536498091E-4 0.0 0.0 6.828048392134599 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACGA 45 3.8380676E-10 45.0 24 ATCGGAT 20 7.0327875E-4 45.0 11 TCGACTA 20 7.0327875E-4 45.0 21 TATACGG 65 0.0 41.53846 2 CGTTTTT 3805 0.0 40.565044 1 CGTTTAT 85 0.0 39.705883 39 AGGGCGA 1240 0.0 39.012096 6 GAACGTA 35 6.2473664E-6 38.571426 10 CACGACC 970 0.0 38.505157 27 TAACGCC 95 0.0 37.894737 12 AACGAGC 375 0.0 37.8 15 ACGACCA 1000 0.0 37.575 28 CGTTAGG 150 0.0 37.500004 2 CATACGA 90 0.0 37.5 18 ACGGGAT 240 0.0 37.499996 5 TACGATG 30 1.1398016E-4 37.499996 1 CGGTCTA 60 1.546141E-10 37.499996 31 TATACGT 30 1.1398016E-4 37.499996 10 GGGCGAT 2670 0.0 37.41573 7 GACACGA 1000 0.0 37.350002 25 >>END_MODULE