##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547085_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 894616 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.495243769393795 31.0 31.0 33.0 30.0 34.0 2 31.86330671483631 31.0 31.0 34.0 30.0 34.0 3 31.954434081214732 33.0 31.0 34.0 30.0 34.0 4 35.72031687338478 37.0 35.0 37.0 33.0 37.0 5 35.66272009443158 37.0 35.0 37.0 33.0 37.0 6 35.71455015336189 37.0 35.0 37.0 33.0 37.0 7 36.03773462580593 37.0 35.0 37.0 35.0 37.0 8 34.725184883793716 37.0 35.0 37.0 33.0 37.0 9 37.03660900319243 39.0 37.0 39.0 34.0 39.0 10 36.96145161723019 39.0 37.0 39.0 32.0 39.0 11 36.88312192046644 39.0 37.0 39.0 33.0 39.0 12 36.57727896661808 39.0 35.0 39.0 32.0 39.0 13 36.49241462258667 39.0 35.0 39.0 32.0 39.0 14 37.55886659751223 40.0 36.0 41.0 32.0 41.0 15 37.73297817164012 40.0 36.0 41.0 33.0 41.0 16 37.77869722875513 40.0 36.0 41.0 33.0 41.0 17 37.68697519382618 40.0 35.0 41.0 33.0 41.0 18 37.606117037924655 39.0 36.0 41.0 33.0 41.0 19 37.531225687892906 39.0 36.0 41.0 33.0 41.0 20 37.38769594999419 39.0 35.0 41.0 32.0 41.0 21 37.294898593362966 39.0 35.0 41.0 32.0 41.0 22 37.21866365010239 39.0 35.0 41.0 32.0 41.0 23 37.13211590224186 39.0 35.0 41.0 32.0 41.0 24 36.98120646176684 39.0 35.0 41.0 32.0 41.0 25 36.87486698203475 38.0 35.0 41.0 31.0 41.0 26 36.77328932189901 38.0 35.0 41.0 31.0 41.0 27 36.66270556305722 38.0 35.0 41.0 31.0 41.0 28 36.69138378924589 38.0 35.0 41.0 31.0 41.0 29 36.61824626431899 38.0 35.0 41.0 31.0 41.0 30 36.54349352124263 38.0 35.0 41.0 31.0 41.0 31 36.42009979700788 38.0 35.0 41.0 31.0 41.0 32 36.324721444731594 38.0 35.0 41.0 30.0 41.0 33 36.148705142765166 38.0 35.0 41.0 30.0 41.0 34 35.94044148550886 38.0 35.0 41.0 29.0 41.0 35 35.76560110706717 38.0 35.0 41.0 29.0 41.0 36 35.62069983098894 38.0 35.0 41.0 28.0 41.0 37 35.541273574360396 38.0 35.0 41.0 27.0 41.0 38 35.433435127473686 38.0 35.0 40.0 27.0 41.0 39 35.32745669650442 38.0 35.0 40.0 27.0 41.0 40 35.173459897877976 38.0 34.0 40.0 26.0 41.0 41 35.073510869468016 38.0 34.0 40.0 25.0 41.0 42 35.0154099636045 38.0 34.0 40.0 25.0 41.0 43 34.91374511522262 37.0 34.0 40.0 25.0 41.0 44 34.786163001779535 37.0 34.0 40.0 24.0 41.0 45 34.65587469931233 37.0 34.0 40.0 24.0 41.0 46 34.58833734250226 37.0 34.0 40.0 24.0 41.0 47 34.493287622846005 36.0 34.0 40.0 23.0 41.0 48 34.41635629141442 36.0 34.0 40.0 23.0 41.0 49 34.333963398821396 36.0 34.0 40.0 24.0 41.0 50 34.21180372360879 36.0 34.0 40.0 24.0 41.0 51 33.84552366601984 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 3.0 12 1.0 13 5.0 14 11.0 15 37.0 16 79.0 17 166.0 18 379.0 19 728.0 20 1302.0 21 2106.0 22 3277.0 23 4788.0 24 7077.0 25 10362.0 26 13459.0 27 15300.0 28 16316.0 29 18029.0 30 20532.0 31 24713.0 32 30543.0 33 39954.0 34 66182.0 35 96252.0 36 71994.0 37 94289.0 38 134261.0 39 222316.0 40 154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.07605497777818 23.524506603950744 26.550609423484488 14.84882899478659 2 33.88381160184928 25.061926010712977 27.789912096363135 13.264350291074607 3 29.67664338665975 25.56549402201615 31.082945084818515 13.674917506505585 4 25.623954858844467 28.711983689091188 30.712395038765234 14.951666413299114 5 23.548874600946103 31.987243688912336 29.829669936598496 14.634211773543063 6 21.776829388251496 40.595629856832424 26.927866257701627 10.699674497214447 7 86.1365099662872 3.962705786616828 8.146064903824659 1.754719343271303 8 83.55529076162287 6.2136156742110575 7.532170227225983 2.6989233369400947 9 80.79332361594248 5.400305829540272 10.389709104241373 3.416661450275873 10 42.969944646641686 26.106284707628745 17.379635508419256 13.54413513731031 11 34.661128350040684 25.649440653867135 24.129235336725475 15.560195659366698 12 30.086763482879807 23.193638387866976 28.18863065270462 18.5309674765486 13 23.4947731764243 28.63519096461499 30.15003085122555 17.72000500773516 14 20.363150223112488 29.810555590331493 31.261233870174465 18.565060316381555 15 19.780665671081223 23.94133348833466 37.70746331386874 18.570537526715373 16 22.563759199477765 22.336622640328365 35.76227118674381 19.33734697345006 17 22.47344111887111 22.894627415561537 29.978784193441655 24.653147272125693 18 24.187137274540138 23.228960805529972 31.627089164513045 20.95681275541685 19 27.08916451304247 25.631891224838366 26.897238591753332 20.381705670365832 20 28.302087152476595 25.297334275264472 26.425974943439417 19.974603628819516 21 25.58360235005857 26.72353277830935 28.406042369016426 19.286822502615646 22 25.140842551441068 23.56709470879126 27.80980890124925 23.482253838518428 23 23.051119139384944 27.279749076698828 27.251021667396962 22.418110116519266 24 22.248875495184524 25.304599962441987 32.399822940792475 20.046701601581013 25 22.991428724726585 25.614230016006868 29.624330438981637 21.770010820284906 26 21.402367049102633 28.026214599336473 28.256592772765078 22.31482557879582 27 21.594404750194496 26.865269568172266 28.63206113013852 22.90826455149472 28 20.839108623141104 27.241967503375754 30.713736396398005 21.20518747708514 29 21.879555026961288 24.883972564765216 30.843065628157778 22.393406780115715 30 23.53601992363204 26.023455873805073 30.178981820132883 20.261542382430004 31 25.476293739436805 26.704418432042353 27.049818022481155 20.769469806039687 32 27.561881298791885 24.7952194013968 27.12638718735189 20.516512112459424 33 25.668331440528675 26.04324089888846 25.926766344442754 22.36166131614011 34 23.291892834467525 26.42262154935749 28.654193531079258 21.631292085095726 35 22.35719012403087 27.654546755255886 28.43868207141388 21.549581049299366 36 26.531271517612026 27.643145215377324 25.206680855249626 20.618902411761024 37 23.316372611265614 29.020495944628756 26.17804734098205 21.485084103123576 38 23.951058331172256 29.064984306115697 25.51541667039266 21.468540692319387 39 22.81671689305803 28.15599095030717 25.40721382134905 23.620078335285754 40 24.981332772943922 25.727462956173376 26.80658517173849 22.484619099144215 41 21.167629463367525 25.476070179831346 27.420032729126238 25.93626762767489 42 23.30217657631878 26.518975739311617 26.157591637082277 24.021256047287327 43 22.81246926055425 25.365743514535843 27.994245575755407 23.827541649154497 44 23.14099010078067 26.949998658642365 27.409301868064063 22.4997093725129 45 21.718703890831375 27.75067738560455 26.363042914501868 24.16757580906221 46 23.282726890643584 27.015166283634546 27.352070609065787 22.350036216656086 47 22.88378477469663 26.1407128868699 28.17119300347859 22.804309334954887 48 23.26215940694108 25.349088323928925 28.76329061854472 22.62546165058528 49 23.219571302100565 25.14944959625135 28.4809348368462 23.15004426480188 50 21.980827528235576 27.38649878830694 28.35831239325029 22.274361290207196 51 21.678686721453673 27.562216638200077 27.173893603512568 23.58520303683368 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1086.0 1 1392.0 2 1698.0 3 6190.5 4 10683.0 5 7567.0 6 4451.0 7 4547.0 8 4643.0 9 4990.0 10 5337.0 11 5431.5 12 5526.0 13 5599.5 14 5673.0 15 5560.0 16 5447.0 17 5238.5 18 5030.0 19 5011.0 20 4992.0 21 4896.0 22 4800.0 23 5017.0 24 5234.0 25 5381.5 26 6327.0 27 7125.0 28 8533.5 29 9942.0 30 11632.5 31 13323.0 32 14955.5 33 16588.0 34 18899.0 35 21210.0 36 23863.0 37 26516.0 38 28881.0 39 31246.0 40 36514.0 41 41782.0 42 47348.5 43 52915.0 44 55212.5 45 57510.0 46 60742.0 47 63974.0 48 66606.5 49 69239.0 50 68048.0 51 66857.0 52 62583.0 53 58309.0 54 53760.5 55 49212.0 56 47227.5 57 45243.0 58 42991.0 59 40739.0 60 38572.0 61 36405.0 62 33367.5 63 30330.0 64 27148.0 65 23966.0 66 21503.0 67 19040.0 68 16276.0 69 13512.0 70 12100.0 71 10688.0 72 8968.5 73 7249.0 74 6281.0 75 4271.5 76 3230.0 77 2284.0 78 1338.0 79 1086.0 80 834.0 81 667.0 82 500.0 83 365.5 84 231.0 85 151.0 86 71.0 87 44.5 88 18.0 89 16.0 90 14.0 91 15.5 92 17.0 93 9.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 894616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.884284045078633 #Duplication Level Percentage of deduplicated Percentage of total 1 74.03286818800751 21.383863934142745 2 6.265524330303114 3.6195036889565246 3 2.807702277752523 2.4329541031385444 4 1.8969859802862359 2.191723275364783 5 1.4496928937852194 2.0936670661112142 6 1.1868886715411422 2.0569457711208234 7 0.9679947587869155 1.9571884896864054 8 0.8514679466260715 1.9675233620501842 9 0.7853622485279057 2.0416163638285503 >10 9.602116593700332 55.826348694313154 >50 0.1294902240791005 2.3092770211894 >100 0.021913729386871143 1.1145892163605544 >500 0.0015937257735906245 0.29875824529395933 >1k 0.0 0.0 >5k 3.9843144339765614E-4 0.7060407684431588 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6135 0.6857690897547104 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1177980273100415E-4 0.0 0.0 0.0325279225947222 0.0 2 1.1177980273100415E-4 0.0 0.0 0.08864138356568628 0.0 3 1.1177980273100415E-4 0.0 0.0 0.1561563844152128 0.0 4 1.1177980273100415E-4 0.0 0.0 0.3266205835799941 0.0 5 1.1177980273100415E-4 0.0 0.0 0.5343074570541998 0.0 6 1.1177980273100415E-4 0.0 0.0 1.2164995931215181 0.0 7 1.1177980273100415E-4 0.0 0.0 1.5260178668836686 0.0 8 1.1177980273100415E-4 0.0 0.0 2.321107603709301 0.0 9 1.1177980273100415E-4 0.0 0.0 2.7875647205057814 0.0 10 1.1177980273100415E-4 0.0 0.0 3.377538519320021 0.0 11 1.1177980273100415E-4 0.0 0.0 3.78151072638987 0.0 12 1.1177980273100415E-4 0.0 0.0 4.118191492215654 0.0 13 1.1177980273100415E-4 0.0 0.0 4.3144768258112975 0.0 14 1.1177980273100415E-4 0.0 0.0 4.423462133474027 0.0 15 1.1177980273100415E-4 0.0 0.0 4.4986899407119925 0.0 16 1.1177980273100415E-4 0.0 0.0 4.61304067890581 0.0 17 1.1177980273100415E-4 0.0 0.0 4.727950316113282 0.0 18 1.1177980273100415E-4 0.0 0.0 4.893496203957899 0.0 19 1.1177980273100415E-4 0.0 0.0 4.9870558988437494 0.0 20 1.1177980273100415E-4 0.0 0.0 5.076591520831284 0.0 21 1.1177980273100415E-4 0.0 0.0 5.189489121589598 0.0 22 1.1177980273100415E-4 0.0 0.0 5.320047931179411 0.0 23 1.1177980273100415E-4 0.0 0.0 5.454966153075733 0.0 24 1.1177980273100415E-4 0.0 0.0 5.572223166140557 0.0 25 1.1177980273100415E-4 0.0 0.0 5.675507703864004 0.0 26 1.1177980273100415E-4 0.0 0.0 5.779239360798376 0.0 27 1.1177980273100415E-4 0.0 0.0 5.879282284242625 0.0 28 1.1177980273100415E-4 0.0 0.0 5.981784363346955 0.0 29 1.1177980273100415E-4 0.0 0.0 6.099935614833627 0.0 30 1.1177980273100415E-4 0.0 0.0 6.263134126820893 0.0 31 1.1177980273100415E-4 0.0 0.0 6.389109964498735 0.0 32 1.1177980273100415E-4 0.0 0.0 6.530064295742531 0.0 33 1.1177980273100415E-4 0.0 0.0 6.660958444740537 0.0 34 1.1177980273100415E-4 0.0 0.0 6.803254133617105 0.0 35 1.1177980273100415E-4 0.0 0.0 6.964552388957944 0.0 36 1.1177980273100415E-4 0.0 0.0 7.097458574405108 0.0 37 1.1177980273100415E-4 0.0 0.0 7.234388832750588 0.0 38 1.1177980273100415E-4 0.0 0.0 7.4074239673781825 0.0 39 1.1177980273100415E-4 0.0 0.0 7.70665849928908 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACCG 40 6.8121153E-9 45.0 1 TATCGTC 20 7.032448E-4 45.0 13 TGTAACG 20 7.032448E-4 45.0 1 TATAGCG 80 0.0 42.1875 1 CGTAAGG 120 0.0 41.250004 2 CGGTCTA 85 0.0 39.705883 31 CGTTTTT 4045 0.0 39.54883 1 CGAATAT 75 0.0 39.0 14 TAACGGG 215 0.0 38.720932 3 GCGTTAG 70 0.0 38.57143 1 CATACGA 140 0.0 38.57143 18 GCGATAT 140 0.0 38.57143 9 GCGATAC 65 9.094947E-12 38.076927 9 AGGGCGA 1040 0.0 38.076927 6 GCGGGAT 290 0.0 38.01724 5 AGTACGG 125 0.0 37.8 2 GGGCGAT 2195 0.0 37.72209 7 ACACGAC 460 0.0 37.66304 26 ATTACGA 30 1.1397194E-4 37.500004 40 TATTCGG 60 1.546141E-10 37.500004 2 >>END_MODULE