##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547084_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1322000 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42759682299546 31.0 31.0 33.0 30.0 34.0 2 31.799399394856277 31.0 31.0 34.0 30.0 34.0 3 31.898812405446293 31.0 31.0 34.0 30.0 34.0 4 35.6832602118003 37.0 35.0 37.0 33.0 37.0 5 35.632560514372166 37.0 35.0 37.0 33.0 37.0 6 35.679714069591526 37.0 35.0 37.0 33.0 37.0 7 36.04207488653555 37.0 35.0 37.0 35.0 37.0 8 34.74052042360061 37.0 35.0 37.0 33.0 37.0 9 37.043247352496216 39.0 37.0 39.0 34.0 39.0 10 36.70087291981846 39.0 37.0 39.0 32.0 39.0 11 36.79554765506808 39.0 37.0 39.0 32.0 39.0 12 36.66778063540091 39.0 35.0 39.0 32.0 39.0 13 36.63150226928896 39.0 35.0 39.0 32.0 39.0 14 37.76811497730711 40.0 36.0 41.0 33.0 41.0 15 37.89729273827534 40.0 36.0 41.0 33.0 41.0 16 37.906920574886534 40.0 36.0 41.0 33.0 41.0 17 37.80246293494705 40.0 36.0 41.0 33.0 41.0 18 37.709773827534036 39.0 36.0 41.0 33.0 41.0 19 37.63989258698941 39.0 36.0 41.0 33.0 41.0 20 37.49379576399395 39.0 35.0 41.0 33.0 41.0 21 37.400605143721634 39.0 35.0 41.0 32.0 41.0 22 37.30218078668684 39.0 35.0 41.0 32.0 41.0 23 37.21473222390318 39.0 35.0 41.0 32.0 41.0 24 37.06824810892587 39.0 35.0 41.0 32.0 41.0 25 36.98582980332829 39.0 35.0 41.0 32.0 41.0 26 36.88313313161876 39.0 35.0 41.0 31.0 41.0 27 36.795505295007565 39.0 35.0 41.0 31.0 41.0 28 36.797528744326776 39.0 35.0 41.0 31.0 41.0 29 36.75511119515885 39.0 35.0 41.0 31.0 41.0 30 36.66969894099849 39.0 35.0 41.0 31.0 41.0 31 36.57439561270802 39.0 35.0 41.0 31.0 41.0 32 36.45475794251135 39.0 35.0 41.0 30.0 41.0 33 36.28746898638427 39.0 35.0 41.0 30.0 41.0 34 36.0901134644478 39.0 35.0 41.0 29.0 41.0 35 35.950153555219366 39.0 35.0 41.0 29.0 41.0 36 35.81111422087746 39.0 35.0 41.0 28.0 41.0 37 35.77340393343419 39.0 35.0 41.0 27.0 41.0 38 35.66813842662632 39.0 35.0 41.0 27.0 41.0 39 35.58921104387292 38.0 35.0 41.0 27.0 41.0 40 35.46399394856278 38.0 35.0 41.0 26.0 41.0 41 35.36495990922844 38.0 35.0 41.0 26.0 41.0 42 35.302519667170955 38.0 35.0 41.0 26.0 41.0 43 35.205595310136154 38.0 34.0 40.0 25.0 41.0 44 35.099054462934944 38.0 34.0 40.0 25.0 41.0 45 34.959804841149776 38.0 34.0 40.0 24.0 41.0 46 34.89136838124055 38.0 34.0 40.0 24.0 41.0 47 34.81265128593041 38.0 34.0 40.0 24.0 41.0 48 34.72502723146747 37.0 34.0 40.0 23.0 41.0 49 34.65556732223903 37.0 34.0 40.0 24.0 41.0 50 34.54527382753404 37.0 34.0 40.0 24.0 41.0 51 34.18228139183056 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 3.0 12 2.0 13 6.0 14 14.0 15 37.0 16 93.0 17 228.0 18 571.0 19 1129.0 20 1843.0 21 3058.0 22 4599.0 23 6975.0 24 10257.0 25 15562.0 26 20886.0 27 23319.0 28 24523.0 29 26269.0 30 30047.0 31 35280.0 32 42929.0 33 55211.0 34 86347.0 35 125366.0 36 102245.0 37 134885.0 38 203648.0 39 366458.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.898789712556734 23.109001512859304 27.140242057488656 15.851966717095308 2 33.53676248108926 25.267397881996974 27.96444780635401 13.231391830559758 3 28.556354009077157 25.329349470499245 32.54795763993948 13.566338880484116 4 25.067549167927382 27.887594553706506 32.27617246596067 14.768683812405447 5 22.57390317700454 32.08895612708018 30.839258698940995 14.497881996974282 6 20.762632375189106 40.812556732223904 28.12239031770045 10.302420574886535 7 86.73169440242057 3.362934947049925 8.388880484114978 1.5164901664145236 8 84.61157337367625 5.4366868381240545 7.747806354009078 2.20393343419062 9 81.58706505295008 4.021406959152799 11.513010590015128 2.878517397881997 10 34.552269288956126 21.196066565809378 30.78910741301059 13.462556732223904 11 32.44024205748865 26.03736762481089 24.875945537065054 16.6464447806354 12 27.915733736762483 24.54947049924357 28.529954614220877 19.00484114977307 13 22.907942511346445 28.26232980332829 30.284341906202723 18.54538577912254 14 20.805824508320725 29.6732980332829 31.10741301059001 18.413464447806355 15 20.84659606656581 24.809757942511347 36.14175491679274 18.201891074130106 16 22.19614220877458 23.16800302571861 35.49334341906203 19.142511346444778 17 22.422617246596065 23.17125567322239 30.862178517397883 23.54394856278366 18 23.731391830559758 23.543721633888048 32.419288956127076 20.305597579425115 19 26.120726172465965 25.89538577912254 28.129576399394857 19.854311649016644 20 27.25726172465961 25.2035552193646 27.99039334341906 19.548789712556733 21 24.938956127080182 27.08464447806354 29.310136157337368 18.66626323751891 22 24.3124810892587 23.25605143721634 29.87745839636914 22.554009077155822 23 22.40968229954614 27.26512859304085 28.906278366111955 21.418910741301058 24 21.526323751891073 25.561951588502268 33.327534039334346 19.584190620272317 25 22.07375189107413 26.150453857791224 31.05158850226929 20.724205748865355 26 20.802571860816943 28.798789712556733 29.155219364599095 21.243419062027233 27 21.46089258698941 27.327004538577913 29.64387291981846 21.56822995461422 28 20.154009077155823 27.35030257186082 32.19296520423601 20.302723146747354 29 21.167246596066565 25.47102874432678 31.679576399394854 21.6821482602118 30 22.61195158850227 26.34606656580938 30.71157337367625 20.330408472012103 31 24.32586989409985 26.23350983358548 28.072390317700453 21.368229954614222 32 25.0820726172466 26.160136157337366 27.9357034795764 20.82208774583964 33 23.57745839636914 26.294931921331315 27.429500756429654 22.698108925869896 34 21.12057488653555 27.893797276853256 29.151815431164902 21.83381240544629 35 21.380408472012103 26.92571860816944 29.207866868381238 22.486006051437215 36 23.67216338880484 28.236081694402422 27.27609682299546 20.815658093797275 37 21.5124810892587 29.33275340393343 27.362102874432676 21.79266263237519 38 21.934568835098336 29.168683812405444 27.87344931921331 21.023298033282906 39 21.32201210287443 28.608472012102876 27.23350983358548 22.836006051437217 40 23.32715582450832 26.257866868381242 29.005673222390314 21.40930408472012 41 20.349773071104387 26.604765506807865 28.914750378214826 24.13071104387292 42 22.702420574886535 27.536384266263237 26.896066565809377 22.865128593040847 43 21.844780635400905 26.500151285930407 28.657715582450834 22.99735249621785 44 22.017927382753406 27.912027231467473 28.283585476550684 21.78645990922844 45 20.84538577912254 28.456278366111952 27.71913767019667 22.979198184568837 46 22.62125567322239 27.263842662632378 28.083509833585474 22.03139183055976 47 22.10574886535552 27.034720121028744 28.817322239031768 22.042208774583962 48 22.42798789712557 26.540468986384262 29.088653555219363 21.9428895612708 49 22.048335854765508 26.182904689863847 28.88434190620272 22.884417549167928 50 21.39659606656581 27.598108925869898 29.105068078668683 21.900226928895613 51 20.69357034795764 28.195083207261725 27.955748865355524 23.155597579425113 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1341.0 1 1626.5 2 1912.0 3 9878.0 4 17844.0 5 12595.0 6 7346.0 7 7324.0 8 7302.0 9 7656.0 10 8010.0 11 8112.0 12 8214.0 13 8175.0 14 8136.0 15 7956.0 16 7776.0 17 7502.0 18 7228.0 19 7212.5 20 7197.0 21 7041.5 22 6886.0 23 7281.5 24 7677.0 25 8576.5 26 10872.0 27 12268.0 28 14160.0 29 16052.0 30 18444.5 31 20837.0 32 24193.5 33 27550.0 34 31147.0 35 34744.0 36 39522.0 37 44300.0 38 49162.5 39 54025.0 40 61809.0 41 69593.0 42 76898.0 43 84203.0 44 87886.5 45 91570.0 46 98548.5 47 105527.0 48 107863.5 49 110200.0 50 107659.5 51 105119.0 52 99361.5 53 93604.0 54 84660.0 55 75716.0 56 68764.5 57 61813.0 58 56763.5 59 51714.0 60 46595.5 61 41477.0 62 37285.0 63 33093.0 64 29458.0 65 25823.0 66 21410.5 67 16998.0 68 14859.5 69 12721.0 70 10978.5 71 9236.0 72 7847.5 73 6459.0 74 5567.0 75 3873.0 76 3071.0 77 2347.5 78 1624.0 79 1327.0 80 1030.0 81 709.5 82 389.0 83 258.5 84 128.0 85 89.0 86 50.0 87 40.0 88 30.0 89 21.5 90 13.0 91 7.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1322000.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.47474481077904 #Duplication Level Percentage of deduplicated Percentage of total 1 74.93420474715116 21.337323577737966 2 6.375215108928255 3.630652466811099 3 2.8729065614593625 2.4541584360830413 4 1.8087560626480375 2.060154692354094 5 1.3972491915622987 1.9893157083401891 6 1.1635674695521836 1.9879372059373406 7 0.9289898191054212 1.8516923621587058 8 0.8021163511757375 1.8272046726625881 9 0.7107622539121762 1.8214896421155022 >10 8.67014194472519 53.30501692776352 >50 0.30990340327271637 5.3684045544846715 >100 0.024277611455836533 1.241153186820275 >500 0.00163669290140338 0.317143028430814 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 2.7278215023389667E-4 0.8083535383001423 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10407 0.787216338880484 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03207261724659607 0.0 2 0.0 0.0 0.0 0.10098335854765507 0.0 3 0.0 0.0 0.0 0.1848714069591528 0.0 4 0.0 0.0 0.0 0.3464447806354009 0.0 5 0.0 0.0 0.0 0.5710287443267776 0.0 6 0.0 0.0 0.0 1.2376701966717096 0.0 7 0.0 0.0 0.0 1.5444780635400908 0.0 8 0.0 0.0 0.0 2.339939485627837 0.0 9 0.0 0.0 0.0 2.745385779122542 0.0 10 0.0 0.0 0.0 3.2910741301059003 0.0 11 0.0 0.0 0.0 3.6411497730711044 0.0 12 0.0 0.0 0.0 3.9354765506807867 0.0 13 0.0 0.0 0.0 4.105219364599092 0.0 14 0.0 0.0 0.0 4.200075642965205 0.0 15 0.0 0.0 0.0 4.275642965204236 0.0 16 0.0 0.0 0.0 4.406656580937973 0.0 17 0.0 0.0 0.0 4.543721633888048 0.0 18 0.0 0.0 0.0 4.728366111951589 0.0 19 0.0 0.0 0.0 4.828971255673222 0.0 20 0.0 0.0 0.0 4.939712556732224 0.0 21 0.0 0.0 0.0 5.070272314674735 0.0 22 0.0 0.0 0.0 5.216717095310136 0.0 23 0.0 0.0 0.0 5.379425113464448 0.0 24 0.0 0.0 0.0 5.521482602118003 0.0 25 0.0 0.0 0.0 5.646822995461422 0.0 26 0.0 0.0 0.0 5.764599092284418 0.0 27 0.0 0.0 0.0 5.887443267776097 0.0 28 0.0 0.0 0.0 6.009909228441755 0.0 29 0.0 0.0 0.0 6.1470499243570345 0.0 30 0.0 0.0 0.0 6.331164901664145 0.0 31 0.0 0.0 0.0 6.4885779122541605 0.0 32 0.0 0.0 0.0 6.658169440242058 0.0 33 0.0 0.0 0.0 6.815431164901664 0.0 34 0.0 0.0 0.0 6.9708774583963695 0.0 35 0.0 0.0 0.0 7.143948562783661 0.0 36 0.0 0.0 0.0 7.3089258698941 0.0 37 0.0 0.0 0.0 7.4745839636913765 0.0 38 0.0 0.0 0.0 7.658774583963692 0.0 39 7.5642965204236E-5 0.0 0.0 7.899924357034796 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7140 0.0 42.195377 1 GCGATAC 125 0.0 41.4 9 TGTAGCG 90 0.0 40.0 1 GGCGATA 605 0.0 38.67769 8 TTTAGCG 105 0.0 38.57143 1 TAGGGTG 1400 0.0 38.410713 5 TATGGGT 1165 0.0 38.04721 4 AGGGTAC 1035 0.0 38.04348 6 GCGATAA 95 0.0 37.894737 9 TATACGG 95 0.0 37.894737 2 ATAGGGT 1200 0.0 37.875 4 TCGTTGA 125 0.0 37.800003 24 CGACGGT 60 1.5643309E-10 37.499996 28 ATTCGCG 30 1.14001465E-4 37.499996 1 ATAACGC 60 1.5643309E-10 37.499996 11 CGATCAA 30 1.14001465E-4 37.499996 10 TATAACG 30 1.14001465E-4 37.499996 1 GTACGCA 30 1.14001465E-4 37.499996 9 ACGGGTA 415 0.0 37.409637 5 GGGCGAT 2900 0.0 37.08621 7 >>END_MODULE