##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547083_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 678310 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.680800813787208 31.0 31.0 33.0 30.0 34.0 2 32.06052542347894 33.0 31.0 34.0 30.0 34.0 3 32.12979021391399 33.0 31.0 34.0 30.0 34.0 4 35.80208016983385 37.0 35.0 37.0 35.0 37.0 5 35.74667040143887 37.0 35.0 37.0 33.0 37.0 6 35.80250622871549 37.0 35.0 37.0 35.0 37.0 7 36.12652474532293 37.0 35.0 37.0 35.0 37.0 8 36.072975483186156 37.0 35.0 37.0 35.0 37.0 9 37.8639235747667 39.0 38.0 39.0 35.0 39.0 10 37.40108504960859 39.0 37.0 39.0 35.0 39.0 11 37.08935884772449 39.0 37.0 39.0 33.0 39.0 12 36.25827129188719 38.0 35.0 39.0 33.0 39.0 13 35.86067579720187 38.0 35.0 39.0 31.0 39.0 14 36.88544175966741 39.0 35.0 41.0 32.0 41.0 15 37.14068936032198 39.0 35.0 41.0 32.0 41.0 16 37.30239123704501 39.0 35.0 41.0 33.0 41.0 17 37.2799427990152 39.0 35.0 41.0 33.0 41.0 18 37.21857410328611 39.0 35.0 41.0 33.0 41.0 19 37.15222538367413 38.0 35.0 41.0 32.0 41.0 20 36.96037357550382 38.0 35.0 41.0 32.0 41.0 21 36.86507349147145 38.0 35.0 41.0 32.0 41.0 22 36.77336026300659 38.0 35.0 41.0 32.0 41.0 23 36.75116097359614 38.0 35.0 41.0 32.0 41.0 24 36.663712756704165 38.0 35.0 41.0 32.0 41.0 25 36.578786985301704 38.0 35.0 41.0 32.0 41.0 26 36.42824077486695 38.0 35.0 40.0 31.0 41.0 27 36.33201043770547 38.0 35.0 40.0 31.0 41.0 28 36.376810013120846 38.0 35.0 40.0 31.0 41.0 29 36.392378116200554 37.0 35.0 40.0 31.0 41.0 30 36.3872934204125 37.0 35.0 40.0 31.0 41.0 31 36.22425439695714 37.0 35.0 40.0 31.0 41.0 32 36.082416594182604 38.0 35.0 40.0 31.0 41.0 33 35.95963497515885 38.0 35.0 40.0 30.0 41.0 34 35.822749185475665 37.0 35.0 40.0 30.0 41.0 35 35.71693620910793 37.0 35.0 40.0 30.0 41.0 36 35.59666819006059 37.0 35.0 40.0 30.0 41.0 37 35.508801285547904 37.0 35.0 40.0 29.0 41.0 38 35.47160295440138 37.0 35.0 40.0 29.0 41.0 39 35.428638822957055 37.0 35.0 40.0 29.0 41.0 40 35.29244150904454 37.0 35.0 40.0 29.0 41.0 41 35.29065913815217 36.0 35.0 40.0 29.0 41.0 42 35.21320635107841 36.0 34.0 40.0 29.0 41.0 43 35.087321431204025 36.0 34.0 40.0 28.0 41.0 44 34.93063496041633 36.0 34.0 40.0 27.0 41.0 45 34.84097683949816 36.0 34.0 40.0 27.0 41.0 46 34.79274815349914 35.0 34.0 40.0 27.0 41.0 47 34.74588167651959 35.0 34.0 40.0 27.0 41.0 48 34.68174138668161 35.0 34.0 40.0 27.0 41.0 49 34.6226946381448 36.0 34.0 40.0 27.0 41.0 50 34.49677728472233 35.0 34.0 40.0 26.0 41.0 51 34.14921201220681 35.0 34.0 39.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 0.0 12 1.0 13 2.0 14 6.0 15 8.0 16 34.0 17 101.0 18 244.0 19 415.0 20 818.0 21 1193.0 22 1954.0 23 2992.0 24 4517.0 25 6626.0 26 9294.0 27 10910.0 28 11520.0 29 12967.0 30 15010.0 31 18451.0 32 23163.0 33 31063.0 34 59828.0 35 113587.0 36 43368.0 37 55433.0 38 82866.0 39 171775.0 40 160.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.91209034217393 23.632409960047767 29.303415842313985 14.152083855464316 2 31.784877121080328 25.062139729622153 29.991301912105083 13.161681237192436 3 29.500965635181554 24.199407350621396 32.42249119134319 13.877135822853855 4 26.58813816691483 27.168108976721555 32.016334714216214 14.227418142147396 5 24.426147336763428 31.88453656882546 29.386416240362077 14.302899854049034 6 21.852692721616958 40.21686249649865 26.751043033421297 11.179401748463091 7 86.36021877902435 4.417006973212838 7.248750571272722 1.9740236764901005 8 87.38084356710058 3.421002196635756 6.815173003493978 2.3829812327696773 9 83.16978962421312 5.294187023632262 8.468546829620676 3.0674765225339446 10 52.7788179445976 21.36235644469343 14.4405950081821 11.418230602526869 11 45.4687384824048 20.766905986938124 18.931314590673882 14.833040939983194 12 40.735356990166736 19.955625009214074 23.670150815998582 15.6388671846206 13 22.85739558608896 36.44587283100647 24.107266589022718 16.589464993881855 14 16.45707714761687 38.43537615544515 28.399551827335586 16.707994869602395 15 16.044728811310463 23.492503427636333 44.94331500346449 15.519452757588715 16 17.55642700240303 19.030679187981896 43.47584437793929 19.93704943167578 17 17.859533251758045 20.389202576992822 28.587813831434005 33.16345033981513 18 22.277719626719346 24.28565110347776 31.93584054488361 21.500788724919285 19 28.950627294304965 26.218543143990207 24.466246996211172 20.364582565493652 20 31.9701906208076 23.909274520499476 24.73854137488759 19.381993483805342 21 23.524347274844835 28.40191063083251 27.09085816219722 20.98288393212543 22 23.310138432280226 24.816381890286152 25.457091890138727 26.416387787294894 23 21.25783196473589 29.247836534917663 24.952750217452195 24.54158128289425 24 21.751264171249137 23.509752178207606 35.257625569429905 19.481358081113356 25 19.229408382597928 25.550117203048757 32.51772788253159 22.70274653182173 26 18.22057761200631 34.18245345048724 26.684406834633133 20.912562102873316 27 20.599430938656365 31.210655894797362 27.932803585381315 20.257109581164954 28 17.815010835753565 27.78906399728738 36.42434874909702 17.97157641786204 29 18.01123380165411 24.84439268181215 35.04695493211069 22.09741858442305 30 21.133257655054475 27.89358847724492 29.95341363093571 21.0197402367649 31 28.11811708510858 25.857498783741946 24.761539708982617 21.262844422166857 32 29.583966033229643 26.05003611917855 25.708451887779926 18.657545959811888 33 27.63883769957689 26.7006236086745 24.976190827202903 20.68434786454571 34 20.977429199038788 26.651531010894725 28.231781928616712 24.139257861449778 35 21.32166708437145 25.18641918886645 30.161725464758 23.330188262004096 36 28.701036399286462 24.93166841119842 25.829340566997388 20.53795462251773 37 21.762026212203857 30.173224631805518 27.98425498665802 20.080494169332606 38 21.29129748934853 30.852707464138817 25.102239389069897 22.753755657442763 39 22.097860860078725 28.952691247364776 26.651383585676165 22.298064306880335 40 24.059205967772847 24.803555896271618 26.103846323952173 25.033391812003362 41 17.941206822839113 24.366145272810368 28.188144063923577 29.504503840426942 42 22.45743096814141 25.43822146216332 24.240686411817606 27.86366115787767 43 23.006884757706654 25.792779112795035 25.374238917309196 25.82609721218912 44 20.785039288820744 28.768409724167416 27.54537011101119 22.901180876000648 45 19.042620630685082 33.317509693208116 24.001710132535273 23.638159543571525 46 22.353053913402427 30.454511948813963 25.940056906134362 21.25237723164925 47 22.418658135660685 25.662897495245534 27.467382170394067 24.45106219869971 48 23.328124308944286 22.26194512833365 30.943963674426143 23.46596688829591 49 21.322699060901357 22.897642670755257 30.90799192109802 24.871666347245363 50 19.15097816632513 29.653698161607522 27.50187967153661 23.693444000530732 51 18.87691468502602 31.121316212351285 24.679129011808758 25.322640090813938 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 544.0 1 740.5 2 937.0 3 3803.0 4 6669.0 5 4686.0 6 2703.0 7 2763.5 8 2824.0 9 3013.5 10 3203.0 11 3131.0 12 3059.0 13 3013.5 14 2968.0 15 2835.5 16 2703.0 17 2519.0 18 2335.0 19 2290.0 20 2245.0 21 2268.0 22 2291.0 23 2323.5 24 2356.0 25 2788.5 26 3681.0 27 4141.0 28 5383.0 29 6625.0 30 7894.0 31 9163.0 32 10329.5 33 11496.0 34 12844.0 35 14192.0 36 14997.0 37 15802.0 38 19751.0 39 23700.0 40 32536.5 41 41373.0 42 49240.0 43 57107.0 44 59976.0 45 62845.0 46 60548.5 47 58252.0 48 57278.0 49 56304.0 50 52864.0 51 49424.0 52 44898.0 53 40372.0 54 37334.5 55 34297.0 56 32533.5 57 30770.0 58 30195.0 59 29620.0 60 27878.5 61 26137.0 62 23789.0 63 21441.0 64 18128.0 65 14815.0 66 12898.5 67 10982.0 68 9100.5 69 7219.0 70 6406.0 71 5593.0 72 4779.5 73 3966.0 74 2960.5 75 1618.5 76 1282.0 77 1034.5 78 787.0 79 587.0 80 387.0 81 258.0 82 129.0 83 92.0 84 55.0 85 29.5 86 4.0 87 6.0 88 8.0 89 6.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 1.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 678310.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.018640537805616 #Duplication Level Percentage of deduplicated Percentage of total 1 78.03479857830983 21.083941722274183 2 6.69216823750541 3.616265760553577 3 2.28721001636569 1.8539191579995926 4 1.336298693957188 1.4441989625267353 5 0.8933703334153127 1.2068825952843945 6 0.6775723882167755 1.098425087734292 7 0.5640548906027032 1.0667997432949998 8 0.5149663341126811 1.1130952216369632 9 0.4270659552414539 1.0384867377543083 >10 7.9466880235576065 54.05109647865272 >50 0.5741596518064501 9.475407869066537 >100 0.04944915661490928 2.0169886214260973 >500 0.001648305220496976 0.31797965901926106 >1k 5.494350734989921E-4 0.6165123827763731 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4153 0.6122569326709026 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 914 0.13474664976190828 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 684 0.10083884949359438 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08653860329347939 0.0 2 0.0 0.0 0.0 0.2806976161342159 0.0 3 0.0 0.0 0.0 0.41367516327342957 0.0 4 0.0 0.0 0.0 0.6241983753740915 0.0 5 0.0 0.0 0.0 1.1022983591573174 0.0 6 0.0 0.0 0.0 1.6529315504710236 0.0 7 0.0 0.0 0.0 1.9853754183190577 0.0 8 0.0 0.0 0.0 2.7195530067373324 0.0 9 0.0 0.0 0.0 3.024428358715042 0.0 10 0.0 0.0 0.0 3.564299509074022 0.0 11 0.0 0.0 0.0 4.1085934159897395 0.0 12 0.0 0.0 0.0 4.520646901859032 0.0 13 0.0 0.0 0.0 4.724683404343147 0.0 14 0.0 0.0 0.0 4.8088632041397 0.0 15 0.0 0.0 0.0 4.927982780734473 0.0 16 0.0 0.0 0.0 5.171529241792101 0.0 17 0.0 0.0 0.0 5.467853931093453 0.0 18 0.0 0.0 0.0 5.840102607952116 1.4742521855788652E-4 19 0.0 0.0 0.0 6.043254559124884 1.4742521855788652E-4 20 0.0 0.0 0.0 6.2430157302708205 1.4742521855788652E-4 21 0.0 0.0 0.0 6.504253217555395 1.4742521855788652E-4 22 0.0 0.0 0.0 6.781854904099895 1.4742521855788652E-4 23 0.0 0.0 0.0 7.118279252848993 1.4742521855788652E-4 24 0.0 0.0 0.0 7.35563385472719 1.4742521855788652E-4 25 0.0 0.0 0.0 7.559817782429862 1.4742521855788652E-4 26 0.0 0.0 0.0 7.753092243959252 1.4742521855788652E-4 27 0.0 0.0 0.0 7.938848019342188 1.4742521855788652E-4 28 0.0 0.0 0.0 8.144211348793325 1.4742521855788652E-4 29 0.0 0.0 0.0 8.35385000958264 1.4742521855788652E-4 30 0.0 0.0 0.0 8.60771623593932 1.4742521855788652E-4 31 0.0 0.0 0.0 8.85892880836196 1.4742521855788652E-4 32 0.0 0.0 0.0 9.076823281390515 1.4742521855788652E-4 33 0.0 0.0 0.0 9.291179549173682 1.4742521855788652E-4 34 0.0 0.0 0.0 9.507747195235217 1.4742521855788652E-4 35 0.0 0.0 0.0 9.763382524214592 1.4742521855788652E-4 36 0.0 0.0 0.0 10.011499167047516 1.4742521855788652E-4 37 0.0 0.0 0.0 10.253129100263891 1.4742521855788652E-4 38 0.0 0.0 0.0 10.503899397030857 1.4742521855788652E-4 39 0.0 0.0 0.0 10.74567675546579 1.4742521855788652E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 35 1.2109376E-7 45.000004 1 TACGGGA 140 0.0 45.000004 4 TGATTCG 30 2.1641808E-6 45.000004 1 GCGATAC 35 1.2109376E-7 45.000004 9 GCGTATG 30 2.1641808E-6 45.000004 1 GCATATT 35 1.2109376E-7 45.000004 9 CAAACGA 20 7.03124E-4 45.0 44 TTAATCG 20 7.03124E-4 45.0 20 TTTACGG 40 6.8084773E-9 45.0 2 GATCCAA 20 7.03124E-4 45.0 33 TCTAGCG 25 3.88911E-5 45.0 1 ATCGTAG 20 7.03124E-4 45.0 1 AAACGAC 25 3.88911E-5 45.0 45 GTAGCAT 55 1.8189894E-12 45.0 29 CGCTATT 25 3.88911E-5 45.0 40 ACTACGG 45 3.8380676E-10 45.0 2 GCGATAA 40 6.8084773E-9 45.0 9 GGTTACG 20 7.03124E-4 45.0 1 CGATACT 20 7.03124E-4 45.0 10 TACGTAG 25 3.88911E-5 45.0 1 >>END_MODULE