SRR1547082_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547082_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	961806
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17972	1.8685680896147454	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCGATC	20	7.0327113E-4	45.000004	30
TATAGCG	25	3.8903298E-5	45.0	1
CGTTTTT	11080	0.0	43.740974	1
AACGAGC	140	0.0	40.17857	15
ACGGGCT	275	0.0	40.090908	5
TCTAGCG	40	3.457444E-7	39.375004	1
AATACGG	120	0.0	39.375004	2
GCGATAA	75	0.0	39.0	9
ACGGGAT	385	0.0	38.57143	5
ATAACGG	105	0.0	38.57143	2
GTTTTTT	12790	0.0	38.561375	2
GACCGAT	275	0.0	38.454544	9
TCATCGA	65	9.094947E-12	38.07692	16
TTCATCG	65	9.094947E-12	38.07692	15
ACGACCA	130	0.0	38.07692	28
TAGGGAT	1065	0.0	37.816902	5
CGATACG	30	1.1397833E-4	37.500004	10
TCGATCA	330	0.0	37.5	17
GGGCGAT	1095	0.0	37.19178	7
CCTCGAT	345	0.0	37.173912	15