##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547081_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 829489 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.634581049296614 31.0 31.0 33.0 30.0 34.0 2 32.02916856040285 33.0 31.0 34.0 30.0 34.0 3 32.10627868482885 33.0 31.0 34.0 30.0 34.0 4 35.78886519290792 37.0 35.0 37.0 35.0 37.0 5 35.737051365358674 37.0 35.0 37.0 33.0 37.0 6 35.79289417942854 37.0 35.0 37.0 35.0 37.0 7 36.09614111820651 37.0 35.0 37.0 35.0 37.0 8 36.046574457286354 37.0 35.0 37.0 35.0 37.0 9 37.8264835338383 39.0 38.0 39.0 35.0 39.0 10 37.385923140632364 39.0 37.0 39.0 35.0 39.0 11 37.09216758751472 39.0 37.0 39.0 33.0 39.0 12 36.40337725997572 38.0 35.0 39.0 33.0 39.0 13 36.1368481076904 39.0 35.0 39.0 32.0 39.0 14 37.16249522296257 39.0 35.0 41.0 32.0 41.0 15 37.368321942786466 39.0 35.0 41.0 32.0 41.0 16 37.49972694032109 39.0 35.0 41.0 33.0 41.0 17 37.46798812280814 39.0 35.0 41.0 33.0 41.0 18 37.35391066065976 39.0 35.0 41.0 32.0 41.0 19 37.28775306242759 39.0 35.0 41.0 32.0 41.0 20 37.10655234728851 39.0 35.0 41.0 32.0 41.0 21 37.03148444403723 39.0 35.0 41.0 32.0 41.0 22 36.95617904517118 38.0 35.0 41.0 32.0 41.0 23 36.92442937760477 38.0 35.0 41.0 32.0 41.0 24 36.845883429436675 38.0 35.0 41.0 32.0 41.0 25 36.73941547145291 38.0 35.0 41.0 32.0 41.0 26 36.60911356268739 38.0 35.0 41.0 31.0 41.0 27 36.51005257453685 38.0 35.0 41.0 31.0 41.0 28 36.52438790628929 38.0 35.0 41.0 31.0 41.0 29 36.53328133344746 38.0 35.0 41.0 31.0 41.0 30 36.48593772792647 38.0 35.0 41.0 31.0 41.0 31 36.34392861147044 38.0 35.0 41.0 31.0 41.0 32 36.202933372232785 38.0 35.0 41.0 30.0 41.0 33 36.055473912252 38.0 35.0 41.0 30.0 41.0 34 35.88809737079093 38.0 35.0 41.0 30.0 41.0 35 35.762328373251485 38.0 35.0 41.0 29.0 41.0 36 35.66860681696804 38.0 35.0 41.0 29.0 41.0 37 35.59189573339731 38.0 35.0 41.0 29.0 41.0 38 35.522015361264586 38.0 35.0 40.0 29.0 41.0 39 35.432759204763414 38.0 35.0 40.0 28.0 41.0 40 35.295414405736544 37.0 35.0 40.0 27.0 41.0 41 35.249014754867154 37.0 34.0 40.0 27.0 41.0 42 35.15694843451812 37.0 34.0 40.0 27.0 41.0 43 35.035055317189254 37.0 34.0 40.0 27.0 41.0 44 34.89551398511614 37.0 34.0 40.0 26.0 41.0 45 34.80409384572912 36.0 34.0 40.0 26.0 41.0 46 34.76376419699357 36.0 34.0 40.0 26.0 41.0 47 34.70882555404592 36.0 34.0 40.0 26.0 41.0 48 34.632018025555496 36.0 34.0 40.0 26.0 41.0 49 34.555515504123626 36.0 34.0 40.0 26.0 41.0 50 34.43488340411989 35.0 34.0 40.0 26.0 41.0 51 34.087092173615325 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 6.0 13 5.0 14 5.0 15 33.0 16 71.0 17 132.0 18 341.0 19 645.0 20 1142.0 21 1849.0 22 2818.0 23 4006.0 24 5801.0 25 8738.0 26 11646.0 27 13886.0 28 15072.0 29 16328.0 30 18533.0 31 22119.0 32 27695.0 33 36694.0 34 67684.0 35 111533.0 36 55931.0 37 75120.0 38 112767.0 39 218715.0 40 172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.385962924161745 23.552211060062277 29.121181836046045 14.940644179729931 2 33.006224314005365 24.144262310892607 29.356989664721294 13.492523710380727 3 29.603044766115044 24.10327322001859 32.23406217562861 14.059619838237758 4 27.05267942070359 26.460869282172517 31.685531694814518 14.800919602309373 5 24.26313067442727 30.98365379167174 30.315049385826697 14.438166148074297 6 22.26768528576027 39.630423067695894 27.073053409990973 11.028838236552865 7 86.7604030915419 3.7564090663046765 7.630601490797346 1.852586351356076 8 87.75547355058355 2.862123548353263 7.305099886797775 2.077303014265409 9 83.54408557557726 4.31132902304913 9.046533468195479 3.0980519331781373 10 49.31710969042386 24.210447637039188 14.399588180192865 12.072854492344081 11 40.814163900907666 21.60498813124707 22.193061029139628 15.387786938705636 12 35.77551962714394 20.074648367850568 26.937789410106706 17.212042594898787 13 24.696891700794104 28.8522210662227 27.341049730617286 19.109837502365913 14 18.89030475389065 31.476125662908128 30.6157164230026 19.017853160198626 15 17.971184669115566 22.503131445986625 41.41935577204761 18.1063281128502 16 22.031636344785767 20.37061371519092 37.681994577384394 19.915755362638926 17 22.45418564923706 20.492495982466313 28.28669216831085 28.766626199985772 18 24.654817604573417 22.38558920009789 31.733995266965564 21.225597928363126 19 28.431359547866215 23.77053824704125 26.54513803076352 21.252964174329016 20 29.920227995790178 23.963307530298774 26.188291827860283 19.92817264605076 21 26.470393217993248 25.173329604129773 28.5159899649061 19.84028721297088 22 24.307254225191656 22.21753392751441 29.091525023237196 24.38368682405674 23 23.03309627975778 25.083756384955073 27.837499954791443 24.0456473804957 24 23.032131830560743 22.557863937918405 33.56705152208166 20.842952709439185 25 21.841880965268977 23.75920596897608 31.45948891425926 22.93942415149568 26 20.838371575753264 28.37469815754037 27.497290500537076 23.289639766169294 27 21.335304024525943 27.021696490248814 29.816188038659945 21.826811446565294 28 19.624612261283755 25.66122034168024 33.79237096573915 20.92179643129686 29 20.69671809993864 23.769935466293106 33.19465357587623 22.338692857892028 30 22.673838953861956 24.821305647211716 30.510712016675328 21.994143382251 31 27.28028943120403 23.783076086602716 26.864973495730503 22.07166098646275 32 28.244618072090166 24.20164703811624 26.567199806145712 20.986535083647883 33 27.274623292171444 24.761389240845872 26.952858928810386 21.011128538172297 34 22.589570205270956 25.22999099445562 29.11804737615568 23.062391424117738 35 22.490231937976272 24.773806524257704 29.939637535880525 22.7963240018855 36 27.789398051089286 23.963186974149146 26.773712490460994 21.473702484300574 37 23.478310140339413 27.7109159976805 27.449188596834915 21.361585265145166 38 23.373185177862517 28.121891911767367 24.991772042787787 23.51315086758233 39 23.288313648523367 26.92488990209635 27.042311591835457 22.744484857544826 40 24.415151979110032 24.02768451420091 27.412539527347562 24.1446239793415 41 21.13144357550251 23.562699445080042 27.366004853590585 27.939852125826864 42 23.510619188440113 25.21528314420083 25.776713133025268 25.49738453433379 43 23.375957969303993 24.598758994995716 26.878958009087523 25.14632502661277 44 22.264912494318793 26.04965225578639 28.162037109593978 23.523398140300834 45 21.264417008543816 28.580608061107498 25.969241303983537 24.185733626365145 46 23.81707292079823 26.778655292595804 27.06799005170653 22.336281734899437 47 22.784991723820326 24.745596385244408 28.256312018604223 24.213099872331036 48 23.220199423982717 23.490847979900877 29.388575375924216 23.90037722019219 49 23.367277926530672 22.246226291126224 30.13976074426545 24.24673503807766 50 21.735188772846897 26.563583121656826 28.044735976004503 23.65649212949177 51 20.68888195021272 28.267282628220507 26.263398309079445 24.780437112487327 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 420.0 1 799.5 2 1179.0 3 5576.0 4 9973.0 5 6950.5 6 3928.0 7 3792.5 8 3657.0 9 3815.0 10 3973.0 11 3914.0 12 3855.0 13 3688.5 14 3522.0 15 3413.5 16 3305.0 17 3145.0 18 2985.0 19 2922.0 20 2859.0 21 2840.0 22 2821.0 23 3402.5 24 3984.0 25 4257.0 26 4979.0 27 5428.0 28 6253.5 29 7079.0 30 8632.5 31 10186.0 32 11534.5 33 12883.0 34 14118.5 35 15354.0 36 17204.0 37 19054.0 38 22697.5 39 26341.0 40 32447.5 41 38554.0 42 47326.5 43 56099.0 44 58665.0 45 61231.0 46 62185.5 47 63140.0 48 62921.5 49 62703.0 50 60457.5 51 58212.0 52 55916.0 53 53620.0 54 50027.5 55 46435.0 56 45988.5 57 45542.0 58 44208.0 59 42874.0 60 41547.5 61 40221.0 62 36914.5 63 33608.0 64 29840.5 65 26073.0 66 22271.5 67 18470.0 68 15367.5 69 12265.0 70 10879.5 71 9494.0 72 7782.0 73 6070.0 74 4996.0 75 2826.0 76 1730.0 77 1390.0 78 1050.0 79 802.5 80 555.0 81 367.0 82 179.0 83 126.0 84 73.0 85 45.0 86 17.0 87 14.0 88 11.0 89 15.5 90 20.0 91 11.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 829489.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.297521860295614 #Duplication Level Percentage of deduplicated Percentage of total 1 76.2972234462723 20.064279014582052 2 5.579833602588799 2.9347159228178197 3 2.123029998716305 1.674912834039162 4 1.344041145262591 1.4137980559471897 5 1.011188251681027 1.3295872576727956 6 0.838757201311382 1.3234341502179863 7 0.734922242714077 1.3528643620373646 8 0.68352137037195 1.4379934543468456 9 0.6192916815667848 1.465725288051158 >10 10.53750626103159 61.868739016391814 >50 0.2044392226117573 3.298398913814888 >100 0.02578512717194961 1.1273162218519337 >500 0.0 0.0 >1k 0.0 0.0 >5k 4.604486994991002E-4 0.7082355082289968 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5849 0.705132919182774 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04303854541772103 0.0 2 0.0 0.0 0.0 0.15419131537609299 0.0 3 0.0 0.0 0.0 0.23713394632116883 0.0 4 0.0 0.0 0.0 0.36600847027507294 0.0 5 0.0 0.0 0.0 0.674149988728 0.0 6 0.0 0.0 0.0 1.0331662023245636 0.0 7 0.0 0.0 0.0 1.2795829721672016 0.0 8 0.0 0.0 0.0 1.8101505866865022 0.0 9 0.0 0.0 0.0 2.0711546506343064 0.0 10 0.0 0.0 0.0 2.4476515059271433 0.0 11 0.0 0.0 0.0 2.8012426927903804 0.0 12 0.0 0.0 0.0 3.1114336657870085 0.0 13 0.0 0.0 0.0 3.2524843608534892 0.0 14 0.0 0.0 0.0 3.3202369169452517 0.0 15 0.0 0.0 0.0 3.3966695158103364 0.0 16 0.0 0.0 0.0 3.545676916752362 0.0 17 0.0 0.0 0.0 3.7215683390617595 0.0 18 0.0 0.0 0.0 3.9473700073177582 0.0 19 0.0 0.0 0.0 4.075762306673145 0.0 20 0.0 0.0 0.0 4.217415782487772 0.0 21 0.0 0.0 0.0 4.378840466841634 0.0 22 0.0 0.0 0.0 4.554611333001402 0.0 23 0.0 0.0 0.0 4.747742284707814 0.0 24 0.0 0.0 0.0 4.8934946696098445 0.0 25 0.0 0.0 0.0 5.021284188217083 0.0 26 0.0 0.0 0.0 5.150038156021358 0.0 27 0.0 0.0 0.0 5.276501556982672 0.0 28 0.0 0.0 0.0 5.410680551520273 0.0 29 0.0 0.0 0.0 5.558000166367487 0.0 30 0.0 0.0 0.0 5.759570048547961 0.0 31 0.0 0.0 0.0 5.917378048412939 0.0 32 0.0 0.0 0.0 6.068073235449777 0.0 33 0.0 0.0 0.0 6.221058989329575 0.0 34 0.0 0.0 0.0 6.39068149185824 0.0 35 0.0 0.0 0.0 6.5715157163024465 0.0 36 0.0 0.0 0.0 6.740294325783705 0.0 37 0.0 0.0 0.0 6.91220739515533 0.0 38 0.0 0.0 0.0 7.120648977864685 0.0 39 0.0 0.0 0.0 7.399615908107281 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAACCG 25 3.889863E-5 45.0 1 CGTTTTT 3395 0.0 42.945507 1 TGCGTAG 60 3.6379788E-12 41.249996 1 ATAACGC 50 1.0804797E-9 40.5 11 AACGTAG 45 1.9272193E-8 40.0 1 GTATGCG 40 3.456662E-7 39.375 1 TCGTAAG 40 3.456662E-7 39.375 1 AATACGG 80 0.0 39.375 2 ACGTAGG 120 0.0 39.374996 2 TTGCGAG 115 0.0 39.130432 1 CGACGGG 150 0.0 39.000004 3 TACGCGG 75 0.0 39.000004 2 TAGGGAC 525 0.0 39.0 5 TACGGGA 220 0.0 38.863636 4 TTACGGG 290 0.0 38.01724 3 CAATAGG 95 0.0 37.894737 2 ACCCGCT 250 0.0 37.8 34 ACGGGAT 210 0.0 37.5 5 CTATACG 30 1.13964816E-4 37.499996 1 GCGATCG 30 1.13964816E-4 37.499996 9 >>END_MODULE