SRR1547080_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547080_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	765889
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4110	0.5366312873014235	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	45	3.8380676E-10	45.0	25
CTTAACG	25	3.8895814E-5	45.0	1
TCGATAG	50	2.1827873E-11	45.0	1
AACTACG	20	7.0318114E-4	45.0	1
CGTTTTT	2710	0.0	42.675278	1
GACACGA	85	0.0	42.35294	25
CGGTCTA	50	1.0804797E-9	40.5	31
AGGGCGA	600	0.0	39.75	6
TAACGGG	190	0.0	39.078945	3
ACATACG	75	0.0	39.0	17
CGTGCGG	70	0.0	38.57143	2
ACACGAC	100	0.0	38.25	26
CACGACC	100	0.0	38.25	27
AGACACG	100	0.0	38.25	24
GGGCGAT	1020	0.0	37.941177	7
ATAGGGC	350	0.0	37.928574	4
ATATCCG	30	1.13956616E-4	37.500004	1
TACGAAT	30	1.13956616E-4	37.500004	12
TATAACG	30	1.13956616E-4	37.500004	1
ATGGGAC	355	0.0	37.394367	5