##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547079_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 710035 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.675896258635138 31.0 31.0 33.0 30.0 34.0 2 32.06173357651383 33.0 31.0 34.0 30.0 34.0 3 32.15413606371517 33.0 31.0 34.0 30.0 34.0 4 35.797240981078396 37.0 35.0 37.0 35.0 37.0 5 35.73672142922532 37.0 35.0 37.0 33.0 37.0 6 35.798309942467625 37.0 35.0 37.0 35.0 37.0 7 36.140752216440035 37.0 35.0 37.0 35.0 37.0 8 36.09025329737266 37.0 35.0 37.0 35.0 37.0 9 37.892878520072955 39.0 38.0 39.0 35.0 39.0 10 37.453194560831506 39.0 37.0 39.0 35.0 39.0 11 37.06913462012436 39.0 37.0 39.0 33.0 39.0 12 35.87371045089326 37.0 35.0 39.0 32.0 39.0 13 35.28014252818523 37.0 35.0 39.0 30.0 39.0 14 36.178130655531064 38.0 35.0 41.0 31.0 41.0 15 36.567180491102555 38.0 35.0 41.0 32.0 41.0 16 36.81302330166823 38.0 35.0 41.0 32.0 41.0 17 36.811955748660274 38.0 35.0 41.0 32.0 41.0 18 36.79207926369827 37.0 35.0 41.0 32.0 41.0 19 36.751922088347754 37.0 35.0 41.0 32.0 41.0 20 36.55689367425549 36.0 35.0 40.0 32.0 41.0 21 36.426204342039476 36.0 35.0 40.0 32.0 41.0 22 36.326805016654106 36.0 35.0 40.0 32.0 41.0 23 36.35320512369108 36.0 35.0 40.0 32.0 41.0 24 36.2407881301626 36.0 35.0 40.0 32.0 41.0 25 36.16033857485898 36.0 35.0 40.0 31.0 41.0 26 36.02151865753097 35.0 35.0 40.0 31.0 41.0 27 35.95678804565972 35.0 35.0 40.0 31.0 41.0 28 36.03045765349596 36.0 35.0 40.0 31.0 41.0 29 36.09666143218292 36.0 35.0 40.0 31.0 41.0 30 36.0727907779194 36.0 35.0 40.0 31.0 41.0 31 35.91413944383024 36.0 35.0 40.0 31.0 41.0 32 35.74659840712078 35.0 35.0 40.0 31.0 41.0 33 35.658846394896024 36.0 35.0 40.0 30.0 41.0 34 35.578289802615366 36.0 35.0 40.0 30.0 41.0 35 35.53000063377157 36.0 35.0 40.0 30.0 41.0 36 35.3832796974797 36.0 35.0 40.0 30.0 41.0 37 35.29976409613611 36.0 34.0 40.0 29.0 41.0 38 35.23725309315738 35.0 34.0 40.0 29.0 41.0 39 35.23497996577633 36.0 34.0 40.0 29.0 41.0 40 35.101597808558736 36.0 34.0 40.0 29.0 41.0 41 35.1179716492849 35.0 34.0 40.0 29.0 41.0 42 35.03111114240847 35.0 34.0 40.0 29.0 41.0 43 34.905873654115645 35.0 34.0 40.0 29.0 41.0 44 34.772647827219785 35.0 34.0 40.0 28.0 41.0 45 34.6796242438753 35.0 34.0 40.0 27.0 41.0 46 34.657736590449765 35.0 34.0 40.0 28.0 41.0 47 34.62866619251164 35.0 34.0 40.0 28.0 41.0 48 34.61613582429035 35.0 34.0 40.0 28.0 41.0 49 34.6151175646271 35.0 34.0 40.0 28.0 41.0 50 34.4757272528819 35.0 34.0 39.0 27.0 41.0 51 34.10566662206793 35.0 34.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 1.0 13 1.0 14 8.0 15 19.0 16 52.0 17 105.0 18 278.0 19 524.0 20 878.0 21 1415.0 22 2191.0 23 3247.0 24 4634.0 25 6830.0 26 9389.0 27 11250.0 28 12200.0 29 13785.0 30 16477.0 31 20144.0 32 25785.0 33 34887.0 34 72017.0 35 148859.0 36 38188.0 37 49316.0 38 75351.0 39 162022.0 40 180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.63332089263205 23.769250811579713 30.186258423880513 13.411169871907722 2 30.30639334680685 25.83534614490835 30.179639031878708 13.678621476406091 3 29.68473385114818 24.388516059067513 32.394741104311755 13.532008985472546 4 25.67479067933271 27.454421260923755 31.519432140669124 15.351355919074411 5 23.722774229439395 32.49670790876506 29.7381115015457 14.042406360249846 6 22.635081369228278 40.93812276859591 25.17326610660038 11.25352975557543 7 88.6215468251565 3.6989725858584435 5.967452308689008 1.7120282802960418 8 89.48699711986029 2.7221193321455983 5.449590513143718 2.341293034850395 9 86.01759068214947 4.109234051842515 7.192603181533305 2.680572084474709 10 58.357968269169824 21.822163696155826 10.686797129718958 9.13307090495539 11 53.5282063560247 16.96296661432183 17.99601428098615 11.51281274866732 12 47.04035716549184 19.711141000091544 19.884512735287696 13.363989099128917 13 22.360165343961917 42.426781778363036 21.474997711380425 13.738055166294618 14 14.180850239776913 44.53287513995789 26.557845739998733 14.728428880266467 15 13.615948509580514 21.856246523058722 51.25127634553226 13.2765286218285 16 15.456421162337067 17.249853880442515 48.73280894603787 18.560916011182545 17 15.519657481673438 17.3119634947573 27.9484814128881 39.219897610681166 18 22.20073658340786 22.14904899054272 33.576091319442 22.07412310660742 19 30.118796960713208 24.181343173223855 24.463864457385903 21.235995408677034 20 32.44741456407078 23.433774391403244 22.908307336962263 21.21050370756371 21 22.04004027970452 28.581689635017995 26.827973268923362 22.550296816354123 22 21.762307491884204 25.22284112755005 25.32537128451414 27.689480096051604 23 20.22125669861345 30.699895075594863 23.68756469751491 25.391283528276777 24 20.627997211405074 23.232798383178295 37.29562627194434 18.843578133472295 25 16.32243480955164 24.76751146070264 36.21765124254438 22.692402487201335 26 16.225679015823165 34.965881963565174 27.072468258606968 21.73597076200469 27 18.46275183617709 32.462484243734465 29.02547057539417 20.049293344694274 28 14.828423950931995 28.191990535677817 39.497489560373786 17.4820959530164 29 15.572190103304766 23.87840036054561 38.6864027829614 21.863006753188223 30 19.526643052807255 27.68624081911455 32.02137922778455 20.765736900293646 31 30.57905596203004 24.969332497693774 22.640151541825404 21.81145999845078 32 32.54008605209602 25.800981641750052 23.940791651115788 17.71814065503813 33 27.639764236974234 26.817973761856813 24.08839000894322 21.453871992225736 34 19.14060574478723 26.93219348341983 29.247853979029202 24.679346792763738 35 19.631004105431423 24.46062518044885 31.48211003682917 24.426260677290557 36 30.69862753244558 22.8173259064694 26.58798509932609 19.896061461758926 37 21.485842247213167 29.404184300773906 29.010119219475094 20.099854232537833 38 19.956058504158243 33.11456477497588 23.142802819579316 23.786573901286555 39 20.705880696022028 29.930637222108768 27.551177054652236 21.81230502721697 40 23.770518354728992 24.831311132549803 24.218946953319204 27.179223559402 41 16.549747547656104 22.960699120465893 27.0909180533354 33.398635278542606 42 23.004781454435346 25.45649158140092 23.22829156309196 28.310435401071775 43 22.433682846620236 26.337574908279173 24.905955340229706 26.32278690487089 44 20.02267493855937 31.020583492363052 26.60967417099157 22.34706739808601 45 17.949960213228923 35.38867802291436 22.05637750251748 24.60498426133923 46 22.509312921194024 31.08043969663467 25.769997253656513 20.640250128514793 47 22.233411029033782 24.67300907701733 28.64647517375904 24.44710472018985 48 23.786855577541953 20.66616434401121 30.627645116085827 24.919334962361013 49 20.43349975705423 20.731513235263048 32.74641390917349 26.088573098509226 50 18.564577802502694 30.78003197025499 27.54807861584288 23.10731161139944 51 17.727435971466196 33.049356721851744 23.843049990493427 25.38015731618864 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 340.0 1 561.0 2 782.0 3 2467.0 4 4152.0 5 3090.0 6 2028.0 7 2171.5 8 2315.0 9 2492.0 10 2669.0 11 2684.0 12 2699.0 13 2668.0 14 2637.0 15 2522.5 16 2408.0 17 2241.0 18 2074.0 19 1924.5 20 1775.0 21 1845.5 22 1916.0 23 2045.5 24 2175.0 25 2495.5 26 3388.0 27 3960.0 28 4529.0 29 5098.0 30 5742.5 31 6387.0 32 8356.5 33 10326.0 34 11195.5 35 12065.0 36 13543.5 37 15022.0 38 19423.0 39 23824.0 40 35438.0 41 47052.0 42 59587.0 43 72122.0 44 74176.0 45 76230.0 46 71060.0 47 65890.0 48 64251.5 49 62613.0 50 59983.0 51 57353.0 52 53386.0 53 49419.0 54 43466.0 55 37513.0 56 33875.0 57 30237.0 58 28777.5 59 27318.0 60 25494.5 61 23671.0 62 21603.0 63 19535.0 64 15766.5 65 11998.0 66 9959.0 67 7920.0 68 6573.0 69 5226.0 70 4431.5 71 3637.0 72 3013.5 73 2390.0 74 1717.0 75 923.5 76 803.0 77 564.0 78 325.0 79 208.0 80 91.0 81 108.5 82 126.0 83 74.0 84 22.0 85 17.5 86 13.0 87 9.0 88 5.0 89 5.0 90 5.0 91 4.5 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 710035.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.29343673198102 #Duplication Level Percentage of deduplicated Percentage of total 1 79.79188425388216 16.990434390855928 2 6.63809427617754 2.8269568098142366 3 2.0309566826935783 1.2973814288498933 4 1.0016236550220823 0.8531203970987318 5 0.6559611321677877 0.6983833433226715 6 0.41980085964353225 0.536340182691048 7 0.38204793632286055 0.5694579492472321 8 0.28240858096416444 0.48107594010631805 9 0.24966714967342546 0.47846444900626095 >10 5.867222175473952 35.6035020761595 >50 2.5425560462576273 35.03621732269273 >100 0.13644607054523916 4.067142897343191 >500 0.0 0.0 >1k 0.0013311811760511136 0.5615228128122705 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2366 0.3332230101333033 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1596 0.2247776518058969 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.408381276979304E-4 0.0 0.0 0.06844733006119416 0.0 2 1.408381276979304E-4 0.0 0.0 0.2540719823670664 0.0 3 1.408381276979304E-4 0.0 0.0 0.35857387311893074 0.0 4 1.408381276979304E-4 0.0 0.0 0.5965903089284331 0.0 5 1.408381276979304E-4 0.0 0.0 1.0181188251283388 0.0 6 1.408381276979304E-4 0.0 0.0 1.4942925348750413 0.0 7 1.408381276979304E-4 0.0 0.0 1.7938552324885393 0.0 8 1.408381276979304E-4 0.0 0.0 2.6252227002894224 0.0 9 1.408381276979304E-4 0.0 0.0 2.99013428915476 0.0 10 1.408381276979304E-4 0.0 0.0 3.540107177815178 0.0 11 1.408381276979304E-4 0.0 0.0 3.9881132620222948 0.0 12 1.408381276979304E-4 0.0 0.0 4.369925426211384 0.0 13 1.408381276979304E-4 0.0 0.0 4.528509157999253 0.0 14 1.408381276979304E-4 0.0 0.0 4.585689437844613 0.0 15 1.408381276979304E-4 0.0 0.0 4.663291246206173 0.0 16 1.408381276979304E-4 0.0 0.0 4.855957804896942 0.0 17 1.408381276979304E-4 0.0 0.0 5.070876787763983 0.0 18 1.408381276979304E-4 0.0 0.0 5.3943819670861295 0.0 19 1.408381276979304E-4 0.0 0.0 5.541416972402769 0.0 20 1.408381276979304E-4 0.0 0.0 5.708310153724816 0.0 21 1.408381276979304E-4 0.0 0.0 5.908722809438971 0.0 22 1.408381276979304E-4 0.0 0.0 6.091389861063187 0.0 23 1.408381276979304E-4 0.0 0.0 6.309829797122677 0.0 24 1.408381276979304E-4 0.0 0.0 6.460526593759463 0.0 25 2.816762553958608E-4 0.0 0.0 6.588830128092277 0.0 26 2.816762553958608E-4 0.0 0.0 6.715302766765019 0.0 27 2.816762553958608E-4 0.0 0.0 6.826001535135592 0.0 28 2.816762553958608E-4 0.0 0.0 6.951629145042146 0.0 29 2.816762553958608E-4 0.0 0.0 7.082608603801221 0.0 30 2.816762553958608E-4 0.0 0.0 7.2842888026646575 0.0 31 2.816762553958608E-4 0.0 0.0 7.4561113184561325 0.0 32 2.816762553958608E-4 0.0 0.0 7.607089791348314 0.0 33 2.816762553958608E-4 0.0 0.0 7.755251501686536 0.0 34 2.816762553958608E-4 0.0 0.0 7.9236939024132615 0.0 35 2.816762553958608E-4 0.0 0.0 8.138472047152606 0.0 36 2.816762553958608E-4 0.0 0.0 8.30423852345307 0.0 37 2.816762553958608E-4 0.0 0.0 8.472399247924399 0.0 38 2.816762553958608E-4 0.0 0.0 8.646897688142134 0.0 39 2.816762553958608E-4 0.0 0.0 8.808720696867056 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCATA 25 3.889293E-5 45.000004 37 GCAAACG 25 3.889293E-5 45.000004 1 CGTCTTA 25 3.889293E-5 45.000004 23 TCGATAG 35 1.2110468E-7 45.000004 1 CGCTCGA 25 3.889293E-5 45.000004 37 TACGACC 25 3.889293E-5 45.000004 11 CGGGCAA 25 3.889293E-5 45.000004 6 GTATCGG 35 1.2110468E-7 45.000004 2 GCTACGA 35 1.2110468E-7 45.000004 10 TATCGTC 35 1.2110468E-7 45.000004 33 TATCGGA 25 3.889293E-5 45.000004 20 GCCCGTT 25 3.889293E-5 45.000004 21 GTACGAC 25 3.889293E-5 45.000004 10 AGCCGAC 20 7.0314633E-4 45.0 27 CTCACGT 40 6.8084773E-9 45.0 45 TCGCAAG 20 7.0314633E-4 45.0 1 CGACGTG 20 7.0314633E-4 45.0 21 CGACGGT 45 3.8380676E-10 45.0 28 CTTCACG 20 7.0314633E-4 45.0 18 GCTATCC 20 7.0314633E-4 45.0 23 >>END_MODULE