##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547078_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 461834 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.66735017343894 31.0 31.0 33.0 30.0 34.0 2 32.048679828683035 33.0 31.0 34.0 30.0 34.0 3 32.1421246595097 33.0 31.0 34.0 30.0 34.0 4 35.79907066175292 37.0 35.0 37.0 35.0 37.0 5 35.73970517545265 37.0 35.0 37.0 33.0 37.0 6 35.80153908114171 37.0 35.0 37.0 35.0 37.0 7 36.10796953017751 37.0 35.0 37.0 35.0 37.0 8 36.067229783861734 37.0 35.0 37.0 35.0 37.0 9 37.850916130038065 39.0 38.0 39.0 35.0 39.0 10 37.424286648449446 39.0 37.0 39.0 35.0 39.0 11 37.09557763178978 39.0 37.0 39.0 33.0 39.0 12 36.26770441327403 38.0 35.0 39.0 33.0 39.0 13 35.897898379071265 38.0 35.0 39.0 31.0 39.0 14 36.87542926679283 39.0 35.0 41.0 31.0 41.0 15 37.158015650645034 39.0 35.0 41.0 32.0 41.0 16 37.341269806900314 39.0 35.0 41.0 33.0 41.0 17 37.32176496316858 39.0 35.0 41.0 33.0 41.0 18 37.261864652667406 39.0 35.0 41.0 33.0 41.0 19 37.20675827245287 38.0 35.0 41.0 33.0 41.0 20 37.040070674744605 38.0 35.0 41.0 32.0 41.0 21 36.94163487313624 38.0 35.0 41.0 32.0 41.0 22 36.87281577363295 38.0 35.0 41.0 32.0 41.0 23 36.83798940744943 38.0 35.0 41.0 32.0 41.0 24 36.76033596487049 38.0 35.0 41.0 32.0 41.0 25 36.66031084762057 38.0 35.0 41.0 32.0 41.0 26 36.52804037814453 38.0 35.0 41.0 31.0 41.0 27 36.41860278801474 38.0 35.0 41.0 31.0 41.0 28 36.483377144168685 38.0 35.0 41.0 31.0 41.0 29 36.51594512313948 38.0 35.0 41.0 31.0 41.0 30 36.479735142930146 38.0 35.0 41.0 31.0 41.0 31 36.33925393106614 38.0 35.0 40.0 31.0 41.0 32 36.231483606663865 38.0 35.0 41.0 31.0 41.0 33 36.12549530783788 38.0 35.0 41.0 30.0 41.0 34 36.01704292018344 38.0 35.0 41.0 30.0 41.0 35 35.93887197564493 38.0 35.0 41.0 30.0 41.0 36 35.80288805068488 38.0 35.0 41.0 30.0 41.0 37 35.72565467245807 38.0 35.0 41.0 30.0 41.0 38 35.65797017976156 37.0 35.0 40.0 30.0 41.0 39 35.61769163812106 37.0 35.0 40.0 29.0 41.0 40 35.493703365278435 37.0 35.0 40.0 29.0 41.0 41 35.46562834265126 37.0 35.0 40.0 29.0 41.0 42 35.3938428093211 37.0 35.0 40.0 29.0 41.0 43 35.272247171061466 37.0 34.0 40.0 28.0 41.0 44 35.14825673293868 36.0 34.0 40.0 28.0 41.0 45 35.063074611223946 36.0 34.0 40.0 28.0 41.0 46 35.032942572439445 36.0 34.0 40.0 28.0 41.0 47 34.99134537517809 36.0 34.0 40.0 28.0 41.0 48 34.92979945175106 36.0 34.0 40.0 28.0 41.0 49 34.860473676689026 36.0 34.0 40.0 27.0 41.0 50 34.75036051914757 35.0 34.0 40.0 27.0 41.0 51 34.37928779604793 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 3.0 14 3.0 15 16.0 16 28.0 17 79.0 18 143.0 19 346.0 20 576.0 21 924.0 22 1395.0 23 2032.0 24 2970.0 25 4241.0 26 5808.0 27 6974.0 28 7667.0 29 8490.0 30 10095.0 31 12292.0 32 15530.0 33 20778.0 34 39707.0 35 71842.0 36 29214.0 37 38584.0 38 58862.0 39 123130.0 40 103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.112473312921956 22.978386173386976 28.987038632928712 13.922101880762353 2 31.243260565484572 25.03778413888973 30.405297141397124 13.313658154228575 3 29.36682877397506 24.819307370180628 31.97815665368942 13.835707202154888 4 26.859217814192977 27.24658643581893 31.113127227531972 14.78106852245612 5 24.181199305378122 31.39591281715941 29.53268923466007 14.890198642802394 6 22.392028304542325 40.648154964770896 26.256187288073203 10.703629442613579 7 88.17085792730721 3.835793813361511 6.244667997592209 1.7486802617390667 8 89.4347319599683 2.5684553324354638 5.857732431999376 2.1390802755968594 9 85.19944395605347 4.528033882304031 7.601649077374121 2.6708730842683734 10 52.74470913791536 24.050849439408964 12.431956070796 10.772485351879679 11 43.865977818869986 20.733856753725362 21.317616286371294 14.082549141033358 12 38.71282755275705 21.145693041222604 24.078131969495534 16.06334743652481 13 23.50952939800881 34.63062485655019 25.201479319409138 16.658366426031865 14 17.042054071376295 36.97562327589567 28.79692703438898 17.185395618339058 15 16.170961860755163 23.10029144671029 44.36161044877597 16.36713624375858 16 19.865362879302953 20.275250414651154 40.77677260660757 19.082614099438327 17 20.144900548681992 20.080158671730537 27.577874301155823 32.197066478431644 18 24.251787438776702 22.902817895607512 31.384653360298287 21.460741305317494 19 28.89349852977477 24.087226146191057 25.620677559469417 21.398597764564755 20 30.7909335388906 24.2442089581971 24.146771350745073 20.81808615216723 21 24.970443925739552 26.54914969447897 27.734424057128752 20.74598232265273 22 24.037857758415363 23.566476266364106 27.049329412732714 25.34633656248782 23 21.086147836668587 28.15059090495719 26.467085576202702 24.296175682171516 24 22.19888531377075 23.685133619439018 34.26447598054712 19.851505086243108 25 19.85821745475647 25.301082207026766 32.53333448814942 22.30736585006734 26 19.468467024948357 31.67848187877029 26.80876678633448 22.044284309946864 27 20.057423229991727 29.579242758220488 29.38739893554827 20.975935076239516 28 17.89192653637454 27.00862214561942 35.52661778907573 19.572833528930307 29 18.796580589562485 24.24052798191558 34.959530913704924 22.00336051481701 30 21.322379902735612 25.996137140184565 31.243693621517686 21.43778933556213 31 28.292200227787472 24.511621058648778 25.251280763217952 21.944897950345794 32 29.87523655685809 25.777660371475463 25.00552146442228 19.341581607244162 33 26.48505740157719 25.718115166921447 26.043989831844343 21.752837599657017 34 21.460091721267816 25.96495710579992 28.52431826153986 24.050632911392405 35 21.769510256932143 26.520784524309597 29.114357106666034 22.59534811209222 36 28.45589540830688 24.35637047077521 26.748788525747347 20.43894559517056 37 22.69625016780921 28.628901293538373 27.84355417747502 20.831294361177395 38 22.498776616706436 30.094795965649997 24.31458056357912 23.091846854064446 39 21.89466345050386 29.159178406093964 26.021903974155215 22.924254169246957 40 24.348142406145932 25.683254156255273 25.51544494342123 24.45315849417756 41 20.105275921651504 23.907507892446205 27.188340399364275 28.79887578653802 42 23.375498555758128 26.901657305438754 24.208265307448134 25.51457883135499 43 23.399966221629416 26.69682180177293 25.560482770865722 24.34272920573193 44 21.71321297262653 29.117605026914433 26.668023575570444 22.501158424888594 45 19.88116942451184 31.42514409939502 24.462685726906205 24.231000749186936 46 23.223928944166087 29.097034865341225 26.679283032431567 20.99975315806112 47 23.13320370522742 26.019089109939937 27.441028594689865 23.40667859014278 48 24.191376122156445 23.563228346115704 28.954775958461266 23.290619573266586 49 21.8966122026529 22.770086221456197 30.338823040313184 24.99447853557772 50 19.8976255537704 29.44694414010229 26.850773221547136 23.804657084580175 51 20.126928723307508 31.328356075992676 24.519632595261502 24.025082605438318 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 254.0 1 416.0 2 578.0 3 2057.0 4 3536.0 5 2530.5 6 1525.0 7 1590.0 8 1655.0 9 1707.5 10 1760.0 11 1757.0 12 1754.0 13 1679.5 14 1605.0 15 1518.5 16 1432.0 17 1498.5 18 1565.0 19 1484.5 20 1404.0 21 1486.5 22 1569.0 23 1722.0 24 1875.0 25 1938.5 26 2738.0 27 3474.0 28 3682.0 29 3890.0 30 4973.5 31 6057.0 32 6752.0 33 7447.0 34 8567.0 35 9687.0 36 10325.0 37 10963.0 38 13371.5 39 15780.0 40 21462.0 41 27144.0 42 32298.5 43 37453.0 44 38638.0 45 39823.0 46 39119.5 47 38416.0 48 38261.5 49 38107.0 50 36348.5 51 34590.0 52 33484.5 53 32379.0 54 29803.0 55 27227.0 56 24727.5 57 22228.0 58 20998.0 59 19768.0 60 18638.5 61 17509.0 62 15626.5 63 13744.0 64 12284.5 65 10825.0 66 9409.5 67 7994.0 68 6707.5 69 5421.0 70 4592.0 71 3763.0 72 3046.0 73 2329.0 74 1953.5 75 1244.0 76 910.0 77 661.0 78 412.0 79 294.0 80 176.0 81 140.5 82 105.0 83 89.5 84 74.0 85 45.5 86 17.0 87 17.0 88 17.0 89 11.0 90 5.0 91 3.5 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 461834.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.106905798249404 #Duplication Level Percentage of deduplicated Percentage of total 1 75.32970520219239 19.666255175235346 2 5.439132590875086 2.839978443483281 3 2.1953334422998334 1.71940090121605 4 1.3386076742044946 1.3978761780508187 5 1.0965584946471585 1.431387466101177 6 0.9065028613898524 1.4199590884889046 7 0.773370258286041 1.4133213136169036 8 0.7068301359882736 1.4762518220487737 9 0.6710699993627322 1.5767605131654718 >10 11.393208478867397 63.881194331610025 >50 0.13138653432280847 2.100825175930656 >100 0.017462767220120114 0.6302258433116352 >500 0.0 0.0 >1k 8.315603438152434E-4 0.44656374774096924 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2057 0.445398130064049 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.165280165600627E-4 0.0 0.0 0.046986579593533605 0.0 2 2.165280165600627E-4 0.0 0.0 0.1444241870455618 0.0 3 2.165280165600627E-4 0.0 0.0 0.20656772779829982 0.0 4 2.165280165600627E-4 0.0 0.0 0.3159143761611315 0.0 5 2.165280165600627E-4 0.0 0.0 0.5690356275198448 0.0 6 2.165280165600627E-4 0.0 0.0 0.8799698593000949 0.0 7 2.165280165600627E-4 0.0 0.0 1.0941160676779969 0.0 8 2.165280165600627E-4 0.0 0.0 1.6902176972678495 0.0 9 2.165280165600627E-4 0.0 0.0 1.9530827093717655 0.0 10 2.165280165600627E-4 0.0 0.0 2.3475967555442 0.0 11 2.165280165600627E-4 0.0 0.0 2.686896157493818 0.0 12 2.165280165600627E-4 0.0 0.0 2.9991295573734287 0.0 13 2.165280165600627E-4 0.0 0.0 3.155895841362914 0.0 14 2.165280165600627E-4 0.0 0.0 3.2301649510430153 0.0 15 2.165280165600627E-4 0.0 0.0 3.2990208603091156 0.0 16 2.165280165600627E-4 0.0 0.0 3.4503739438845993 0.0 17 2.165280165600627E-4 0.0 0.0 3.608439395973445 0.0 18 2.165280165600627E-4 0.0 0.0 3.805046835009982 0.0 19 2.165280165600627E-4 0.0 0.0 3.919373627753695 0.0 20 2.165280165600627E-4 0.0 0.0 4.055136694136855 0.0 21 2.165280165600627E-4 0.0 0.0 4.216233538457541 0.0 22 2.165280165600627E-4 0.0 0.0 4.381444415092869 0.0 23 2.165280165600627E-4 0.0 0.0 4.553367660241559 0.0 24 2.165280165600627E-4 0.0 0.0 4.689347254641278 0.0 25 2.165280165600627E-4 0.0 0.0 4.802591407302191 0.0 26 2.165280165600627E-4 0.0 0.0 4.923630568559266 0.0 27 2.165280165600627E-4 0.0 0.0 5.046185425932261 0.0 28 2.165280165600627E-4 0.0 0.0 5.1698229233880575 0.0 29 2.165280165600627E-4 0.0 0.0 5.313597526383939 0.0 30 2.165280165600627E-4 0.0 0.0 5.514752053768237 0.0 31 2.165280165600627E-4 0.0 0.0 5.675199314039244 0.0 32 2.165280165600627E-4 0.0 0.0 5.821572253233846 0.0 33 2.165280165600627E-4 0.0 0.0 5.970543528627169 0.0 34 2.165280165600627E-4 0.0 0.0 6.128175924682894 0.0 35 2.165280165600627E-4 0.0 0.0 6.3087602904939875 0.0 36 2.165280165600627E-4 0.0 0.0 6.477435615394276 0.0 37 2.165280165600627E-4 0.0 0.0 6.651740668725126 0.0 38 2.165280165600627E-4 0.0 0.0 6.844883659496702 0.0 39 2.165280165600627E-4 0.0 0.0 7.1332989775547055 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTC 20 7.0288975E-4 45.000004 5 CGTTAGA 20 7.0288975E-4 45.000004 42 GATATAC 20 7.0288975E-4 45.000004 9 GTCGTAA 20 7.0288975E-4 45.000004 22 AACTCGT 20 7.0288975E-4 45.000004 19 AAGTGCG 20 7.0288975E-4 45.000004 1 ATACCCG 20 7.0288975E-4 45.000004 25 ACTACGG 25 3.8871694E-5 45.0 2 ATCGGGT 35 1.2098099E-7 45.0 4 AATACGG 25 3.8871694E-5 45.0 2 TACGTAG 35 1.2098099E-7 45.0 1 TAGTACG 25 3.8871694E-5 45.0 1 CGGGTAT 30 2.162671E-6 44.999996 6 GCGATAT 30 2.162671E-6 44.999996 9 GGCGATA 100 0.0 42.75 8 CGTTTTT 1430 0.0 42.639862 1 CGCAGTA 120 0.0 41.249996 37 ACGGGAT 175 0.0 41.142857 5 TAGGCGG 55 6.002665E-11 40.909092 2 AGTACGG 105 0.0 40.714287 2 >>END_MODULE