##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547077_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 853143 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.69982406232015 31.0 31.0 33.0 30.0 34.0 2 32.08860062146674 33.0 31.0 34.0 30.0 34.0 3 32.17977642669517 33.0 31.0 34.0 30.0 34.0 4 35.83458927753026 37.0 35.0 37.0 35.0 37.0 5 35.78967535336983 37.0 35.0 37.0 35.0 37.0 6 35.837446946174325 37.0 35.0 37.0 35.0 37.0 7 36.128522416523374 37.0 35.0 37.0 35.0 37.0 8 36.0650266133579 37.0 35.0 37.0 35.0 37.0 9 37.8222572300306 39.0 38.0 39.0 35.0 39.0 10 37.451724974593944 39.0 37.0 39.0 35.0 39.0 11 37.15671229793833 39.0 37.0 39.0 34.0 39.0 12 36.3936104498308 38.0 35.0 39.0 33.0 39.0 13 36.06731462369146 38.0 35.0 39.0 32.0 39.0 14 37.05201941526801 39.0 35.0 41.0 32.0 41.0 15 37.269565594513466 39.0 35.0 41.0 32.0 41.0 16 37.42653927887822 39.0 35.0 41.0 33.0 41.0 17 37.40936044719349 39.0 35.0 41.0 33.0 41.0 18 37.324053529127006 39.0 35.0 41.0 33.0 41.0 19 37.27638156792003 39.0 35.0 41.0 33.0 41.0 20 37.097685851023805 39.0 35.0 41.0 32.0 41.0 21 37.00970528973455 38.0 35.0 41.0 32.0 41.0 22 36.94496467766834 38.0 35.0 41.0 32.0 41.0 23 36.919853998684864 38.0 35.0 41.0 32.0 41.0 24 36.828376954391 38.0 35.0 41.0 32.0 41.0 25 36.72444361613469 38.0 35.0 41.0 32.0 41.0 26 36.589269325306546 38.0 35.0 41.0 32.0 41.0 27 36.49259268375876 38.0 35.0 41.0 31.0 41.0 28 36.52347730685243 38.0 35.0 41.0 31.0 41.0 29 36.538441972799404 38.0 35.0 41.0 31.0 41.0 30 36.495360097896835 38.0 35.0 41.0 31.0 41.0 31 36.348193679137026 38.0 35.0 41.0 31.0 41.0 32 36.25560544949674 38.0 35.0 41.0 31.0 41.0 33 36.1261968978237 38.0 35.0 41.0 30.0 41.0 34 35.95080777782857 38.0 35.0 41.0 30.0 41.0 35 35.89310350081991 38.0 35.0 41.0 30.0 41.0 36 35.79466513820075 38.0 35.0 41.0 30.0 41.0 37 35.711659123968666 38.0 35.0 41.0 29.0 41.0 38 35.634400094708624 38.0 35.0 40.0 29.0 41.0 39 35.58180750472078 37.0 35.0 40.0 29.0 41.0 40 35.44310156679478 37.0 35.0 40.0 29.0 41.0 41 35.401010147185175 37.0 35.0 40.0 29.0 41.0 42 35.31883048914426 37.0 35.0 40.0 28.0 41.0 43 35.209636602539085 37.0 34.0 40.0 28.0 41.0 44 35.07899027478395 36.0 34.0 40.0 27.0 41.0 45 34.99604286737394 36.0 34.0 40.0 27.0 41.0 46 34.98114852961344 36.0 34.0 40.0 27.0 41.0 47 34.93525704366091 36.0 34.0 40.0 27.0 41.0 48 34.88012560614106 36.0 34.0 40.0 27.0 41.0 49 34.81455043292859 36.0 34.0 40.0 27.0 41.0 50 34.68764322042143 35.0 34.0 40.0 27.0 41.0 51 34.31788926358184 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 5.0 12 6.0 13 5.0 14 10.0 15 21.0 16 47.0 17 141.0 18 308.0 19 609.0 20 1074.0 21 1759.0 22 2595.0 23 3747.0 24 5582.0 25 8402.0 26 11229.0 27 13210.0 28 14166.0 29 15749.0 30 18097.0 31 22340.0 32 28074.0 33 37801.0 34 72251.0 35 127853.0 36 54593.0 37 71573.0 38 110598.0 39 231111.0 40 184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.39711396565406 23.584674550456374 27.54766785872943 13.470543625160142 2 33.39276065091081 24.30635895740808 28.921528981659584 13.379351410021531 3 30.959639825914298 24.185863331235208 31.078025606492698 13.776471236357796 4 27.181492434445335 26.651686762945953 30.911699445462247 15.255121357146455 5 25.03003599631011 30.919083905042882 28.546093679488667 15.504786419158338 6 22.747651917673824 39.494316896464014 26.552875660938437 11.205155524923724 7 85.6487130527942 4.541091001156898 7.438143429647785 2.3720525164011192 8 86.64643559168861 3.789634328594386 7.100216493600721 2.4637135861162784 9 82.12984224215636 5.117078848446274 9.164114339565582 3.5889645698317865 10 50.36928158585372 23.789564000407903 14.077475874501696 11.76367853923668 11 43.176349099740605 21.77384096218336 20.988157905532837 14.061652032543195 12 37.43897564652116 22.118214648657965 24.578997893670813 15.863811811150066 13 24.563525692644728 33.023303244590885 25.97348861796909 16.439682444795302 14 18.254384083324833 35.1851916970543 29.76476393758139 16.79566028203947 15 17.571849033514898 22.908000182853286 43.54639257428122 15.973758209350603 16 21.110177309079486 20.68680162645653 39.796376457405145 18.40664460705884 17 21.29174124384775 20.18348623853211 28.315417227826988 30.209355289793155 18 24.779198797856868 22.876000858003877 31.787402580810014 20.557397763329245 19 29.431759974588083 23.86844878291213 25.966455799320865 20.733335443178927 20 30.6576974786173 24.44092022087739 25.177959615211048 19.72342268529426 21 25.29165685002397 26.578662662648583 28.28447282577481 19.845207661552635 22 24.236616839146542 23.999259209769054 27.898839936563974 23.865284014520427 23 22.795123443549322 27.386733525329284 26.94729957345955 22.870843457661845 24 22.871077884950118 23.740920338091033 33.15493416695677 20.233067610002074 25 21.1032617040754 24.503160665914155 31.816823205488408 22.576754424522033 26 19.263945200277092 29.918431025045038 27.840584755427873 22.977039019249997 27 19.870877449618646 28.835494166863 29.505487356750276 21.78814102676808 28 18.231879063650524 27.0408360614809 35.05543619299461 19.671848681873964 29 19.933235108299545 25.363039959303425 33.62800843469383 21.075716497703198 30 21.923757213034627 25.85322741908449 31.143079178988753 21.07993618889213 31 27.806475584983993 24.70945667959533 25.78020331878712 21.703864416633554 32 29.87213163561091 25.180303888093793 26.075230061080028 18.87233441521527 33 27.494335650647077 25.841740481959064 26.292309730021813 20.371614137372045 34 20.86121552893243 26.733736313841877 30.43499155475694 21.970056602468755 35 21.863861040880604 26.64090310768535 29.700179219661887 21.795056631772162 36 28.369218290485886 25.412386903485114 26.005487942818494 20.212906863210506 37 23.408033588741866 29.252305885414287 27.011181009514228 20.32847951632962 38 22.97692180560586 30.148873049418444 24.165116516222955 22.709088628752742 39 23.06776237981206 27.880085753502048 26.37541420371497 22.67673766297092 40 24.751067523263977 24.8679295264686 26.061750492004272 24.31925245826315 41 20.415920894855844 24.28373672408963 27.033217174611995 28.26712520644253 42 23.69848899891343 25.998103483237863 25.159088218504987 25.14431929934372 43 23.189195715138027 25.503110264047173 26.455471122660562 24.852222898154235 44 22.098288329154666 27.69277835017107 27.459288771050105 22.749644549624154 45 20.253579997726057 30.844184386439323 24.45404814902074 24.448187466813888 46 22.451687466227817 29.20635813691257 26.807932550580617 21.534021846278996 47 22.445592356732693 25.632982981751006 28.253880064655046 23.667544596861255 48 23.686767634499724 23.613391893269945 29.849626615936604 22.850213856293728 49 22.779182387946687 23.263274738232628 30.507077945901212 23.45046492791947 50 20.467612111920275 29.511465252601266 26.72096002663094 23.299962608847522 51 20.157699236821962 29.736281022056094 25.99107066458964 24.114949076532305 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 414.0 1 842.0 2 1270.0 3 4371.0 4 7472.0 5 5359.5 6 3247.0 7 3221.0 8 3195.0 9 3335.0 10 3475.0 11 3515.5 12 3556.0 13 3583.5 14 3611.0 15 3404.5 16 3198.0 17 3053.0 18 2908.0 19 2880.5 20 2853.0 21 3270.0 22 3687.0 23 3726.5 24 3766.0 25 4304.0 26 5562.0 27 6282.0 28 7017.5 29 7753.0 30 9045.5 31 10338.0 32 12508.0 33 14678.0 34 16708.5 35 18739.0 36 20126.0 37 21513.0 38 25616.0 39 29719.0 40 38466.5 41 47214.0 42 56743.0 43 66272.0 44 69529.5 45 72787.0 46 69853.5 47 66920.0 48 66885.0 49 66850.0 50 64595.5 51 62341.0 52 58874.5 53 55408.0 54 51215.5 55 47023.0 56 44647.0 57 42271.0 58 41231.0 59 40191.0 60 38058.5 61 35926.0 62 32724.5 63 29523.0 64 25256.0 65 20989.0 66 18074.0 67 15159.0 68 12521.5 69 9884.0 70 8327.0 71 6770.0 72 5929.5 73 5089.0 74 4041.5 75 2251.0 76 1508.0 77 1154.5 78 801.0 79 531.5 80 262.0 81 265.0 82 268.0 83 183.5 84 99.0 85 65.0 86 31.0 87 31.5 88 32.0 89 20.0 90 8.0 91 7.0 92 6.0 93 3.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 853143.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.033362189670594 #Duplication Level Percentage of deduplicated Percentage of total 1 77.68645591983288 18.670667323532232 2 5.569087194662979 2.6768777923038383 3 2.0775281021756125 1.497899560164164 4 1.2373240164958346 1.1894822493768937 5 0.8473878364340123 1.018278939406998 6 0.6835723811804776 0.9857125571859591 7 0.5501368113803562 0.9255146069242217 8 0.5182202431897275 0.9963659838878317 9 0.45378491681224165 0.981537953576233 >10 9.653587249839065 59.38067208753074 >50 0.6890286719971567 9.998361531613813 >100 0.03290443408666911 1.1087782815205482 >500 4.911109565174495E-4 0.0867523990757508 >1k 4.911109565174495E-4 0.4830987339007456 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4093 0.4797554454528725 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04079034815968718 0.0 2 0.0 0.0 0.0 0.13819488643756087 0.0 3 0.0 0.0 0.0 0.20922635478460236 0.0 4 0.0 0.0 0.0 0.3213998122237421 0.0 5 0.0 0.0 0.0 0.5622738509253431 0.0 6 0.0 0.0 0.0 0.8616374980513232 0.0 7 1.1721364413703213E-4 0.0 0.0 1.0495309696029858 0.0 8 1.1721364413703213E-4 0.0 0.0 1.5195576825924846 0.0 9 1.1721364413703213E-4 0.0 0.0 1.772856367572611 0.0 10 1.1721364413703213E-4 0.0 0.0 2.145478542284236 0.0 11 1.1721364413703213E-4 0.0 0.0 2.459025040350797 0.0 12 1.1721364413703213E-4 0.0 0.0 2.7320156175459447 0.0 13 1.1721364413703213E-4 0.0 0.0 2.8622399761821877 0.0 14 1.1721364413703213E-4 0.0 0.0 2.914634475111441 0.0 15 1.1721364413703213E-4 0.0 0.0 2.994222539480486 0.0 16 1.1721364413703213E-4 0.0 0.0 3.1401535264310905 0.0 17 1.1721364413703213E-4 0.0 0.0 3.302259996272606 0.0 18 1.1721364413703213E-4 0.0 0.0 3.5233249291150486 0.0 19 1.1721364413703213E-4 0.0 0.0 3.644289409864466 0.0 20 1.1721364413703213E-4 0.0 0.0 3.7854146374054527 0.0 21 1.1721364413703213E-4 0.0 0.0 3.9486932436883384 0.0 22 1.1721364413703213E-4 0.0 0.0 4.106345595052646 0.0 23 1.1721364413703213E-4 0.0 0.0 4.27958736108718 0.0 24 1.1721364413703213E-4 0.0 0.0 4.4113354970972045 0.0 25 1.1721364413703213E-4 0.0 0.0 4.528197500301825 0.0 26 1.1721364413703213E-4 0.0 0.0 4.64529393079472 0.0 27 1.1721364413703213E-4 0.0 0.0 4.7724707346834 0.0 28 1.1721364413703213E-4 0.0 0.0 4.892849147212132 0.0 29 1.1721364413703213E-4 0.0 0.0 5.035029297550352 0.0 30 1.1721364413703213E-4 0.0 0.0 5.219875214354452 0.0 31 1.1721364413703213E-4 0.0 0.0 5.366743910458153 0.0 32 1.1721364413703213E-4 0.0 0.0 5.507517497066728 0.0 33 1.1721364413703213E-4 0.0 0.0 5.652159133931826 0.0 34 1.1721364413703213E-4 0.0 0.0 5.814265603773341 0.0 35 1.1721364413703213E-4 0.0 0.0 5.982701610398257 0.0 36 1.1721364413703213E-4 0.0 0.0 6.136134270573632 0.0 37 1.1721364413703213E-4 0.0 0.0 6.310430959405399 0.0 38 1.1721364413703213E-4 0.0 0.0 6.5137966319831495 0.0 39 1.1721364413703213E-4 0.0 0.0 6.817262756653926 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGACG 30 2.1648411E-6 45.000004 1 ACGATTG 30 2.1648411E-6 45.000004 1 ACCCACG 25 3.889957E-5 45.000004 22 CGATTCG 20 7.0322637E-4 45.0 10 TACGCGG 40 6.8121153E-9 45.0 2 TTACGCG 20 7.0322637E-4 45.0 1 TAGTACG 20 7.0322637E-4 45.0 1 CGTTTTT 2940 0.0 42.2449 1 AGTACGG 80 0.0 42.1875 2 GCGTTAG 70 0.0 41.785717 1 TACACGG 70 0.0 41.785717 2 CGGTCTA 65 0.0 41.53846 31 CGTTAGG 120 0.0 41.250004 2 ACGTAGG 105 0.0 40.714287 2 ACGTTAG 50 1.0804797E-9 40.500004 1 TATAGCG 50 1.0804797E-9 40.500004 1 CGGGATA 135 0.0 40.0 6 TATGACG 40 3.4568257E-7 39.375 1 AATGGGC 195 0.0 39.23077 4 GGCGATT 340 0.0 39.04412 8 >>END_MODULE