##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547074_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1062268 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.648111399383207 31.0 31.0 33.0 30.0 34.0 2 32.034263481531966 33.0 31.0 34.0 30.0 34.0 3 32.03400177732926 33.0 31.0 34.0 30.0 34.0 4 35.78783414354946 37.0 35.0 37.0 35.0 37.0 5 35.75834441026182 37.0 35.0 37.0 35.0 37.0 6 35.818747246457576 37.0 35.0 37.0 35.0 37.0 7 36.109747257754165 37.0 35.0 37.0 35.0 37.0 8 36.0452465856074 37.0 35.0 37.0 35.0 37.0 9 37.836939454073736 39.0 38.0 39.0 35.0 39.0 10 37.392743639081665 39.0 37.0 39.0 34.0 39.0 11 37.17585016210599 39.0 37.0 39.0 34.0 39.0 12 36.77781124913864 39.0 35.0 39.0 33.0 39.0 13 36.62218103152877 39.0 35.0 39.0 33.0 39.0 14 37.77875263116276 40.0 36.0 41.0 33.0 41.0 15 37.89688101307768 40.0 36.0 41.0 33.0 41.0 16 37.97948916845843 40.0 36.0 41.0 33.0 41.0 17 37.94995048330553 40.0 36.0 41.0 33.0 41.0 18 37.7623594045947 39.0 36.0 41.0 33.0 41.0 19 37.61857365561233 39.0 36.0 41.0 33.0 41.0 20 37.35744463732316 39.0 35.0 41.0 33.0 41.0 21 37.277911035633196 39.0 35.0 41.0 33.0 41.0 22 37.2226660315476 39.0 35.0 41.0 33.0 41.0 23 37.16522290043567 39.0 35.0 41.0 32.0 41.0 24 37.06603230070001 39.0 35.0 41.0 32.0 41.0 25 36.96050902408808 38.0 35.0 41.0 32.0 41.0 26 36.83605643773511 38.0 35.0 41.0 32.0 41.0 27 36.72633648005964 38.0 35.0 41.0 31.0 41.0 28 36.71992755123942 38.0 35.0 41.0 31.0 41.0 29 36.6917849356283 38.0 35.0 41.0 31.0 41.0 30 36.604860543666945 38.0 35.0 41.0 31.0 41.0 31 36.40833480816517 38.0 35.0 41.0 31.0 41.0 32 36.15956990138082 38.0 35.0 41.0 30.0 41.0 33 35.8574032165141 38.0 35.0 41.0 29.0 41.0 34 35.57152903033886 38.0 35.0 41.0 27.0 41.0 35 35.36279356998422 38.0 35.0 41.0 25.0 41.0 36 35.23749185704549 38.0 35.0 41.0 24.0 41.0 37 35.155539844935554 38.0 35.0 41.0 24.0 41.0 38 35.073090783116875 38.0 35.0 41.0 24.0 41.0 39 34.98881167464331 38.0 34.0 41.0 23.0 41.0 40 34.88041059318364 38.0 34.0 40.0 23.0 41.0 41 34.80814822624799 38.0 34.0 40.0 23.0 41.0 42 34.7193100046316 38.0 34.0 40.0 23.0 41.0 43 34.59234581103827 37.0 34.0 40.0 23.0 41.0 44 34.45719441798115 37.0 34.0 40.0 23.0 41.0 45 34.35746440634567 37.0 34.0 40.0 23.0 41.0 46 34.323941792466684 37.0 34.0 40.0 23.0 41.0 47 34.280211773300145 37.0 34.0 40.0 23.0 41.0 48 34.19375618958681 36.0 34.0 40.0 23.0 41.0 49 34.11098140958779 36.0 34.0 40.0 22.0 41.0 50 34.01342128351791 36.0 33.0 40.0 22.0 41.0 51 33.6499414460381 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 1.0 12 3.0 13 6.0 14 16.0 15 34.0 16 83.0 17 179.0 18 418.0 19 829.0 20 1469.0 21 2475.0 22 3745.0 23 5564.0 24 8527.0 25 13698.0 26 20007.0 27 23609.0 28 23630.0 29 22672.0 30 24000.0 31 27575.0 32 33020.0 33 42416.0 34 71807.0 35 112251.0 36 75873.0 37 98383.0 38 149374.0 39 300396.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.47943833382913 22.05413323191511 27.085537736239818 19.380890698015943 2 36.2219326949508 22.8389634254256 28.041793596342917 12.897310283280678 3 27.877804847740872 23.6516585268501 35.36150952490332 13.10902710050571 4 24.920547357164104 25.584033407765272 35.29627175063167 14.199147484438956 5 22.77946808150109 29.821193898338272 33.320687434809294 14.078650585351344 6 20.86272014218634 38.519187248415655 29.98292333008243 10.635169279315578 7 82.50912199181374 3.4319964453414773 12.12754220215614 1.9313393606886398 8 83.38893763155814 2.600473703434538 11.823005117352684 2.187583547654641 9 79.2764161209789 3.8220110179352105 13.597886785632252 3.3036860754536517 10 41.491412713175954 22.69897991843866 21.810880116881993 13.998727251503388 11 32.45489838722432 23.29995820263813 27.704402278897604 16.54074113123995 12 29.340147684011946 20.452936547086047 31.683624094861184 18.523291674040827 13 22.541298429398232 25.376176256839138 32.78617072151284 19.29635459224979 14 18.570454913449336 28.08754476271525 33.87864456050639 19.46335576332903 15 17.639898782604764 23.20356068336804 41.252960646465866 17.90357988756133 16 20.39137016270847 21.403449976842 38.40885727518856 19.79632258526097 17 20.97879254576058 21.86444475405453 32.30286519032862 24.85389750985627 18 22.681093659980345 22.98901972007064 34.03858536640471 20.291301253544304 19 25.53583464813023 23.48155079509126 29.997138198646667 20.985476358131848 20 26.47034458347611 22.858167618717687 30.323986037421818 20.347501760384386 21 24.10201568719005 24.381512010151866 31.76561846916221 19.750853833495878 22 23.56392172220193 21.75289098419608 31.793389238873804 22.889798054728185 23 21.930435633945482 24.8942827986911 30.872246928270453 22.30303463909296 24 20.773665402704403 22.997398020085328 35.455647727315515 20.77328884989475 25 20.964954230005986 24.17393727383297 33.31042637074636 21.550682125414678 26 20.544156465223466 26.45885972278182 31.077091656719396 21.919892155275317 27 20.403137438009995 25.985721117458116 32.56146283235493 21.049678612176965 28 19.83228337858243 24.33124221006375 35.42015762500612 20.416316786347704 29 20.44531135269066 23.45679244785685 34.80760034190995 21.29029585754254 30 22.068159824074527 24.207168059284477 32.763012723719434 20.96165939292156 31 25.280155290378698 23.682253442634064 29.441534528009882 21.596056738977357 32 26.66615204449348 24.50266787665636 29.093317317287166 19.737862761562997 33 24.60339575323741 24.943046387540623 29.716041526243846 20.737516332978117 34 22.022314519499787 24.709395369153548 31.12237213207966 22.145917979267 35 22.58027164519688 25.25925660944319 30.40372109486495 21.75675065049498 36 25.370339688289583 25.353677226462622 28.649549831116065 20.626433254131726 37 22.57980095418482 26.426005490139964 29.171263748884463 21.822929806790754 38 22.120500664615708 27.654791446226373 27.812567073469218 22.412140815688698 39 21.792240752804375 26.57229625668852 28.30858126197909 23.32688172852802 40 23.328952768981086 24.983808229185104 28.60690522542334 23.080333776410473 41 20.817439666826072 24.399586545015005 29.66643069357262 25.1165430945863 42 22.839151701830424 26.001818750070605 27.599061630398353 23.559967917700618 43 22.673562603787367 25.715073785523053 28.371371442988018 23.23999216770156 44 22.38324038754815 26.754830231165773 28.81391513252776 22.048014248758317 45 20.822993820768392 27.578821916879733 28.10307756611326 23.49510669623861 46 22.618209340768995 26.80999521777932 28.535454329792483 22.036341111659205 47 22.636566290239372 25.19825505428009 29.878429925404888 22.28674873007565 48 22.52567148779781 24.38480684723629 30.44702466797456 22.642496996991344 49 21.951616729488226 24.042991034277602 30.461521951146036 23.543870285088133 50 20.79842374993881 26.36858118666852 30.754950728064856 22.07804433532781 51 20.8060489443342 26.980667778752633 28.82587068423411 23.38741259267906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 578.0 1 1077.5 2 1577.0 3 14274.0 4 26971.0 5 18447.0 6 9923.0 7 9637.0 8 9351.0 9 9332.5 10 9314.0 11 9203.5 12 9093.0 13 8606.0 14 8119.0 15 7532.0 16 6945.0 17 6419.5 18 5894.0 19 5466.5 20 5039.0 21 4873.0 22 4707.0 23 4944.0 24 5181.0 25 5554.5 26 6567.5 27 7207.0 28 8687.5 29 10168.0 30 11822.5 31 13477.0 32 16016.5 33 18556.0 34 21052.5 35 23549.0 36 26643.5 37 29738.0 38 32350.5 39 34963.0 40 42358.0 41 49753.0 42 55763.5 43 61774.0 44 66724.5 45 71675.0 46 75238.0 47 78801.0 48 78299.0 49 77797.0 50 76404.5 51 75012.0 52 70414.0 53 65816.0 54 62404.0 55 58992.0 56 56128.0 57 53264.0 58 52580.5 59 51897.0 60 48792.0 61 45687.0 62 41862.0 63 38037.0 64 33497.0 65 28957.0 66 25194.5 67 21432.0 68 17802.0 69 14172.0 70 11797.5 71 9423.0 72 7818.0 73 6213.0 74 4966.0 75 2738.0 76 1757.0 77 1345.0 78 933.0 79 731.0 80 529.0 81 368.5 82 208.0 83 141.5 84 75.0 85 53.5 86 32.0 87 26.0 88 20.0 89 11.5 90 3.0 91 5.0 92 7.0 93 4.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1062268.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.630315290134533 #Duplication Level Percentage of deduplicated Percentage of total 1 74.30678974003077 22.017336081948454 2 5.806100911301176 3.440732012163826 3 2.6750156670915954 2.377846728659206 4 1.8159093433004754 2.15223865521177 5 1.4365726440281654 2.1283050189868375 6 1.237507640695503 2.2000644940654968 7 1.0539051418101393 2.1859279146409865 8 0.9493711023650742 2.250413207233579 9 0.8757858745443381 2.3354830430455453 >10 9.749595226472003 54.467466807310586 >50 0.07232531052707686 1.3272498546164575 >100 0.019201270757977354 1.2089020530658363 >500 0.0016001058964295414 0.3224939903043302 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.2002117928590825E-4 1.5855401387470462 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16721 1.574084882534351 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.039538045013122865 0.0 2 0.0 0.0 0.0 0.15090353846675228 0.0 3 0.0 0.0 0.0 0.2578445364070084 0.0 4 0.0 0.0 0.0 0.39876942541806776 0.0 5 0.0 0.0 0.0 0.7626135777412103 0.0 6 0.0 0.0 0.0 1.332149702335004 0.0 7 0.0 0.0 0.0 1.7194342670587837 0.0 8 0.0 0.0 0.0 2.4364849548324905 0.0 9 0.0 0.0 0.0 2.9032221623921646 0.0 10 0.0 0.0 0.0 3.4634386049471506 0.0 11 0.0 0.0 0.0 3.808078563978205 0.0 12 0.0 0.0 0.0 4.113368754400961 0.0 13 0.0 0.0 0.0 4.274909909740291 0.0 14 0.0 0.0 0.0 4.360293259328154 0.0 15 0.0 0.0 0.0 4.4366393414844465 0.0 16 0.0 0.0 0.0 4.5654204023843326 0.0 17 0.0 0.0 0.0 4.703521145323026 0.0 18 0.0 0.0 0.0 4.914296580523936 0.0 19 0.0 0.0 0.0 5.026980008811336 0.0 20 0.0 0.0 0.0 5.151430712400261 0.0 21 0.0 0.0 0.0 5.2923556014113196 0.0 22 0.0 0.0 0.0 5.436575327506806 0.0 23 0.0 0.0 0.0 5.588231971592856 0.0 24 0.0 0.0 0.0 5.717860276314452 0.0 25 0.0 0.0 0.0 5.83948683383101 0.0 26 0.0 0.0 0.0 5.952170262118411 0.0 27 0.0 0.0 0.0 6.0734202668253205 0.0 28 0.0 0.0 0.0 6.19890649064078 0.0 29 0.0 0.0 0.0 6.329852730196146 0.0 30 0.0 0.0 0.0 6.5079622091600235 0.0 31 0.0 0.0 0.0 6.653123317279632 0.0 32 0.0 0.0 0.0 6.807509969235635 0.0 33 0.0 0.0 0.0 6.952388662748007 0.0 34 0.0 0.0 0.0 7.099526673118271 0.0 35 0.0 0.0 0.0 7.274435453200134 0.0 36 0.0 0.0 0.0 7.430422454597145 0.0 37 0.0 0.0 0.0 7.583208757112141 0.0 38 0.0 0.0 0.0 7.752657521454096 0.0 39 0.0 0.0 0.0 7.9751060937541185 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTAAC 20 7.0330466E-4 45.0 18 ACCGTAA 20 7.0330466E-4 45.0 17 CGTTTTT 8865 0.0 44.162434 1 TATGCGG 120 0.0 41.250004 2 TCTTGCG 50 1.0822987E-9 40.5 1 GCGATCG 50 1.0822987E-9 40.5 9 TTATGCG 40 3.4578989E-7 39.375 1 ATAGGGC 565 0.0 39.02655 4 ATAGGGT 325 0.0 38.76923 4 CGATTCG 35 6.247843E-6 38.571426 10 TATGGGA 670 0.0 37.94776 4 GTTTTTT 10780 0.0 37.820038 2 GGGCGAT 1205 0.0 37.717842 7 AGGGCGA 685 0.0 37.445255 6 CGTAAGG 175 0.0 37.285713 2 TAGGGAC 575 0.0 36.782608 5 TAGCGGG 700 0.0 36.642857 3 GTAGGGA 1105 0.0 36.447964 4 TCGTAAG 75 1.8189894E-12 36.000004 1 TACGATG 25 0.002107037 36.0 1 >>END_MODULE