##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547073_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 910271 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.677353227775026 31.0 31.0 33.0 30.0 34.0 2 32.06014252898313 33.0 31.0 34.0 30.0 34.0 3 32.14948185760065 33.0 31.0 34.0 30.0 34.0 4 35.81835848884563 37.0 35.0 37.0 35.0 37.0 5 35.75126857825856 37.0 35.0 37.0 35.0 37.0 6 35.80558427105774 37.0 35.0 37.0 35.0 37.0 7 36.115609527272646 37.0 35.0 37.0 35.0 37.0 8 36.06245942142505 37.0 35.0 37.0 35.0 37.0 9 37.84752342983573 39.0 38.0 39.0 35.0 39.0 10 37.430965064250096 39.0 37.0 39.0 35.0 39.0 11 37.13768756776828 39.0 37.0 39.0 33.0 39.0 12 36.280311028254225 38.0 35.0 39.0 33.0 39.0 13 35.88105959653773 38.0 35.0 39.0 31.0 39.0 14 36.74631730550572 39.0 35.0 41.0 31.0 41.0 15 37.018195680187546 39.0 35.0 41.0 32.0 41.0 16 37.225591060244696 39.0 35.0 41.0 33.0 41.0 17 37.20348116110477 39.0 35.0 41.0 33.0 41.0 18 37.13663733108052 39.0 35.0 41.0 32.0 41.0 19 37.11813734591127 38.0 35.0 41.0 32.0 41.0 20 36.922164937694376 38.0 35.0 41.0 32.0 41.0 21 36.835188641624306 38.0 35.0 41.0 32.0 41.0 22 36.79800960373339 38.0 35.0 41.0 32.0 41.0 23 36.77070564699963 38.0 35.0 41.0 32.0 41.0 24 36.69931042513713 38.0 35.0 41.0 32.0 41.0 25 36.598162525226 38.0 35.0 41.0 32.0 41.0 26 36.45306727337243 38.0 35.0 41.0 31.0 41.0 27 36.38621245760878 38.0 35.0 40.0 31.0 41.0 28 36.42498772343621 38.0 35.0 40.0 31.0 41.0 29 36.43432889765795 38.0 35.0 40.0 31.0 41.0 30 36.391784424638374 38.0 35.0 40.0 31.0 41.0 31 36.214140624055915 38.0 35.0 40.0 31.0 41.0 32 36.11714203792057 38.0 35.0 40.0 31.0 41.0 33 36.00224218941392 38.0 35.0 41.0 30.0 41.0 34 35.85621314971036 38.0 35.0 41.0 30.0 41.0 35 35.77278744461814 38.0 35.0 41.0 30.0 41.0 36 35.6730347336123 37.0 35.0 40.0 30.0 41.0 37 35.58405793439536 37.0 35.0 40.0 29.0 41.0 38 35.49749689927505 37.0 35.0 40.0 29.0 41.0 39 35.44449949520527 37.0 35.0 40.0 29.0 41.0 40 35.305332148338245 37.0 34.0 40.0 28.0 41.0 41 35.283346388053666 37.0 34.0 40.0 28.0 41.0 42 35.20747777310274 36.0 34.0 40.0 28.0 41.0 43 35.092862455246845 36.0 34.0 40.0 28.0 41.0 44 34.906976054383804 36.0 34.0 40.0 27.0 41.0 45 34.83228730784568 36.0 34.0 40.0 27.0 41.0 46 34.8406562441295 35.0 34.0 40.0 27.0 41.0 47 34.794219523636364 35.0 34.0 40.0 27.0 41.0 48 34.75464120025794 35.0 34.0 40.0 27.0 41.0 49 34.69480297625652 36.0 34.0 40.0 27.0 41.0 50 34.57128042088565 35.0 34.0 40.0 27.0 41.0 51 34.21008908336089 35.0 34.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 4.0 13 5.0 14 8.0 15 29.0 16 60.0 17 166.0 18 379.0 19 693.0 20 1203.0 21 1833.0 22 2869.0 23 4255.0 24 6076.0 25 8959.0 26 12107.0 27 14144.0 28 15469.0 29 17368.0 30 20337.0 31 24789.0 32 31701.0 33 42459.0 34 81601.0 35 142604.0 36 56833.0 37 76228.0 38 115315.0 39 232592.0 40 183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.02352596095009 23.13300105133526 28.305416738531715 13.538056249182937 2 32.27829953936794 24.298917575095768 29.83518095160672 13.587601933929566 3 29.087271812460248 25.202494641705602 31.603775139491425 14.106458406342725 4 26.976911271478492 27.60342799012602 30.4212701492193 14.998390589176191 5 24.70473078896285 31.545550720609576 28.891396078750176 14.858322411677403 6 22.075074345991467 39.940413349431104 26.643384222940202 11.341128081637226 7 86.5523563861751 4.451421609608567 6.979679677810234 2.016542326406092 8 87.67443980968305 3.1690562480843614 6.8076429986234865 2.3488609436091012 9 83.82064242406932 4.443731592020398 8.437267582950572 3.2983584009597138 10 51.82961997031653 23.345135679374604 13.180031001756621 11.645213348552245 11 45.5342420004592 20.89586507754284 19.566261036548457 14.003631885449497 12 39.16822572618484 21.02297008253586 23.659657398730708 16.149146792548592 13 24.397459657618445 33.4346584698403 25.889652641905542 16.278229230635713 14 17.545983558742396 36.0249859657179 30.34041510714941 16.088615368390293 15 17.175434568386777 22.475174975364478 44.64285910459632 15.70653135165242 16 21.786259256858674 19.799158712075855 40.070374646671155 18.344207384394316 17 21.81657989763488 19.13111589845222 28.142937652633115 30.90936655127978 18 25.09615268420064 22.264029063872186 31.901488677547675 20.7383295743795 19 29.803761736889346 23.843998106058525 25.09109924407127 21.261140912980856 20 30.50904620711854 25.05012243606574 24.34417882147185 20.09665253534387 21 24.646066940504532 26.719735111851307 28.71166938197526 19.922528565668905 22 24.07535777806829 23.18792974839361 28.311788467390482 24.42492400614762 23 21.783732536793988 27.97595441357574 27.267264364128923 22.97304868550135 24 22.45529078702936 23.91101111646971 34.002181767847155 19.631516328653774 25 21.171497279381633 24.30715687965452 31.829861656583592 22.691484184380258 26 19.113099285817082 30.476088988883532 27.39316093778666 23.017650787512732 27 20.04479984532079 28.160295120903555 29.838256958641985 21.95664807513367 28 17.316161890250267 26.767962507868535 35.036159561273514 20.879716040607686 29 19.074429483088004 26.098930977697847 33.489916739080996 21.33672280013315 30 22.49681688200547 26.261959350567025 30.3021847339968 20.939039033430703 31 28.9816988567141 24.166319700396915 25.57150562854359 21.280475814345397 32 30.40556054186061 25.93996732841099 25.222708402223077 18.431763727505327 33 28.167216136732907 25.351680982916076 25.224136548346593 21.256966332004428 34 20.92223085213085 26.82333063450335 30.182550031803718 22.071888481562084 35 20.784030250332044 27.78304482950682 29.962176099205625 21.470748820955517 36 29.578004791979534 25.604682561566833 25.955567078375562 18.861745568078078 37 23.551008435949296 29.427500162039657 26.470578541994637 20.550912860016414 38 23.642409787854383 29.72916856628411 24.07942250165061 22.5489991442109 39 22.699833346333126 27.866866021217856 25.9222802879582 23.511020344490817 40 25.73024956304221 24.513688780593913 24.9557549345195 24.800306721844372 41 20.01425948975635 23.652516668113122 26.526276240811804 29.80694760131873 42 23.039072979365486 24.94839448911368 25.98786515224587 26.024667379274963 43 22.69038561043909 25.520751512461676 26.081134079850944 25.70772879724829 44 22.785082684167683 27.91641170596449 27.094678397971595 22.203827211896236 45 20.077097919191097 30.82466650041581 23.932762880504814 25.165472699888277 46 23.13377005309408 28.568964627017667 26.328423074007627 21.968842245880623 47 21.84063866694644 26.34248482045457 28.4316428843718 23.385233628227198 48 24.38339791117151 23.590996527407775 29.06815662588394 22.957448935536778 49 23.004797472401076 23.236267001804958 29.84748497974779 23.91145054604618 50 20.36613272311213 29.279961681740936 27.003167188672382 23.350738406474555 51 19.955815356086266 31.04460100343744 24.224763834066998 24.7748198064093 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 393.0 1 812.0 2 1231.0 3 4454.0 4 7677.0 5 5416.0 6 3155.0 7 3197.0 8 3239.0 9 3364.0 10 3489.0 11 3504.0 12 3519.0 13 3383.5 14 3248.0 15 3211.0 16 3174.0 17 3035.0 18 2896.0 19 2693.0 20 2490.0 21 2600.5 22 2711.0 23 3270.5 24 3830.0 25 4343.5 26 5531.5 27 6206.0 28 7071.0 29 7936.0 30 8994.5 31 10053.0 32 12573.0 33 15093.0 34 17350.5 35 19608.0 36 21005.0 37 22402.0 38 26370.0 39 30338.0 40 40848.0 41 51358.0 42 61148.0 43 70938.0 44 72331.0 45 73724.0 46 73466.5 47 73209.0 48 72727.0 49 72245.0 50 71034.5 51 69824.0 52 65820.5 53 61817.0 54 57440.0 55 53063.0 56 51356.0 57 49649.0 58 46157.0 59 42665.0 60 40204.0 61 37743.0 62 34845.5 63 31948.0 64 27744.5 65 23541.0 66 19527.5 67 15514.0 68 12582.5 69 9651.0 70 7937.5 71 6224.0 72 5244.0 73 4264.0 74 3429.5 75 1900.0 76 1205.0 77 1037.5 78 870.0 79 607.5 80 345.0 81 299.5 82 254.0 83 144.0 84 34.0 85 33.5 86 33.0 87 19.5 88 6.0 89 4.5 90 3.0 91 3.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 910271.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.662332895827312 #Duplication Level Percentage of deduplicated Percentage of total 1 77.95477537909346 18.445918458395525 2 6.246254365598386 2.956019003016073 3 2.156046007017865 1.5305123507032785 4 1.3213509254636335 1.2506498188212 5 0.8819395182427591 1.0434373237322867 6 0.664768013708444 0.9437977223320259 7 0.540817204691974 0.8957897713248588 8 0.4590860730339879 0.8690437990374651 9 0.3730709910404088 0.7944956985396925 >10 8.091897397912623 50.58839884289657 >50 1.2571642398170113 18.263533498144973 >100 0.05189484217805497 1.7798681368354177 >500 0.0 0.0 >1k 9.35042201406396E-4 0.6385355762206496 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4495 0.4938089865545535 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1277 0.1402878922870222 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.034165649570292805 0.0 2 0.0 0.0 0.0 0.13512459476353744 0.0 3 0.0 0.0 0.0 0.20752061748644085 0.0 4 0.0 0.0 0.0 0.33484533726769283 0.0 5 0.0 0.0 0.0 0.6271758630122238 0.0 6 0.0 0.0 0.0 0.9771815206680209 0.0 7 0.0 0.0 0.0 1.213594632807153 0.0 8 0.0 0.0 0.0 1.8217651666371883 0.0 9 0.0 0.0 0.0 2.1572696482695815 0.0 10 0.0 0.0 0.0 2.6217467105949765 0.0 11 0.0 0.0 0.0 2.989768980885912 0.0 12 0.0 0.0 0.0 3.304949844606716 0.0 13 0.0 0.0 0.0 3.443809590770221 0.0 14 0.0 0.0 0.0 3.5042311575344045 0.0 15 0.0 0.0 0.0 3.5811313334160926 0.0 16 0.0 0.0 0.0 3.7283402415324667 0.0 17 0.0 0.0 0.0 3.8837884542075933 0.0 18 0.0 0.0 0.0 4.140525184258315 0.0 19 0.0 0.0 0.0 4.273452631139518 0.0 20 0.0 0.0 0.0 4.429999417755811 0.0 21 1.0985739411669711E-4 0.0 0.0 4.6013769525778585 0.0 22 1.0985739411669711E-4 0.0 0.0 4.780005075411609 0.0 23 1.0985739411669711E-4 0.0 0.0 4.96555421407471 0.0 24 1.0985739411669711E-4 0.0 0.0 5.110236402126399 0.0 25 1.0985739411669711E-4 0.0 0.0 5.238220266272352 0.0 26 1.0985739411669711E-4 0.0 0.0 5.3620295494418695 0.0 27 1.0985739411669711E-4 0.0 0.0 5.501987869546542 0.0 28 1.0985739411669711E-4 0.0 0.0 5.635244888610095 0.0 29 1.0985739411669711E-4 0.0 0.0 5.8004704093616075 0.0 30 1.0985739411669711E-4 0.0 0.0 6.007661454665699 0.0 31 1.0985739411669711E-4 0.0 0.0 6.16926168141136 0.0 32 1.0985739411669711E-4 0.0 0.0 6.328994332457038 0.0 33 1.0985739411669711E-4 0.0 0.0 6.484772117314514 0.0 34 1.0985739411669711E-4 0.0 0.0 6.658127085230662 0.0 35 1.0985739411669711E-4 0.0 0.0 6.854332391123084 0.0 36 1.0985739411669711E-4 0.0 0.0 7.017141049204028 0.0 37 1.0985739411669711E-4 0.0 0.0 7.204887335749464 0.0 38 1.0985739411669711E-4 0.0 0.0 7.490736275241109 0.0 39 1.0985739411669711E-4 0.0 0.0 8.037386668365794 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAA 70 0.0 45.000004 9 ATGCGCG 35 1.2115561E-7 45.000004 1 ATAAGTC 20 7.032514E-4 45.0 29 GACGATA 20 7.032514E-4 45.0 1 CGTTTTT 2625 0.0 43.199997 1 GGCGATA 295 0.0 41.949154 8 CGCAGTA 220 0.0 41.93182 37 CTCGCGC 215 0.0 41.860466 33 TATAGCG 70 0.0 41.785717 1 AATACGG 70 0.0 41.785717 2 GGGCGAT 1205 0.0 41.07884 7 TAACGGG 240 0.0 40.312496 3 ATTGCGG 135 0.0 40.000004 2 TAAACGG 45 1.927583E-8 40.0 2 ATCCGCG 45 1.927583E-8 40.0 1 AGGGCGA 660 0.0 39.886364 6 CGTTAGG 130 0.0 39.807693 2 GCGAGAC 255 0.0 39.705883 21 TCGATAG 40 3.4571713E-7 39.375 1 TAACACG 40 3.4571713E-7 39.375 1 >>END_MODULE