SRR1547072_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547072_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1138103
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5369	0.47174992070137767	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1366	0.12002428602683587	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACCGA	20	7.033259E-4	45.0	35
CGACGAA	20	7.033259E-4	45.0	35
TCGGACG	25	3.8907812E-5	45.0	1
ATCGGTT	20	7.033259E-4	45.0	33
CATACGA	30	2.1654832E-6	44.999996	18
ATACGAA	30	2.1654832E-6	44.999996	19
CGTTTTT	3815	0.0	42.64089	1
TAAACGG	60	3.6379788E-12	41.249996	2
GACCGAT	275	0.0	40.909092	9
ATATACG	40	3.45819E-7	39.375	1
CGGGATC	175	0.0	38.571426	6
TATAGCG	35	6.248236E-6	38.571426	1
GGGCGAT	1405	0.0	38.27402	7
CGTAAGG	160	0.0	37.96875	2
TAGGGTG	335	0.0	37.61194	5
TTTACGG	90	0.0	37.500004	2
TCGTTAG	30	1.139915E-4	37.499996	1
CGACTTA	30	1.139915E-4	37.499996	15
TAGATAC	185	0.0	36.486485	20
AGTGCGG	155	0.0	36.29032	2