##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547072_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1138103 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.686616237721893 31.0 31.0 33.0 30.0 34.0 2 32.076111740325786 33.0 31.0 34.0 30.0 34.0 3 32.16725902664346 33.0 31.0 34.0 30.0 34.0 4 35.84716936867753 37.0 35.0 37.0 35.0 37.0 5 35.79036343810709 37.0 35.0 37.0 35.0 37.0 6 35.84046786626518 37.0 35.0 37.0 35.0 37.0 7 36.128771297501196 37.0 35.0 37.0 35.0 37.0 8 36.05968001138737 37.0 35.0 37.0 35.0 37.0 9 37.81201789293236 39.0 38.0 39.0 35.0 39.0 10 37.42376920190879 39.0 37.0 39.0 35.0 39.0 11 37.158506743238526 39.0 37.0 39.0 34.0 39.0 12 36.51272687972881 39.0 35.0 39.0 33.0 39.0 13 36.248522321793374 39.0 35.0 39.0 32.0 39.0 14 37.313871415856035 40.0 35.0 41.0 32.0 41.0 15 37.48792508235195 40.0 35.0 41.0 33.0 41.0 16 37.61188134993054 40.0 35.0 41.0 33.0 41.0 17 37.588458162398304 39.0 35.0 41.0 33.0 41.0 18 37.503906061226445 39.0 35.0 41.0 33.0 41.0 19 37.441552302383876 39.0 35.0 41.0 33.0 41.0 20 37.28327313081505 39.0 35.0 41.0 33.0 41.0 21 37.19829224595665 39.0 35.0 41.0 32.0 41.0 22 37.103016159345856 39.0 35.0 41.0 32.0 41.0 23 37.05763010904988 39.0 35.0 41.0 32.0 41.0 24 36.970778567493454 38.0 35.0 41.0 32.0 41.0 25 36.865905809931085 38.0 35.0 41.0 32.0 41.0 26 36.73138020021035 38.0 35.0 41.0 32.0 41.0 27 36.644388952493756 38.0 35.0 41.0 31.0 41.0 28 36.662606108585955 38.0 35.0 41.0 31.0 41.0 29 36.68447583390959 38.0 35.0 41.0 31.0 41.0 30 36.63656452886953 38.0 35.0 41.0 31.0 41.0 31 36.511805170533776 38.0 35.0 41.0 31.0 41.0 32 36.39598876375864 38.0 35.0 41.0 31.0 41.0 33 36.289946516264344 38.0 35.0 41.0 30.0 41.0 34 36.14081590154846 38.0 35.0 41.0 30.0 41.0 35 36.05298993149126 38.0 35.0 41.0 30.0 41.0 36 35.95619465022059 38.0 35.0 41.0 30.0 41.0 37 35.88115750507643 38.0 35.0 41.0 30.0 41.0 38 35.81704204276766 38.0 35.0 41.0 30.0 41.0 39 35.74910003751857 38.0 35.0 41.0 29.0 41.0 40 35.625521591630985 38.0 35.0 40.0 29.0 41.0 41 35.60758384785911 38.0 35.0 40.0 29.0 41.0 42 35.52580302485803 38.0 35.0 40.0 29.0 41.0 43 35.405346440524276 37.0 35.0 40.0 28.0 41.0 44 35.20966555751105 37.0 34.0 40.0 28.0 41.0 45 35.14009891899064 37.0 34.0 40.0 27.0 41.0 46 35.10046103032854 37.0 34.0 40.0 27.0 41.0 47 35.07432016258634 37.0 34.0 40.0 27.0 41.0 48 35.009365584661495 36.0 34.0 40.0 27.0 41.0 49 34.94757592239015 36.0 34.0 40.0 27.0 41.0 50 34.84911734702395 36.0 34.0 40.0 27.0 41.0 51 34.47935116593138 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 3.0 12 7.0 13 4.0 14 16.0 15 28.0 16 74.0 17 169.0 18 377.0 19 752.0 20 1353.0 21 2177.0 22 3336.0 23 4887.0 24 7197.0 25 10373.0 26 14527.0 27 17263.0 28 18463.0 29 20062.0 30 23810.0 31 28882.0 32 36316.0 33 48345.0 34 90172.0 35 156882.0 36 75746.0 37 99907.0 38 154491.0 39 322249.0 40 233.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.923025420370564 23.35623401396886 27.880692696530986 13.840047869129595 2 33.21491991498134 24.349114271731118 29.62860127774024 12.807364535547311 3 29.818654374867652 24.88149139401267 31.465869082148103 13.833985148971578 4 27.093593462103165 27.564464727709183 30.14428395320986 15.197657856977795 5 24.552083598760394 31.29031379409421 28.887719301328612 15.269883305816784 6 23.112231493986044 39.68656615438146 26.273544661599168 10.927657690033328 7 86.23516500703363 4.359710852181217 7.240469447844351 2.164654692940797 8 86.48022191313089 3.6991379514859375 7.285456588727031 2.535183546656146 9 81.89241219819296 5.3464405242759225 8.994177152683017 3.7669701248481027 10 48.40959034463489 25.213710885570112 14.423914179999525 11.952784589795476 11 40.39924330223187 22.75136784631971 22.12049348784776 14.728895363600659 12 35.557062937185826 22.196848615634966 25.79309605545368 16.45299239172553 13 24.284708853240875 31.597755211962365 26.708478933804763 17.409057000992 14 18.33542306803514 34.24189199044375 29.58572290908644 17.836962032434673 15 17.8172801582985 23.485923506044706 41.75184495603649 16.9449513796203 16 20.68969153055567 21.261959594166786 38.66996220904435 19.378386666233197 17 21.715082026846428 20.882380592969177 28.271167020911115 29.131370359273284 18 24.334177135109915 23.278912365576755 31.323439091189464 21.063471408123867 19 28.08884608862291 24.50771151644447 26.37125110820374 21.03219128672888 20 30.09850602274135 24.44198811531118 24.770868717506236 20.688637144441234 21 25.901434228712162 26.061964514635317 27.61771122648829 20.41889003016423 22 24.689505255675453 23.743193717967532 27.4775657387776 24.08973528757942 23 22.706732167475177 27.35534481501235 26.995447687950914 22.94247532956156 24 22.22619569582015 24.145793482663695 33.30287329002735 20.325137531488803 25 20.92007489656033 25.373450381907436 31.08611434993142 22.62036037160081 26 20.032193922694166 29.97066170636577 27.36140753517037 22.6357368357697 27 20.758226627994127 28.197711454938613 29.589325394977433 21.454736522089828 28 19.06953940021246 26.121537330101052 34.74017729502514 20.068745974661343 29 20.102486330323355 24.758303949642517 33.30190676942245 21.837302950611676 30 21.743638317445786 27.072769336343022 30.04763189271973 21.135960453491467 31 27.44971237225453 25.28479408278513 25.56077964823922 21.704713896721124 32 28.362371419809985 26.47695331617613 25.622285504914753 19.538389759099132 33 26.63695640904206 26.355171719958566 26.396380643931174 20.6114912270682 34 21.900829714006555 26.689148521706734 28.853451752609388 22.556570011677326 35 22.363705218244746 26.557086660873402 29.383017178585767 21.696190942296084 36 27.69916255382861 25.501734025830704 26.596450409145746 20.202653011194947 37 23.045717303266926 28.65812672490978 27.104488785285692 21.1916671865376 38 23.429074521374606 29.341368927065474 24.97744053042651 22.25211602113341 39 23.519751727216253 27.96337414100481 26.08498527813388 22.431888853645056 40 24.131383539099712 25.210899189264946 26.521237532982518 24.136479738652827 41 20.221983423292972 25.30482741895944 26.743625137619354 27.729564020128233 42 23.038688062504008 26.323100808977745 25.51948285875707 25.11872826976117 43 22.915939945681544 26.733081276474973 26.108445369180117 24.242533408663363 44 21.70761345853583 28.17952329446456 27.54750668436864 22.565356562630974 45 21.37346092576858 30.365177844184576 24.962503393805306 23.298857836241535 46 23.180502994895892 28.99869343987319 26.657429072764067 21.16337449246685 47 22.863396370978727 26.355347450977636 27.71032147353974 23.070934704503898 48 23.11706409701055 24.467117651038613 29.220114523905128 23.195703728045704 49 22.173564255607797 23.550680386573095 30.083744617139224 24.192010740679887 50 21.027358683704374 28.57307291167847 27.69714164710927 22.702426757507887 51 20.676863166163344 29.791416066911342 25.753292979633652 23.77842778729166 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 435.0 1 995.0 2 1555.0 3 5822.5 4 10090.0 5 7232.5 6 4375.0 7 4367.5 8 4360.0 9 4507.5 10 4655.0 11 4553.0 12 4451.0 13 4344.0 14 4237.0 15 4162.5 16 4088.0 17 3989.5 18 3891.0 19 3803.0 20 3715.0 21 3841.0 22 3967.0 23 4522.5 24 5078.0 25 5611.0 26 7308.5 27 8473.0 28 9778.5 29 11084.0 30 13338.0 31 15592.0 32 17625.0 33 19658.0 34 22403.5 35 25149.0 36 27983.5 37 30818.0 38 35717.5 39 40617.0 40 53530.5 41 66444.0 42 76047.5 43 85651.0 44 88481.0 45 91311.0 46 91883.5 47 92456.0 48 90731.5 49 89007.0 50 86821.5 51 84636.0 52 80245.0 53 75854.0 54 69801.5 55 63749.0 56 60043.5 57 56338.0 58 54437.0 59 52536.0 60 49578.5 61 46621.0 62 42284.0 63 37947.0 64 33602.0 65 29257.0 66 24806.5 67 20356.0 68 16483.0 69 12610.0 70 10319.0 71 8028.0 72 6782.5 73 5537.0 74 4578.0 75 2811.5 76 2004.0 77 1373.0 78 742.0 79 666.0 80 590.0 81 375.0 82 160.0 83 132.0 84 104.0 85 90.5 86 77.0 87 47.0 88 17.0 89 14.5 90 12.0 91 8.5 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1138103.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.12846806461348 #Duplication Level Percentage of deduplicated Percentage of total 1 78.58925168546277 18.17648997829097 2 5.751971401563833 2.660685737392783 3 2.0043495734306593 1.3907260529823793 4 1.1256405276537218 1.0413736398429507 5 0.7859731587628325 0.9089177551044775 6 0.616968284385494 0.8561718757373559 7 0.5229445365888281 0.8466434209841164 8 0.4584921541540983 0.8483376916183123 9 0.389233020856927 0.8102127143324223 >10 8.405885319612947 51.56625372855355 >50 1.3010740643664904 18.632519411666266 >100 0.047450935492149654 1.665583860435648 >500 0.0 0.0 >1k 3.8266883461410956E-4 0.12089842995669764 >5k 3.8266883461410956E-4 0.47518570310213 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5369 0.47174992070137767 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1366 0.12002428602683587 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04138465499168353 0.0 2 0.0 0.0 0.0 0.13434636408128262 0.0 3 0.0 0.0 0.0 0.210262164320804 0.0 4 0.0 0.0 0.0 0.327211157513863 0.0 5 0.0 0.0 0.0 0.6296442413384378 0.0 6 0.0 0.0 0.0 0.9782945831792026 0.0 7 0.0 0.0 0.0 1.2028788255544534 0.0 8 0.0 0.0 0.0 1.7088084294655228 0.0 9 0.0 0.0 0.0 1.975831712946895 0.0 10 0.0 0.0 0.0 2.3722808919755067 0.0 11 0.0 0.0 0.0 2.693956522388571 0.0 12 0.0 0.0 0.0 2.977498521662802 0.0 13 0.0 0.0 0.0 3.104288451923947 0.0 14 0.0 0.0 0.0 3.1562169680600087 0.0 15 0.0 0.0 0.0 3.230551189127873 0.0 16 0.0 0.0 0.0 3.3793953622826756 0.0 17 0.0 0.0 0.0 3.5448461167398735 0.0 18 0.0 0.0 0.0 3.779622758221356 0.0 19 0.0 0.0 0.0 3.9077306711255484 0.0 20 0.0 0.0 0.0 4.045064462531071 0.0 21 1.7573101907296615E-4 0.0 0.0 4.202958783168132 0.0 22 1.7573101907296615E-4 0.0 0.0 4.369288192720694 0.0 23 1.7573101907296615E-4 0.0 0.0 4.547479446060682 0.0 24 1.7573101907296615E-4 0.0 0.0 4.686482682147398 0.0 25 1.7573101907296615E-4 0.0 0.0 4.809933723046156 0.0 26 1.7573101907296615E-4 0.0 0.0 4.932242512320941 0.0 27 1.7573101907296615E-4 0.0 0.0 5.051915336309631 0.0 28 1.7573101907296615E-4 0.0 0.0 5.1769479563800465 0.0 29 1.7573101907296615E-4 0.0 0.0 5.319026485300539 0.0 30 1.7573101907296615E-4 0.0 0.0 5.5007323590219865 0.0 31 1.7573101907296615E-4 0.0 0.0 5.65704510048739 0.0 32 1.7573101907296615E-4 0.0 0.0 5.802989711827489 0.0 33 1.7573101907296615E-4 0.0 0.0 5.953503329663484 0.0 34 1.7573101907296615E-4 0.0 0.0 6.10849808848584 0.0 35 1.7573101907296615E-4 0.0 0.0 6.281768873291784 0.0 36 1.7573101907296615E-4 0.0 0.0 6.444232200424742 0.0 37 1.7573101907296615E-4 0.0 0.0 6.605729006952798 0.0 38 1.7573101907296615E-4 0.0 0.0 6.7826022776497386 0.0 39 1.7573101907296615E-4 0.0 0.0 6.987328914869744 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGA 20 7.033259E-4 45.0 35 CGACGAA 20 7.033259E-4 45.0 35 TCGGACG 25 3.8907812E-5 45.0 1 ATCGGTT 20 7.033259E-4 45.0 33 CATACGA 30 2.1654832E-6 44.999996 18 ATACGAA 30 2.1654832E-6 44.999996 19 CGTTTTT 3815 0.0 42.64089 1 TAAACGG 60 3.6379788E-12 41.249996 2 GACCGAT 275 0.0 40.909092 9 ATATACG 40 3.45819E-7 39.375 1 CGGGATC 175 0.0 38.571426 6 TATAGCG 35 6.248236E-6 38.571426 1 GGGCGAT 1405 0.0 38.27402 7 CGTAAGG 160 0.0 37.96875 2 TAGGGTG 335 0.0 37.61194 5 TTTACGG 90 0.0 37.500004 2 TCGTTAG 30 1.139915E-4 37.499996 1 CGACTTA 30 1.139915E-4 37.499996 15 TAGATAC 185 0.0 36.486485 20 AGTGCGG 155 0.0 36.29032 2 >>END_MODULE