##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547071_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 869691 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.720214420984004 31.0 31.0 33.0 30.0 34.0 2 32.10724843651366 33.0 31.0 34.0 30.0 34.0 3 32.13808122655058 33.0 31.0 34.0 30.0 34.0 4 35.85074698944798 37.0 35.0 37.0 35.0 37.0 5 35.815081448468476 37.0 35.0 37.0 35.0 37.0 6 35.87023322076462 37.0 35.0 37.0 35.0 37.0 7 36.161868985651225 37.0 35.0 37.0 35.0 37.0 8 36.109091619897185 37.0 35.0 37.0 35.0 37.0 9 37.87853272024201 39.0 38.0 39.0 35.0 39.0 10 37.47532284455053 39.0 37.0 39.0 35.0 39.0 11 37.219757362097575 39.0 37.0 39.0 34.0 39.0 12 36.6125807901887 39.0 35.0 39.0 33.0 39.0 13 36.37973717101821 39.0 35.0 39.0 32.0 39.0 14 37.40153686769209 40.0 35.0 41.0 33.0 41.0 15 37.57061761016269 40.0 35.0 41.0 33.0 41.0 16 37.66836612084062 40.0 35.0 41.0 33.0 41.0 17 37.6294396515544 40.0 35.0 41.0 33.0 41.0 18 37.4742109553853 39.0 35.0 41.0 33.0 41.0 19 37.38781360276236 39.0 35.0 41.0 33.0 41.0 20 37.18579357495938 39.0 35.0 41.0 32.0 41.0 21 37.141390447871714 39.0 35.0 41.0 33.0 41.0 22 37.08032968031174 39.0 35.0 41.0 32.0 41.0 23 37.03398103464334 38.0 35.0 41.0 32.0 41.0 24 36.96231995041917 38.0 35.0 41.0 32.0 41.0 25 36.85944893071217 38.0 35.0 41.0 32.0 41.0 26 36.740366405999374 38.0 35.0 41.0 32.0 41.0 27 36.637092944505575 38.0 35.0 41.0 32.0 41.0 28 36.64589607113331 38.0 35.0 41.0 32.0 41.0 29 36.64475888562719 38.0 35.0 41.0 32.0 41.0 30 36.550257505251864 38.0 35.0 41.0 31.0 41.0 31 36.365115885987095 38.0 35.0 41.0 31.0 41.0 32 36.19922133263423 38.0 35.0 41.0 30.0 41.0 33 36.00515010503731 38.0 35.0 41.0 30.0 41.0 34 35.771516550131025 38.0 35.0 41.0 29.0 41.0 35 35.63368943682296 38.0 35.0 41.0 29.0 41.0 36 35.5375219474503 38.0 35.0 41.0 28.0 41.0 37 35.484372035585054 38.0 35.0 41.0 28.0 41.0 38 35.393452387112205 38.0 35.0 41.0 27.0 41.0 39 35.304648432604225 38.0 35.0 40.0 27.0 41.0 40 35.183971088582034 38.0 35.0 40.0 26.0 41.0 41 35.13150877725537 37.0 34.0 40.0 26.0 41.0 42 35.05020978715429 37.0 34.0 40.0 26.0 41.0 43 34.94516098246389 37.0 34.0 40.0 26.0 41.0 44 34.78925503425929 37.0 34.0 40.0 25.0 41.0 45 34.70179868482024 36.0 34.0 40.0 24.0 41.0 46 34.66582153891439 36.0 34.0 40.0 24.0 41.0 47 34.6302882288077 36.0 34.0 40.0 24.0 41.0 48 34.55210528797009 36.0 34.0 40.0 24.0 41.0 49 34.483613145358525 36.0 34.0 40.0 24.0 41.0 50 34.38281987510506 36.0 34.0 40.0 24.0 41.0 51 34.03603923692438 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 11.0 14 7.0 15 22.0 16 53.0 17 133.0 18 317.0 19 553.0 20 1016.0 21 1752.0 22 2772.0 23 4041.0 24 6210.0 25 9422.0 26 13381.0 27 16027.0 28 16818.0 29 17163.0 30 19093.0 31 22453.0 32 27933.0 33 36895.0 34 69263.0 35 111754.0 36 58631.0 37 76957.0 38 118081.0 39 238730.0 40 197.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.31505097787605 22.2155915146874 27.81585643636648 16.65350107107007 2 34.42280074187269 23.861463439313503 28.569112477880076 13.146623340933733 3 29.027206214621053 24.012321617678005 33.60480906436884 13.355663103332102 4 26.11030814392698 25.851135633230655 33.55962060088008 14.478935621962282 5 23.593897142778296 30.757245964371254 31.397013422008506 14.251843470841944 6 21.97148182515399 38.994769406605336 28.382954405645222 10.65079436259545 7 84.45401872619126 3.8833332758416494 9.738976257084413 1.9236717408826813 8 85.39998689189609 2.797085401596659 9.587543161881634 2.21538454462562 9 80.80134208586728 4.499644126477105 11.259631294333275 3.4393824933223414 10 46.80949900596879 23.695542439786085 18.36617833230423 11.128780221940897 11 39.19415056612061 20.810264795197376 24.63886598803483 15.356718650647183 12 34.61884738372594 19.976750363059985 28.568192610938826 16.836209642275247 13 25.243563518537044 26.659008774380787 29.51416077664366 18.583266930438512 14 18.897516474242 29.365027348793998 33.235712454193504 18.5017437227705 15 19.441617769989573 21.836491351526004 41.6558294842651 17.066061394219325 16 24.12673006849559 19.862571878977704 37.80457656799944 18.206121484527262 17 23.637590822487528 19.75448751338119 30.50888189023458 26.099039773896703 18 25.57667033463609 22.328045248254842 32.246510542250064 19.848773874859003 19 28.10618943969755 23.81650494256006 28.178284011217773 19.899021606524617 20 28.90842839583254 24.405449751693418 27.554729208420003 19.13139264405404 21 26.059255528687775 24.55538806311667 30.15116863345717 19.234187774738384 22 24.387167396236133 22.4232514766739 30.55188566973787 22.637695457352095 23 23.35703140540721 24.384292812044738 30.218778853638824 22.039896928909233 24 24.05107101257803 22.262964662161618 33.204436978191104 20.481527347069246 25 22.575604438817926 23.16799874898096 31.642042978483165 22.614353833717953 26 20.67044502012784 26.53551663751838 29.83611420608009 22.95792413627369 27 21.127848856662883 24.927474240851062 31.85694689263198 22.087730009854077 28 19.47588281355102 25.31899260771929 34.46867910556738 20.736445473162306 29 21.756807877740485 24.252521872711114 33.15924851470235 20.831421734846053 30 23.987255243529024 24.012551584413313 31.61076750248077 20.389425669576898 31 27.920031367462695 22.36506989264003 28.958216194027536 20.75668254586974 32 29.107349621877194 23.79454311933779 28.075948814004054 19.022158444780963 33 27.692364299504074 24.109137613244243 28.434926887825675 19.763571199426003 34 22.820059078454303 24.7783408130014 31.599039198979867 20.802560909564434 35 23.18271662004091 26.000728994550936 30.24350027768483 20.57305410772332 36 26.372930155652984 26.24012436601046 27.43089212145463 19.956053356881927 37 24.47214010493382 28.790915394088245 26.827459407996635 19.9094850929813 38 24.387972279809723 29.00501442466347 25.065454282038104 21.541559013488698 39 24.208253276163603 27.114802843768647 26.35694746754882 22.31999641251893 40 24.754079322426012 24.463171402256663 27.16206100787521 23.620688267442112 41 20.828547150654657 24.493182061214846 27.346609312962876 27.331661475167618 42 22.80304154004123 25.763058373606256 26.458362797821295 24.975537288531214 43 22.93251281202174 24.700267106363064 28.030760350515298 24.336459731099897 44 22.439004198042753 26.38385357558029 28.302581031653773 22.874561194723185 45 22.112796384003055 27.73099871103645 26.31681827223692 23.839386632723578 46 23.649089159253116 27.059035910455552 28.272915322798557 21.018959607492775 47 23.029788741058606 25.08051710320102 28.921766466480626 22.96792768925975 48 23.16420429784832 23.463965937327167 30.232001940919247 23.139827823905275 49 23.160294863348017 22.714734313681525 30.623175357684513 23.501795465285944 50 21.108301684161386 26.78618037900818 29.016397778061403 23.089120158769035 51 21.223170068449598 27.730768744301137 27.760204486421042 23.285856700828226 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 440.0 1 900.5 2 1361.0 3 9180.0 4 16999.0 5 11466.5 6 5934.0 7 5734.0 8 5534.0 9 5613.0 10 5692.0 11 5500.0 12 5308.0 13 5047.5 14 4787.0 15 4504.0 16 4221.0 17 3990.5 18 3760.0 19 3760.0 20 3760.0 21 3605.5 22 3451.0 23 3620.0 24 3789.0 25 4237.5 26 5314.0 27 5942.0 28 6717.5 29 7493.0 30 8898.5 31 10304.0 32 12300.0 33 14296.0 34 15314.5 35 16333.0 36 18793.5 37 21254.0 38 24414.0 39 27574.0 40 34273.0 41 40972.0 42 47068.0 43 53164.0 44 56137.0 45 59110.0 46 60039.0 47 60968.0 48 61882.0 49 62796.0 50 62281.5 51 61767.0 52 58997.0 53 56227.0 54 53208.0 55 50189.0 56 49421.0 57 48653.0 58 47971.0 59 47289.0 60 45118.0 61 42947.0 62 39837.5 63 36728.0 64 32113.5 65 27499.0 66 22847.5 67 18196.0 68 15139.0 69 12082.0 70 9970.0 71 7858.0 72 6312.5 73 4767.0 74 3770.0 75 2083.5 76 1394.0 77 1080.0 78 766.0 79 564.0 80 362.0 81 256.5 82 151.0 83 102.0 84 53.0 85 38.0 86 23.0 87 21.5 88 20.0 89 14.0 90 8.0 91 7.5 92 7.0 93 5.0 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 869691.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.61027495101874 #Duplication Level Percentage of deduplicated Percentage of total 1 74.41912714100039 20.54732561977842 2 5.804174514091482 3.205097083955229 3 2.4682499191400993 2.0444717674586372 4 1.6578512102920422 1.8309491097616994 5 1.3315992689384835 1.8382910969983541 6 1.095052972643794 1.8140828196375338 7 0.9709973347577462 1.8766652372557435 8 0.880347979698808 1.9445319817646367 9 0.7765985282555637 1.9297889002523352 >10 10.46895841944113 58.68131811311539 >50 0.10272430504107438 1.7751428899038837 >100 0.02347984095113171 1.2355614925813585 >500 4.19282874127352E-4 0.09689543420693311 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.19282874127352E-4 1.1798784533298234 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10192 1.1719104831486127 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04748813084187372 0.0 2 0.0 0.0 0.0 0.16764575004225638 0.0 3 0.0 0.0 0.0 0.28159426738922216 0.0 4 1.1498336765586858E-4 0.0 0.0 0.3908284666622973 0.0 5 1.1498336765586858E-4 0.0 0.0 0.6563250625796978 0.0 6 1.1498336765586858E-4 0.0 0.0 1.044738878521222 0.0 7 1.1498336765586858E-4 0.0 0.0 1.3288627799988733 0.0 8 1.1498336765586858E-4 0.0 0.0 1.9263163583387664 0.0 9 1.1498336765586858E-4 0.0 0.0 2.315994991324505 0.0 10 2.2996673531173716E-4 0.0 0.0 2.754311588828676 0.0 11 2.2996673531173716E-4 0.0 0.0 3.08316402032446 0.0 12 2.2996673531173716E-4 0.0 0.0 3.336127429167371 0.0 13 2.2996673531173716E-4 0.0 0.0 3.452605580602766 0.0 14 2.2996673531173716E-4 0.0 0.0 3.522515468137534 0.0 15 2.2996673531173716E-4 0.0 0.0 3.58886087127497 0.0 16 2.2996673531173716E-4 0.0 0.0 3.706258889651612 0.0 17 2.2996673531173716E-4 0.0 0.0 3.8319357104994762 0.0 18 2.2996673531173716E-4 0.0 0.0 4.00188112789485 0.0 19 2.2996673531173716E-4 0.0 0.0 4.1008818074465525 0.0 20 2.2996673531173716E-4 0.0 0.0 4.2175899256172595 0.0 21 2.2996673531173716E-4 0.0 0.0 4.354305149760087 0.0 22 2.2996673531173716E-4 0.0 0.0 4.504933361389275 0.0 23 2.2996673531173716E-4 0.0 0.0 4.663725392122029 0.0 24 2.2996673531173716E-4 0.0 0.0 4.788022412558023 0.0 25 2.2996673531173716E-4 0.0 0.0 4.894497011007358 0.0 26 2.2996673531173716E-4 0.0 0.0 5.005685927530583 0.0 27 2.2996673531173716E-4 0.0 0.0 5.135272182878746 0.0 28 2.2996673531173716E-4 0.0 0.0 5.259339236579429 0.0 29 2.2996673531173716E-4 0.0 0.0 5.399159011648965 0.0 30 2.2996673531173716E-4 0.0 0.0 5.581637616118829 0.0 31 2.2996673531173716E-4 0.0 0.0 5.721687357923677 0.0 32 2.2996673531173716E-4 0.0 0.0 5.863231883508051 0.0 33 2.2996673531173716E-4 0.0 0.0 6.006731126342575 0.0 34 2.2996673531173716E-4 0.0 0.0 6.1671329242225115 0.0 35 2.2996673531173716E-4 0.0 0.0 6.340412859279905 0.0 36 2.2996673531173716E-4 0.0 0.0 6.500699673792186 0.0 37 2.2996673531173716E-4 0.0 0.0 6.682488378056115 0.0 38 2.2996673531173716E-4 0.0 0.0 6.91360494704441 0.0 39 2.2996673531173716E-4 0.0 0.0 7.246251829672838 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATA 20 7.032337E-4 45.000004 30 TTATCGG 50 2.1827873E-11 45.0 2 TTACGCG 25 3.890021E-5 45.0 1 CGTTTTT 5250 0.0 43.07143 1 CGTAAGG 120 0.0 41.250004 2 GCGTAAG 60 3.6379788E-12 41.250004 1 ATTAGCG 50 1.0804797E-9 40.5 1 ACGGGAC 125 0.0 39.6 5 ACGGGTA 80 0.0 39.375004 5 GGCGATT 340 0.0 39.044117 8 CGGACGG 35 6.246535E-6 38.571426 2 CGGTAGT 95 0.0 37.894737 12 GGGCGAT 1060 0.0 37.570755 7 ATTCGCG 30 1.1396932E-4 37.500004 1 GCGATAT 30 1.1396932E-4 37.500004 9 TCGTAAG 30 1.1396932E-4 37.500004 1 TAGTACG 30 1.1396932E-4 37.500004 1 GCGATTT 115 0.0 37.173916 9 AGGGCGA 565 0.0 37.035397 6 GTAGGGT 360 0.0 36.875 4 >>END_MODULE