##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547070_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 999371 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56034245540445 31.0 31.0 33.0 30.0 34.0 2 31.94098187760101 31.0 31.0 34.0 30.0 34.0 3 32.056417486599074 33.0 31.0 34.0 30.0 34.0 4 35.75763755402148 37.0 35.0 37.0 35.0 37.0 5 35.70004933102922 37.0 35.0 37.0 33.0 37.0 6 35.730838697540754 37.0 35.0 37.0 33.0 37.0 7 36.02248714441384 37.0 35.0 37.0 35.0 37.0 8 35.95897119288032 37.0 35.0 37.0 35.0 37.0 9 37.707260867085395 39.0 38.0 39.0 35.0 39.0 10 37.22801241981206 39.0 37.0 39.0 34.0 39.0 11 37.01663346244788 39.0 37.0 39.0 33.0 39.0 12 36.42484222576 38.0 35.0 39.0 32.0 39.0 13 36.15353957639355 39.0 35.0 39.0 32.0 39.0 14 37.19822268206702 39.0 35.0 41.0 32.0 41.0 15 37.394715275908545 39.0 35.0 41.0 32.0 41.0 16 37.484660851675706 39.0 35.0 41.0 33.0 41.0 17 37.47957165056821 39.0 35.0 41.0 33.0 41.0 18 37.32022442116091 39.0 35.0 41.0 32.0 41.0 19 37.2995083907778 39.0 35.0 41.0 32.0 41.0 20 37.15008040057196 39.0 35.0 41.0 32.0 41.0 21 36.965809494171836 39.0 35.0 41.0 32.0 41.0 22 36.93651506797776 39.0 35.0 41.0 32.0 41.0 23 36.87911296205313 38.0 35.0 41.0 32.0 41.0 24 36.851073325121504 38.0 35.0 41.0 32.0 41.0 25 36.67570501845661 38.0 35.0 41.0 31.0 41.0 26 36.55776083156305 38.0 35.0 41.0 31.0 41.0 27 36.47211896282762 38.0 35.0 41.0 31.0 41.0 28 36.48774178958565 38.0 35.0 41.0 31.0 41.0 29 36.48160092698307 38.0 35.0 41.0 31.0 41.0 30 36.42286698333252 38.0 35.0 41.0 31.0 41.0 31 36.29094800629596 38.0 35.0 41.0 30.0 41.0 32 36.191747609246214 38.0 35.0 41.0 30.0 41.0 33 36.06566830536407 38.0 35.0 41.0 30.0 41.0 34 35.88889411439796 38.0 35.0 41.0 30.0 41.0 35 35.86746163336739 38.0 35.0 41.0 29.0 41.0 36 35.73589487787819 38.0 35.0 41.0 29.0 41.0 37 35.64499169977916 38.0 35.0 41.0 29.0 41.0 38 35.54593739462122 38.0 35.0 41.0 28.0 41.0 39 35.49855859335522 38.0 35.0 41.0 28.0 41.0 40 35.35136801047859 38.0 35.0 40.0 27.0 41.0 41 35.31062138084855 38.0 35.0 40.0 27.0 41.0 42 35.22319739115904 38.0 35.0 40.0 27.0 41.0 43 35.147564818270695 37.0 34.0 40.0 27.0 41.0 44 35.02259821427678 37.0 34.0 40.0 26.0 41.0 45 34.916460453625334 37.0 34.0 40.0 26.0 41.0 46 34.91527170590301 37.0 34.0 40.0 26.0 41.0 47 34.86972805894908 37.0 34.0 40.0 26.0 41.0 48 34.82873927700523 36.0 34.0 40.0 26.0 41.0 49 34.7726049685252 36.0 34.0 40.0 26.0 41.0 50 34.62512020060618 36.0 34.0 40.0 26.0 41.0 51 34.27875633773644 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 6.0 14 10.0 15 31.0 16 91.0 17 235.0 18 569.0 19 1255.0 20 1948.0 21 2854.0 22 4425.0 23 6350.0 24 8401.0 25 10874.0 26 13728.0 27 15699.0 28 16823.0 29 18582.0 30 21808.0 31 25746.0 32 32740.0 33 42624.0 34 76626.0 35 132269.0 36 65606.0 37 86173.0 38 134111.0 39 279574.0 40 208.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.95983173416079 22.075285354487974 30.919848584759812 14.045034326591427 2 33.58682611362547 23.817981510370025 29.57009959264377 13.025092783360734 3 28.417574654457656 26.92063307820619 31.226841683418872 13.434950583917285 4 25.17223333476757 29.366271384700976 31.085152560960843 14.376342719570609 5 23.931753072682717 30.942662934986103 31.122375974487955 14.003208017843225 6 23.754941858428953 39.41018900888659 25.63302317157492 11.20184596110954 7 85.62055532930214 5.785839292915243 6.76925786319595 1.8243475145866752 8 86.68092230012678 2.6705797946908607 8.623824385538503 2.024673519643856 9 82.04570674954546 6.23712315046164 8.65744553324041 3.0597245667524873 10 44.38271672882243 24.448978407418267 17.770077378671186 13.398227485088121 11 40.92824386539134 22.189357105619433 21.439285310460278 15.443113718528956 12 36.22438513825196 21.50542691352861 25.330733031076548 16.939454917142882 13 23.26103118861764 30.559822128118586 27.170690364239107 19.008456319024667 14 19.913225418788418 33.003359112882 29.693277071277834 17.390138397051746 15 17.959396460373576 24.97240764440833 40.07090459899277 16.997291296225324 16 20.277154330073614 21.53544579540531 38.546545777293915 19.640854097227155 17 20.831503015396684 20.66649922801442 28.015721889068224 30.486275867520668 18 23.854804672138773 24.293080347538602 31.37433445637306 20.477780523949566 19 27.333092515192053 24.606577537270944 26.52908679559443 21.531243151942572 20 29.141930274142435 24.853732998055776 24.78138749273293 21.222949235068857 21 26.05608928015722 26.08300621090666 28.266979930376205 19.593924578559914 22 23.790564264922637 24.283774494156823 27.77897297400065 24.14668826691989 23 21.360635839943324 26.992878520589453 28.54845697944007 23.098028660027158 24 21.965116058000483 24.44567633041183 34.20551526910426 19.38369234248342 25 21.46930419233698 24.786690828531146 31.57546096494695 22.16854401418492 26 20.05321347127343 30.949167026059392 27.265249842150713 21.732369660516465 27 20.615367065884442 28.820327986303383 29.74801149923302 20.816293448579156 28 18.38336313541217 26.761833193078445 34.670607812313946 20.184195859195434 29 20.36510965397235 24.974609029079293 33.00015709881515 21.660124218133205 30 22.096398634741252 26.830676495515682 30.42733879610275 20.64558607364032 31 26.992878520589453 24.874045774792343 26.966561967477542 21.16651373714066 32 28.09537198898107 25.80953419700992 26.699093729956143 19.39600008405287 33 25.91259902478659 25.060563094186243 26.60463431498413 22.42220356604304 34 21.865553433109426 25.583992331176308 29.257102717609378 23.29335151810489 35 23.05440121836635 25.577388177163435 29.506159374246398 21.862051230223813 36 27.086837620863523 24.79229435314813 26.683383848440666 21.437484177547677 37 23.424834220724836 27.970593503313584 28.01472125967233 20.589851016289245 38 22.271708904901182 29.872589859021325 25.582791575901243 22.27290966017625 39 22.834863128908083 27.720536217280667 26.57671675483879 22.867883898972455 40 24.139183546450717 25.412684578599936 25.744893538035424 24.70323833691392 41 20.097941605269714 24.952094867671764 27.01209060499054 27.93787292206798 42 22.902605739009836 25.917301982947272 25.758902349577884 25.421189928465004 43 22.15043262211931 25.62481801052862 26.8751044406932 25.349644926658872 44 21.34602665076333 28.026828875362604 27.41204217452778 23.215102299346288 45 20.625073171024574 29.76512226190274 25.554273638118374 24.05553092895431 46 23.311362847230907 27.956584691771123 26.86910066431786 21.86295179668011 47 22.69997828634211 25.5794894988948 28.952411066560867 22.76812114820222 48 23.339980847953363 22.762817812404002 31.019411209650873 22.877790129991766 49 22.13092034889946 23.433139444710722 30.311766100877453 24.124174105512367 50 20.699820186897558 28.359638212435623 28.098273814229152 22.84226778643767 51 20.82690012017559 28.529745209736923 26.802058494793222 23.84129617529426 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 421.0 1 799.5 2 1178.0 3 5270.0 4 9362.0 5 6621.5 6 3881.0 7 3846.5 8 3812.0 9 4049.0 10 4286.0 11 4253.0 12 4220.0 13 4036.5 14 3853.0 15 3609.5 16 3366.0 17 3418.5 18 3471.0 19 3325.0 20 3179.0 21 3204.5 22 3230.0 23 3636.0 24 4042.0 25 4834.0 26 6476.5 27 7327.0 28 8504.0 29 9681.0 30 11863.0 31 14045.0 32 16314.0 33 18583.0 34 19861.0 35 21139.0 36 23979.5 37 26820.0 38 31312.0 39 35804.0 40 45919.5 41 56035.0 42 65933.0 43 75831.0 44 80284.5 45 84738.0 46 84026.5 47 83315.0 48 82613.0 49 81911.0 50 78767.5 51 75624.0 52 71913.0 53 68202.0 54 62920.0 55 57638.0 56 53082.0 57 48526.0 58 47170.5 59 45815.0 60 42653.0 61 39491.0 62 34888.0 63 30285.0 64 26377.5 65 22470.0 66 18961.0 67 15452.0 68 12861.0 69 10270.0 70 8265.0 71 6260.0 72 5379.5 73 4499.0 74 3697.5 75 2093.0 76 1290.0 77 1021.0 78 752.0 79 608.0 80 464.0 81 302.5 82 141.0 83 110.0 84 79.0 85 53.0 86 27.0 87 18.5 88 10.0 89 8.0 90 6.0 91 7.5 92 9.0 93 8.5 94 8.0 95 4.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 999371.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.401864065436268 #Duplication Level Percentage of deduplicated Percentage of total 1 77.89823880574141 19.008622342745944 2 5.794509901963798 2.827936859070901 3 2.100115468674198 1.5374019656492326 4 1.2147717318909432 1.1857077868854957 5 0.8561998297363979 1.0446435929038629 6 0.7133118151020701 1.0443682769034195 7 0.5698715021606885 0.9734148851343765 8 0.517725329382428 1.010677048865858 9 0.4628197695694805 1.0164298593447902 >10 9.015413478328048 55.21087409814414 >50 0.8157399799232988 12.116008397163194 >100 0.037979796525110625 1.521426695356539 >500 0.0012384716258188248 0.1971417627499667 >1k 0.0016512955010917665 0.7763779077741406 >5k 4.128238752729416E-4 0.528968521308163 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5251 0.5254304957818469 No Hit TGAATGATACCTGTCTCTTATACACATCTGACGCGCTTCAGTTCGTATGCC 3616 0.3618275895538293 No Hit TGAATCTGTCTCTTATACACATCTGACGCGCTTCAGTTCGTATGCCGTCTT 1680 0.16810573850952248 No Hit TGAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTCAGTTCGTATG 1264 0.12647955564049787 No Hit TGAACTGTCTCTTATACACATCTGACGCGCTTCAGTTCGTATGCCGTCTTC 1147 0.11477219170858469 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0006293958900148E-4 0.0 0.0 0.05323348386134879 0.0 2 1.0006293958900148E-4 0.0 0.0 0.14329012949145012 0.0 3 1.0006293958900148E-4 0.0 0.0 0.2436532578992186 0.0 4 1.0006293958900148E-4 0.0 0.0 0.3476186521321912 0.0 5 1.0006293958900148E-4 0.0 0.0 0.7326608436706689 0.0 6 1.0006293958900148E-4 0.0 0.0 1.2627942976131987 0.0 7 1.0006293958900148E-4 0.0 0.0 1.5268603951885735 0.0 8 1.0006293958900148E-4 0.0 0.0 2.1307402356081977 0.0 9 1.0006293958900148E-4 0.0 0.0 2.421523138053836 0.0 10 1.0006293958900148E-4 0.0 0.0 2.84599012779038 0.0 11 1.0006293958900148E-4 0.0 0.0 3.5639417193414658 0.0 12 1.0006293958900148E-4 0.0 0.0 3.858927265249842 0.0 13 1.0006293958900148E-4 0.0 0.0 4.13570135615302 0.0 14 1.0006293958900148E-4 0.0 0.0 4.204044343892308 0.0 15 1.0006293958900148E-4 0.0 0.0 4.293600674824464 0.0 16 1.0006293958900148E-4 0.0 0.0 4.511137505490954 0.0 17 1.0006293958900148E-4 0.0 0.0 4.702557908924714 0.0 18 1.0006293958900148E-4 0.0 0.0 4.946011040944755 0.0 19 1.0006293958900148E-4 0.0 0.0 5.077393680625113 0.0 20 1.0006293958900148E-4 0.0 0.0 5.2896271754933855 0.0 21 1.0006293958900148E-4 0.0 0.0 5.468039396780575 0.0 22 1.0006293958900148E-4 0.0 0.0 5.639347149356945 0.0 23 2.0012587917800297E-4 0.0 0.0 5.834870133313855 0.0 24 2.0012587917800297E-4 0.0 0.0 5.976959507530236 0.0 25 2.0012587917800297E-4 0.0 0.0 6.102238307895666 0.0 26 2.0012587917800297E-4 0.0 0.0 6.222213772462879 0.0 27 2.0012587917800297E-4 0.0 0.0 6.352895971566115 0.0 28 2.0012587917800297E-4 0.0 0.0 6.487080373554966 0.0 29 2.0012587917800297E-4 0.0 0.0 6.640676985824084 0.0 30 2.0012587917800297E-4 0.0 0.0 6.842303809095921 0.0 31 2.0012587917800297E-4 0.0 0.0 6.9976014913380515 0.0 32 2.0012587917800297E-4 0.0 0.0 7.1521987330030585 0.0 33 2.0012587917800297E-4 0.0 0.0 7.306295659970122 0.0 34 2.0012587917800297E-4 0.0 0.0 7.470899195594028 0.0 35 3.0018881876700445E-4 0.0 0.0 7.664921235457102 0.0 36 3.0018881876700445E-4 0.0 0.0 7.837930058006486 0.0 37 3.0018881876700445E-4 0.0 0.0 7.997730572530122 0.0 38 3.0018881876700445E-4 0.0 0.0 8.183547451346897 0.0 39 3.0018881876700445E-4 0.0 0.0 8.404086170201056 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 30 2.1652158E-6 45.000004 1 CGTATCC 20 7.032846E-4 45.0 23 CGTATCA 20 7.032846E-4 45.0 36 GTCGACG 25 3.8904393E-5 45.0 1 ACCGCGA 25 3.8904393E-5 45.0 32 ACTCGTC 20 7.032846E-4 45.0 14 CGTTTTT 3550 0.0 42.46479 1 CGTAAGG 135 0.0 41.666664 2 GACGGGT 170 0.0 41.02941 4 CGATTGA 965 0.0 40.569946 20 TTCGATA 50 1.0804797E-9 40.5 15 TCAACGG 50 1.0804797E-9 40.5 2 ATTAGCG 95 0.0 40.263157 1 ATAGGGC 455 0.0 40.054943 4 TAACGGG 265 0.0 39.905663 3 ATTGAAT 1005 0.0 39.850746 22 CGTTAGG 85 0.0 39.705883 2 TTAACGG 85 0.0 39.705883 2 ATATCGG 40 3.457626E-7 39.375 2 GCGATAA 80 0.0 39.375 9 >>END_MODULE