##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547069_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1049307 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.65888057546552 31.0 31.0 33.0 30.0 34.0 2 32.04394138226468 33.0 31.0 34.0 30.0 34.0 3 32.13941677697757 33.0 31.0 34.0 30.0 34.0 4 35.80775978812683 37.0 35.0 37.0 35.0 37.0 5 35.737083618045055 37.0 35.0 37.0 33.0 37.0 6 35.79038927596976 37.0 35.0 37.0 35.0 37.0 7 36.11194340645778 37.0 35.0 37.0 35.0 37.0 8 36.05866443281137 37.0 35.0 37.0 35.0 37.0 9 37.853554774722745 39.0 38.0 39.0 35.0 39.0 10 37.41070153920635 39.0 37.0 39.0 35.0 39.0 11 37.079709751292995 39.0 37.0 39.0 33.0 39.0 12 36.17059926217971 38.0 35.0 39.0 32.0 39.0 13 35.73503845871608 38.0 35.0 39.0 31.0 39.0 14 36.70205001967965 39.0 35.0 41.0 31.0 41.0 15 37.00603445893337 39.0 35.0 41.0 32.0 41.0 16 37.17793743870955 39.0 35.0 41.0 33.0 41.0 17 37.166903489636496 38.0 35.0 41.0 33.0 41.0 18 37.09605768378558 38.0 35.0 41.0 32.0 41.0 19 37.0467098761373 38.0 35.0 41.0 32.0 41.0 20 36.86428566663522 38.0 35.0 41.0 32.0 41.0 21 36.766550685357096 38.0 35.0 41.0 32.0 41.0 22 36.67607954583358 38.0 35.0 41.0 32.0 41.0 23 36.65927035653055 38.0 35.0 41.0 32.0 41.0 24 36.55659687774884 38.0 35.0 41.0 32.0 41.0 25 36.44698834564146 38.0 35.0 40.0 31.0 41.0 26 36.31033625049675 37.0 35.0 40.0 31.0 41.0 27 36.24962761136636 37.0 35.0 40.0 31.0 41.0 28 36.28949106410231 37.0 35.0 40.0 31.0 41.0 29 36.33023986307153 37.0 35.0 40.0 31.0 41.0 30 36.300910029190696 37.0 35.0 40.0 31.0 41.0 31 36.15085861430449 37.0 35.0 40.0 31.0 41.0 32 36.01693879865473 37.0 35.0 40.0 30.0 41.0 33 35.92763986135611 37.0 35.0 40.0 30.0 41.0 34 35.80340834474563 37.0 35.0 40.0 30.0 41.0 35 35.72792042748214 37.0 35.0 40.0 30.0 41.0 36 35.60184388362986 37.0 35.0 40.0 30.0 41.0 37 35.51022817916968 37.0 35.0 40.0 29.0 41.0 38 35.452367133736836 37.0 34.0 40.0 29.0 41.0 39 35.4202840541424 36.0 35.0 40.0 29.0 41.0 40 35.26809122592339 36.0 34.0 40.0 29.0 41.0 41 35.235955730782315 36.0 34.0 40.0 29.0 41.0 42 35.15588860076222 36.0 34.0 40.0 28.0 41.0 43 35.02362892842609 36.0 34.0 40.0 28.0 41.0 44 34.89989488300373 35.0 34.0 40.0 27.0 41.0 45 34.794612063009204 35.0 34.0 40.0 27.0 41.0 46 34.768203204591224 35.0 34.0 40.0 27.0 41.0 47 34.72689594179778 35.0 34.0 40.0 27.0 41.0 48 34.66272882959896 35.0 34.0 40.0 27.0 41.0 49 34.61402144462964 35.0 34.0 40.0 27.0 41.0 50 34.48450262887792 35.0 34.0 40.0 27.0 41.0 51 34.112099700087775 35.0 34.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 4.0 14 15.0 15 27.0 16 76.0 17 161.0 18 378.0 19 754.0 20 1359.0 21 2187.0 22 3245.0 23 4793.0 24 6917.0 25 10118.0 26 13729.0 27 16666.0 28 18197.0 29 20511.0 30 23639.0 31 29073.0 32 36762.0 33 48579.0 34 95069.0 35 178520.0 36 66142.0 37 86341.0 38 129221.0 39 256605.0 40 213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.08069039852017 22.936471404460278 30.013523211033565 13.969314985985989 2 30.85512628811206 25.315184212056145 30.740574493451394 13.089115006380403 3 29.2582628344231 24.951325017368607 31.9416529194983 13.848759228709998 4 26.473091287869043 26.801498512827994 31.257772987314485 15.467637211988484 5 23.95886046695581 32.120056380067986 29.07652383906712 14.844559313909084 6 22.29490511356543 39.84648915903544 26.550570995904916 11.308034731494216 7 87.13465172728286 4.288068220263469 6.721865002330109 1.8554150501235576 8 88.57979599869246 2.8517869412860106 6.282241517496787 2.286175542524733 9 84.92328746496497 3.975480960290935 7.824306899696657 3.276924675047436 10 53.615290853868316 21.10430979684687 13.06090591218776 12.219493437097055 11 46.88780309289846 19.271481082276207 19.507922848127382 14.332792976697952 12 41.040229408552506 19.984809021573284 23.11563727298112 15.859324296893092 13 23.070845805850908 35.68145452188921 24.655510732321428 16.592188939938453 14 16.685583913954638 38.11182046817566 28.546364410034432 16.65623120783527 15 16.573700547123003 21.70699328223294 46.44484407327884 15.274462097365213 16 18.80898535890831 18.54061776010262 43.219000730958626 19.43139615003045 17 20.133192669066347 18.201250920845855 27.333373359750766 34.332183050337036 18 24.51122502756581 22.16062601316869 31.77154064539739 21.556608313868107 19 28.993135469409808 24.049015207179593 24.80418028279617 22.153669040614425 20 31.14093396880036 23.839448321606547 23.676960127017168 21.342657582575928 21 25.246281593470737 26.665980499510628 26.736789137973922 21.350948769044713 22 24.389811561344775 22.61883319181136 26.8864116983876 26.104943548456266 23 22.4735944771168 27.824364080292995 25.018702820051708 24.683338622538496 24 23.236193030257112 22.60968429639753 34.22563653916347 19.928486134181895 25 19.869399517967572 23.748245270449925 33.10241902512801 23.27993618645449 26 18.662412430299234 31.29913361866451 26.8495302137506 23.188923737285656 27 19.877118898472993 28.955015071852188 29.211946551390582 21.95591947828424 28 17.54291165502565 26.95245528715619 36.32006648197334 19.18456657584482 29 18.77315218520414 23.568031090996246 35.53764532210306 22.12117140169655 30 21.164063520018452 26.055482332625246 30.427701330497175 22.352752816859127 31 29.24168046148553 24.337777218678614 24.442417709974297 21.978124609861556 32 29.762500393116596 25.82752235523064 25.12267620439014 19.287301047262623 33 27.40380079423848 25.709253821808108 25.80712794253731 21.079817441416097 34 19.989478770274093 27.080253919968133 29.126461559867607 23.803805749890167 35 21.054657979028065 25.898998100651195 30.134460172285138 22.911883748035606 36 29.13170311453178 23.672766883285824 26.142396839056637 21.053133163125757 37 22.306055329851034 29.05336569755086 27.735734155971514 20.904844816626593 38 22.751015670342426 29.20546608380579 23.995837252586707 24.04768099326508 39 22.146807369054052 27.808734717294364 26.233313987231572 23.81114392642001 40 24.158992554133345 24.68819897322709 25.263054568396093 25.889753904243467 41 19.114425044338788 23.450239062543183 26.928439436694884 30.506896456423142 42 24.13049755695902 25.222075141021644 24.044154856490998 26.603272445528336 43 23.579276608275748 25.44298284486809 25.546289122249256 25.431451424606905 44 21.820306163972983 29.01686541688943 26.266574034100604 22.896254385036983 45 20.261944311817228 32.44512807024064 23.20398129432092 24.08894632362121 46 23.534866345121113 28.479844316296376 26.38074462478569 21.60454471379682 47 22.833736933042477 25.81294130316485 27.094644370046133 24.258677393746538 48 24.633877406707473 22.525533518789068 28.78004244706268 24.060546627440775 49 22.519529556173744 21.244974063834512 30.731044394061986 25.50445198592976 50 20.250603493543835 29.014768795023766 27.09759870085685 23.637029010575553 51 19.89389187339835 31.47258142755171 23.991167503885897 24.642359195164047 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 621.0 1 965.5 2 1310.0 3 4776.5 4 8243.0 5 5773.0 6 3303.0 7 3464.0 8 3625.0 9 3873.5 10 4122.0 11 4177.5 12 4233.0 13 4073.5 14 3914.0 15 3836.0 16 3758.0 17 3488.0 18 3218.0 19 3111.5 20 3005.0 21 3031.5 22 3058.0 23 3166.5 24 3275.0 25 3337.0 26 4202.5 27 5006.0 28 5633.0 29 6260.0 30 8441.5 31 10623.0 32 11741.5 33 12860.0 34 15692.0 35 18524.0 36 19841.5 37 21159.0 38 27566.0 39 33973.0 40 47191.5 41 60410.0 42 74288.0 43 88166.0 44 90300.0 45 92434.0 46 91598.5 47 90763.0 48 88039.5 49 85316.0 50 83854.5 51 82393.0 52 76118.0 53 69843.0 54 66131.5 55 62420.0 56 57619.5 57 52819.0 58 51185.5 59 49552.0 60 46830.0 61 44108.0 62 40277.0 63 36446.0 64 31703.5 65 26961.0 66 22443.5 67 17926.0 68 14881.0 69 11836.0 70 10227.5 71 8619.0 72 7089.0 73 5559.0 74 4422.0 75 2373.0 76 1461.0 77 1159.5 78 858.0 79 585.0 80 312.0 81 245.5 82 179.0 83 141.0 84 103.0 85 63.5 86 24.0 87 15.5 88 7.0 89 9.0 90 11.0 91 8.0 92 5.0 93 3.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1049307.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.842890505579454 #Duplication Level Percentage of deduplicated Percentage of total 1 80.12663382220477 17.501972891590782 2 6.581387891161385 2.875130701627692 3 2.0287990274783847 1.3294450504510933 4 1.0090115042817533 0.8815891122758543 5 0.6848565998058107 0.7479623860790885 6 0.49704509954018106 0.651414101135461 7 0.39593750114777027 0.6053893639236441 8 0.3051512848300161 0.5332308881743144 9 0.26610037560355637 0.5231161231021842 >10 5.4107396178732365 32.30082755968209 >50 2.54070123068609 36.75380684209137 >100 0.1514412447386731 4.495599664367353 >500 0.0013168803890319398 0.1621357526061636 >1k 8.779202593546266E-4 0.6383795628928667 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4885 0.4655453551725091 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1773 0.16896866217417783 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9060198778813066E-4 0.0 0.0 0.0637563649151297 0.0 2 1.9060198778813066E-4 0.0 0.0 0.24196922349703184 0.0 3 1.9060198778813066E-4 0.0 0.0 0.34699091876829186 0.0 4 1.9060198778813066E-4 0.0 0.0 0.5232977574723127 0.0 5 1.9060198778813066E-4 0.0 0.0 0.936713468984768 0.0 6 1.9060198778813066E-4 0.0 0.0 1.3388836632177237 0.0 7 1.9060198778813066E-4 0.0 0.0 1.5982929685973695 0.0 8 1.9060198778813066E-4 0.0 0.0 2.2064086106354 0.0 9 1.9060198778813066E-4 0.0 0.0 2.4475201251873857 0.0 10 1.9060198778813066E-4 0.0 0.0 2.8267227798918717 0.0 11 1.9060198778813066E-4 0.0 0.0 3.2118340962177894 0.0 12 1.9060198778813066E-4 0.0 0.0 3.5372869903660225 0.0 13 1.9060198778813066E-4 0.0 0.0 3.6863377448163406 0.0 14 1.9060198778813066E-4 0.0 0.0 3.7400875053725935 0.0 15 1.9060198778813066E-4 0.0 0.0 3.8287174296940742 0.0 16 1.9060198778813066E-4 0.0 0.0 4.013410755860773 0.0 17 1.9060198778813066E-4 0.0 0.0 4.211922726142111 0.0 18 1.9060198778813066E-4 0.0 0.0 4.506593399262561 0.0 19 1.9060198778813066E-4 0.0 0.0 4.648782482152506 0.0 20 1.9060198778813066E-4 0.0 0.0 4.8046949081631976 0.0 21 1.9060198778813066E-4 0.0 0.0 4.999490139682667 0.0 22 1.9060198778813066E-4 0.0 0.0 5.1995269258663095 0.0 23 1.9060198778813066E-4 0.0 0.0 5.418338007847084 0.0 24 1.9060198778813066E-4 0.0 0.0 5.574822239821139 0.0 25 1.9060198778813066E-4 0.0 0.0 5.711579166059122 0.0 26 1.9060198778813066E-4 0.0 0.0 5.858342696655983 0.0 27 1.9060198778813066E-4 0.0 0.0 6.0027237024054925 0.0 28 1.9060198778813066E-4 0.0 0.0 6.148820126045094 0.0 29 2.8590298168219597E-4 0.0 0.0 6.295107151672485 0.0 30 2.8590298168219597E-4 0.0 0.0 6.499718385563043 0.0 31 2.8590298168219597E-4 0.0 0.0 6.674595709358653 0.0 32 2.8590298168219597E-4 0.0 0.0 6.83346246618006 0.0 33 2.8590298168219597E-4 0.0 0.0 6.9990955935679455 0.0 34 2.8590298168219597E-4 0.0 0.0 7.166539439839818 0.0 35 3.812039755762613E-4 0.0 0.0 7.384683414863334 0.0 36 3.812039755762613E-4 0.0 0.0 7.555558096915393 0.0 37 3.812039755762613E-4 0.0 0.0 7.75054393042265 0.0 38 3.812039755762613E-4 0.0 0.0 7.9489605997100945 0.0 39 3.812039755762613E-4 0.0 0.0 8.2170422955341 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGTAT 20 7.033004E-4 45.000004 21 TCGATCT 20 7.033004E-4 45.000004 29 TTGTACG 45 3.8562575E-10 45.0 1 CACGACC 70 0.0 45.0 27 ATATGCG 60 0.0 44.999996 1 TAGTACG 30 2.1653213E-6 44.999996 1 CGTTTTT 3210 0.0 42.33645 1 CGTTAGG 245 0.0 42.2449 2 ATTAGCG 70 0.0 41.785713 1 GACCGAT 325 0.0 40.84615 9 TCGTTAG 85 0.0 39.705883 1 CGTAGCA 40 3.4578443E-7 39.375004 30 ACATCGT 40 3.4578443E-7 39.375004 26 TACAACG 40 3.4578443E-7 39.375004 1 GCGTTAG 120 0.0 39.374996 1 TTTAGCG 75 0.0 39.000004 1 TACGTAG 110 0.0 38.863636 1 TATCTAG 35 6.24777E-6 38.571426 1 CTCTATA 35 6.24777E-6 38.571426 32 TATCGCG 35 6.24777E-6 38.571426 1 >>END_MODULE