##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547068_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 970691 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.66456781818313 31.0 31.0 33.0 30.0 34.0 2 32.05702638635776 33.0 31.0 34.0 30.0 34.0 3 32.11385394528228 33.0 31.0 34.0 30.0 34.0 4 35.81431681142609 37.0 35.0 37.0 35.0 37.0 5 35.76065812910597 37.0 35.0 37.0 35.0 37.0 6 35.8216620943225 37.0 35.0 37.0 35.0 37.0 7 36.116531419370325 37.0 35.0 37.0 35.0 37.0 8 36.066077670443015 37.0 35.0 37.0 35.0 37.0 9 37.86339525142399 39.0 38.0 39.0 35.0 39.0 10 37.417192494831 39.0 37.0 39.0 35.0 39.0 11 37.14369969434146 39.0 37.0 39.0 33.0 39.0 12 36.522727623929754 39.0 35.0 39.0 33.0 39.0 13 36.26771959356788 39.0 35.0 39.0 32.0 39.0 14 37.313297434507994 40.0 35.0 41.0 32.0 41.0 15 37.50237511216237 40.0 35.0 41.0 33.0 41.0 16 37.61599108264113 40.0 35.0 41.0 33.0 41.0 17 37.597732955183474 40.0 35.0 41.0 33.0 41.0 18 37.48618767455349 39.0 35.0 41.0 33.0 41.0 19 37.40979158146104 39.0 35.0 41.0 33.0 41.0 20 37.2070051128526 39.0 35.0 41.0 33.0 41.0 21 37.12627705418099 39.0 35.0 41.0 32.0 41.0 22 37.062756325133336 39.0 35.0 41.0 32.0 41.0 23 37.02332771190832 38.0 35.0 41.0 32.0 41.0 24 36.95876030580278 38.0 35.0 41.0 32.0 41.0 25 36.84897047567146 38.0 35.0 41.0 32.0 41.0 26 36.71064427299728 38.0 35.0 41.0 32.0 41.0 27 36.616559749704074 38.0 35.0 41.0 31.0 41.0 28 36.64213431462741 38.0 35.0 41.0 31.0 41.0 29 36.65065710921395 38.0 35.0 41.0 31.0 41.0 30 36.584244625735685 38.0 35.0 41.0 31.0 41.0 31 36.43005343616043 38.0 35.0 41.0 31.0 41.0 32 36.28470852207345 38.0 35.0 41.0 31.0 41.0 33 36.10903984893236 38.0 35.0 41.0 30.0 41.0 34 35.91194417172921 38.0 35.0 41.0 30.0 41.0 35 35.80438162092777 38.0 35.0 41.0 29.0 41.0 36 35.69968403951412 38.0 35.0 41.0 29.0 41.0 37 35.63296455823738 38.0 35.0 41.0 29.0 41.0 38 35.56254874105148 38.0 35.0 41.0 28.0 41.0 39 35.49783916818019 38.0 35.0 41.0 28.0 41.0 40 35.38336298574933 38.0 35.0 40.0 27.0 41.0 41 35.342231461917336 38.0 35.0 40.0 27.0 41.0 42 35.26072148603418 38.0 35.0 40.0 27.0 41.0 43 35.14702310003904 37.0 34.0 40.0 27.0 41.0 44 34.94769396234229 37.0 34.0 40.0 26.0 41.0 45 34.88251153044584 37.0 34.0 40.0 26.0 41.0 46 34.86203333501599 37.0 34.0 40.0 26.0 41.0 47 34.837496175404944 37.0 34.0 40.0 26.0 41.0 48 34.753091354509316 36.0 34.0 40.0 26.0 41.0 49 34.693886107937544 36.0 34.0 40.0 26.0 41.0 50 34.59469594340526 36.0 34.0 40.0 25.0 41.0 51 34.23057904111607 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 4.0 12 1.0 13 3.0 14 9.0 15 21.0 16 54.0 17 134.0 18 320.0 19 668.0 20 1145.0 21 1914.0 22 2892.0 23 4476.0 24 6727.0 25 10659.0 26 14688.0 27 17196.0 28 17891.0 29 18491.0 30 20763.0 31 25160.0 32 31000.0 33 40758.0 34 74957.0 35 130102.0 36 62394.0 37 83036.0 38 129039.0 39 275927.0 40 259.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.31935703534904 22.920167179874955 28.21217050534104 15.54830527943496 2 32.70937919482101 24.00568254985366 29.793930303258193 13.491007952067136 3 28.765384658969744 24.245923780070076 33.47738878798712 13.51130277297307 4 26.105732926338042 26.072766719790337 32.99711236634521 14.82438798752641 5 23.436706428719333 31.093829035192456 31.264223115285915 14.205241420802295 6 21.458940074647852 39.543582870347 28.116774545143613 10.880702509861532 7 85.93939781042576 3.724872281704476 8.549270571170434 1.7864593366993204 8 87.2742201174215 2.7122946437125717 8.097427502675929 1.9160577361899924 9 83.23400546620913 4.093475678666023 9.81888160083899 2.8536372542858643 10 46.86784981008375 24.275696385358472 16.00447516253885 12.851978642018933 11 39.146340081447136 22.173276562778472 23.873920743058296 14.806462612716095 12 36.067399409286786 20.538976873175912 26.718595309939 16.6750284075983 13 23.931611604516785 29.88520548763716 27.869734034826738 18.313448873019322 14 17.889421041299443 32.74368465350971 30.76797868734747 18.59891561784337 15 17.704501226445903 23.648720344579274 41.26586112367375 17.380917305301068 16 20.697214664604903 21.164201584232263 38.99067777490468 19.14790597625815 17 21.110940556778623 21.06262446030714 29.297582855924286 28.52885212698995 18 23.56187499420516 23.785427082356794 32.16440659282923 20.488291330608813 19 27.52400094365766 24.938523175758302 27.062268013198842 20.475207867385194 20 29.47673358463198 24.344925419108655 26.615987992059264 19.5623530042001 21 24.781933694656693 25.935544885035505 29.39153654458525 19.890984875722552 22 23.60071330629418 23.508716986146982 28.94608067860936 23.94448902894948 23 21.915625054729055 27.412121880186387 28.27841197662284 22.393841088461723 24 22.155557226759083 23.576709787151625 33.85443977537651 20.41329321071278 25 20.70267469256437 25.224401998164193 32.228690695597265 21.844232613674176 26 19.82639171476814 29.700079633992694 28.246063886447903 22.227464764791264 27 20.15172696563582 28.14448676252278 30.4552118027261 21.2485744691153 28 18.594485783838525 26.87971764444092 34.6876606458698 19.83813592585076 29 19.68381287144931 25.407982560876736 33.979505321466874 20.92869924620708 30 22.183166424742787 26.061949683266867 31.448215755580307 20.306668136410043 31 27.63505585196525 25.06595816794428 26.7003608769423 20.59862510314817 32 27.96574811139693 26.1200526223072 27.108008624783785 18.806190641512078 33 26.609394750749725 25.759278699400735 27.07318806911777 20.558138480731767 34 21.437306001600923 26.49658851271929 29.974935381084194 22.09117010459559 35 21.982587661779082 26.544492531608928 29.69729811031523 21.775621696296763 36 27.08482926080493 26.1302515424579 26.56612660465586 20.21879259208131 37 22.699293596005322 28.76445748441059 27.880138993768355 20.656109925815734 38 22.096733151950517 29.921674353630557 25.63029841628283 22.351294078136092 39 22.707329108851322 27.6448426945341 27.1010033058924 22.546824890722174 40 24.027728700482438 25.133847949553463 27.24327309102485 23.595150258939253 41 19.905304571691712 24.619884185595623 27.95719750157362 27.517613741139048 42 22.630785698023367 26.26015900013495 25.86817020040363 25.24088510143805 43 22.750803293736112 26.012912451027155 27.30941154291118 23.92687271232555 44 22.200576702575795 28.296852448410466 27.49021058194626 22.01236026706748 45 20.761910844954777 30.157176691655742 25.64564830620661 23.43526415718287 46 22.551975860495254 29.218154902023404 26.567259818005933 21.662609419475405 47 22.13258390157115 26.29312520668266 28.208152748918035 23.36613814282815 48 23.051001812111167 24.37840672263367 29.870679752877074 22.69991171237809 49 22.293706236073067 24.085316542545463 29.948150338264185 23.672826883117285 50 20.09856895757764 28.245033692493287 28.479505836563852 23.176891513365224 51 20.052828345992697 28.512162984925173 27.14931940236388 24.285689266718244 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 412.0 1 784.0 2 1156.0 3 7722.0 4 14288.0 5 9798.0 6 5308.0 7 5235.5 8 5163.0 9 5277.5 10 5392.0 11 5433.5 12 5475.0 13 5224.0 14 4973.0 15 4688.0 16 4403.0 17 4194.0 18 3985.0 19 3938.0 20 3891.0 21 3844.5 22 3798.0 23 3924.0 24 4050.0 25 4538.5 26 5738.5 27 6450.0 28 7602.0 29 8754.0 30 10650.0 31 12546.0 32 14648.0 33 16750.0 34 18995.5 35 21241.0 36 22816.0 37 24391.0 38 30722.5 39 37054.0 40 44592.5 41 52131.0 42 61481.5 43 70832.0 44 73361.5 45 75891.0 46 76152.0 47 76413.0 48 76847.5 49 77282.0 50 74686.5 51 72091.0 52 69068.0 53 66045.0 54 60365.0 55 54685.0 56 52423.5 57 50162.0 58 47258.0 59 44354.0 60 41882.0 61 39410.0 62 35704.5 63 31999.0 64 27287.5 65 22576.0 66 19227.5 67 15879.0 68 13055.5 69 10232.0 70 8317.5 71 6403.0 72 5469.0 73 4535.0 74 3658.0 75 2079.5 76 1378.0 77 986.5 78 595.0 79 445.0 80 295.0 81 211.0 82 127.0 83 92.5 84 58.0 85 38.5 86 19.0 87 14.0 88 9.0 89 5.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 970691.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.298779044338882 #Duplication Level Percentage of deduplicated Percentage of total 1 76.92866835873626 20.231300513416286 2 6.363000100314036 3.3467826739452993 3 2.414087865152859 1.904626900778244 4 1.4374325709538438 1.5121088629860444 5 1.0326575144514862 1.3578815900517913 6 0.8169563843810244 1.2890973265019126 7 0.658946650068332 1.2130644646508049 8 0.5720971774420706 1.203636580915116 9 0.5077734995306642 1.2018440761854885 >10 8.68612391540034 55.57431675471396 >50 0.5502812297396673 8.802628832063618 >100 0.031185234228681205 1.3870639014577633 >500 3.947498003630531E-4 0.07516160950942448 >1k 0.0 0.0 >5k 3.947498003630531E-4 0.9004859128242374 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8674 0.8935902362337758 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0301939546158355E-4 0.0 0.0 0.05604255113110145 0.0 2 1.0301939546158355E-4 0.0 0.0 0.15257172467860525 0.0 3 1.0301939546158355E-4 0.0 0.0 0.24776164608510845 0.0 4 1.0301939546158355E-4 0.0 0.0 0.3521202936876926 0.0 5 1.0301939546158355E-4 0.0 0.0 0.6202797800741946 0.0 6 1.0301939546158355E-4 0.0 0.0 1.0190678599059846 0.0 7 1.0301939546158355E-4 0.0 0.0 1.2807371243784067 0.0 8 1.0301939546158355E-4 0.0 0.0 1.8530098661675034 0.0 9 1.0301939546158355E-4 0.0 0.0 2.156401985801867 0.0 10 1.0301939546158355E-4 0.0 0.0 2.612777907696682 0.0 11 1.0301939546158355E-4 0.0 0.0 2.9980704467230046 0.0 12 1.0301939546158355E-4 0.0 0.0 3.316812456281144 0.0 13 1.0301939546158355E-4 0.0 0.0 3.4727838210099815 0.0 14 1.0301939546158355E-4 0.0 0.0 3.550357425792554 0.0 15 1.0301939546158355E-4 0.0 0.0 3.637202776166669 0.0 16 1.0301939546158355E-4 0.0 0.0 3.794822451222892 0.0 17 1.0301939546158355E-4 0.0 0.0 3.978299994539972 0.0 18 1.0301939546158355E-4 0.0 0.0 4.230388455234467 0.0 19 1.0301939546158355E-4 0.0 0.0 4.361429126261601 0.0 20 1.0301939546158355E-4 0.0 0.0 4.505244202325972 0.0 21 1.0301939546158355E-4 0.0 0.0 4.675947340605816 0.0 22 1.0301939546158355E-4 0.0 0.0 4.85839468996828 0.0 23 1.0301939546158355E-4 0.0 0.0 5.0684512373144495 0.0 24 1.0301939546158355E-4 0.0 0.0 5.242554015644526 0.0 25 1.0301939546158355E-4 0.0 0.0 5.381836238308586 0.0 26 1.0301939546158355E-4 0.0 0.0 5.522972810090955 0.0 27 1.0301939546158355E-4 0.0 0.0 5.672247914114791 0.0 28 1.0301939546158355E-4 0.0 0.0 5.813693544083544 0.0 29 1.0301939546158355E-4 0.0 0.0 5.980791003522233 0.0 30 1.0301939546158355E-4 0.0 0.0 6.186726775049939 0.0 31 1.0301939546158355E-4 0.0 0.0 6.354133292675012 0.0 32 1.0301939546158355E-4 0.0 0.0 6.51731601508616 0.0 33 1.0301939546158355E-4 0.0 0.0 6.688431230947851 0.0 34 1.0301939546158355E-4 0.0 0.0 6.861297776532388 0.0 35 1.0301939546158355E-4 0.0 0.0 7.05919803521409 0.0 36 1.0301939546158355E-4 0.0 0.0 7.233197794148705 0.0 37 1.0301939546158355E-4 0.0 0.0 7.426874257616482 0.0 38 1.0301939546158355E-4 0.0 0.0 7.662582634432584 0.0 39 1.0301939546158355E-4 0.0 0.0 7.967932122580718 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 45 3.8380676E-10 45.0 1 TCGATAG 40 6.8139343E-9 45.0 1 ATCGCGC 25 3.8903563E-5 45.0 10 CGTTTTT 5335 0.0 43.3552 1 TAACGAG 50 1.0804797E-9 40.5 1 CACGCGG 240 0.0 39.374996 37 CGGGATC 120 0.0 39.374996 6 TTACACG 240 0.0 39.374996 34 TGCGGGC 275 0.0 39.272728 4 GACCGAT 195 0.0 39.23077 9 GTACGGG 425 0.0 39.17647 3 TACGGGT 75 0.0 39.0 4 AACGGGA 180 0.0 38.75 4 AGGGCGA 750 0.0 38.4 6 TAGGGAG 915 0.0 38.360657 5 GGGCGAT 1275 0.0 38.117645 7 TGCGTTG 65 9.094947E-12 38.07692 1 TATCGGG 95 0.0 37.894737 3 CGGGATT 245 0.0 37.65306 6 GTTTTTT 6485 0.0 37.60987 2 >>END_MODULE