SRR1547066_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547066_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	958191
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5459	0.5697193983245512	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1023	0.10676368281480415	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTAACG	20	7.032698E-4	45.0	1
CCGATTA	20	7.032698E-4	45.0	11
CACTCGA	20	7.032698E-4	45.0	38
CACTACG	20	7.032698E-4	45.0	1
TCGAGTA	20	7.032698E-4	45.0	35
TATCGCG	20	7.032698E-4	45.0	1
TACGTAG	25	3.8903177E-5	45.0	1
CGTTTTT	3010	0.0	43.056477	1
ACTACGG	60	3.6379788E-12	41.250004	2
ATTAGCG	55	6.002665E-11	40.909092	1
GCGTAAG	45	1.927765E-8	40.0	1
GGGCGAT	1400	0.0	39.696426	7
TCGTTAG	40	3.457426E-7	39.375	1
ATGGTCG	40	3.457426E-7	39.375	44
ATACGAG	40	3.457426E-7	39.375	1
CTAGACG	35	6.247201E-6	38.571426	1
TAGGGCG	310	0.0	38.46774	5
ATAGGGA	965	0.0	38.238342	4
TATAGCG	65	9.094947E-12	38.076927	1
TCACGAC	95	0.0	37.894737	25