##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547064_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 872557 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.685408517724344 31.0 31.0 33.0 30.0 34.0 2 32.0775147067756 33.0 31.0 34.0 30.0 34.0 3 32.1729640585085 33.0 31.0 34.0 30.0 34.0 4 35.82927075251244 37.0 35.0 37.0 35.0 37.0 5 35.76940761463148 37.0 35.0 37.0 35.0 37.0 6 35.82421664143431 37.0 35.0 37.0 35.0 37.0 7 36.13964130710085 37.0 35.0 37.0 35.0 37.0 8 36.08972365129155 37.0 35.0 37.0 35.0 37.0 9 37.89220532297603 39.0 38.0 39.0 35.0 39.0 10 37.436724477598595 39.0 37.0 39.0 35.0 39.0 11 37.13454479191617 39.0 37.0 39.0 33.0 39.0 12 36.267341847008275 38.0 35.0 39.0 33.0 39.0 13 35.87653070229223 38.0 35.0 39.0 31.0 39.0 14 36.83701236710037 39.0 35.0 41.0 31.0 41.0 15 37.11525206949231 39.0 35.0 41.0 32.0 41.0 16 37.2819563650283 39.0 35.0 41.0 33.0 41.0 17 37.27807008596573 39.0 35.0 41.0 33.0 41.0 18 37.207701044172474 39.0 35.0 41.0 33.0 41.0 19 37.1566052418352 38.0 35.0 41.0 32.0 41.0 20 36.994521847856355 38.0 35.0 41.0 32.0 41.0 21 36.89974064731588 38.0 35.0 41.0 32.0 41.0 22 36.82595520980291 38.0 35.0 41.0 32.0 41.0 23 36.804583540101106 38.0 35.0 41.0 32.0 41.0 24 36.71526444690719 38.0 35.0 41.0 32.0 41.0 25 36.62139206951523 38.0 35.0 41.0 32.0 41.0 26 36.48259999060233 38.0 35.0 41.0 31.0 41.0 27 36.39985353392386 38.0 35.0 40.0 31.0 41.0 28 36.48154561822322 38.0 35.0 41.0 31.0 41.0 29 36.51206511437075 38.0 35.0 41.0 31.0 41.0 30 36.49454304990963 38.0 35.0 40.0 31.0 41.0 31 36.33459819816929 38.0 35.0 40.0 31.0 41.0 32 36.23870073817527 38.0 35.0 41.0 31.0 41.0 33 36.12341314091802 38.0 35.0 41.0 31.0 41.0 34 36.00480885489429 38.0 35.0 41.0 30.0 41.0 35 35.92856970948603 38.0 35.0 41.0 30.0 41.0 36 35.81306206929748 38.0 35.0 41.0 30.0 41.0 37 35.73412510586701 37.0 35.0 40.0 30.0 41.0 38 35.67278240848449 37.0 35.0 40.0 30.0 41.0 39 35.63992954041971 37.0 35.0 40.0 30.0 41.0 40 35.49282854873665 37.0 35.0 40.0 29.0 41.0 41 35.48594303867827 37.0 35.0 40.0 29.0 41.0 42 35.42098453166957 37.0 35.0 40.0 29.0 41.0 43 35.29842749528111 36.0 34.0 40.0 29.0 41.0 44 35.17193604543886 36.0 34.0 40.0 28.0 41.0 45 35.07139247063515 36.0 34.0 40.0 28.0 41.0 46 35.03590252556567 36.0 34.0 40.0 28.0 41.0 47 34.977818068045984 35.0 34.0 40.0 28.0 41.0 48 34.92753482007479 35.0 34.0 40.0 28.0 41.0 49 34.87579264162685 36.0 34.0 40.0 28.0 41.0 50 34.74281221742534 35.0 34.0 40.0 28.0 41.0 51 34.366561726053426 35.0 34.0 39.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 1.0 13 7.0 14 13.0 15 26.0 16 62.0 17 144.0 18 297.0 19 587.0 20 1035.0 21 1620.0 22 2462.0 23 3736.0 24 5464.0 25 7730.0 26 10817.0 27 12907.0 28 14363.0 29 15707.0 30 18617.0 31 23165.0 32 29367.0 33 39346.0 34 77058.0 35 143060.0 36 53513.0 37 71818.0 38 109638.0 39 229765.0 40 229.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.104312956059026 23.179918331982897 30.229772954660845 13.485995757297232 2 31.189824848118803 24.56378207956615 30.646937678569998 13.59945539374505 3 29.850428109567627 24.55071703052064 31.852704178638184 13.746150681273544 4 26.262353061175375 27.42239188958429 31.213662832342187 15.101592216898151 5 24.517481379439968 30.697249577964534 29.86601448386753 14.919254558727967 6 21.85668099619853 40.148666505454656 26.487667854363668 11.506984643983143 7 88.30907321813933 4.183680836896615 5.811196288609226 1.6960496563548282 8 89.69740658776448 2.7527141493335106 5.5331628764653775 2.0167163864366455 9 86.33567778380095 3.8430727161663936 7.132943750379632 2.6883057496530314 10 53.015218490024154 20.908318883465494 12.729598180978435 13.346864445531924 11 45.76617917224892 20.425599702942044 18.91773259511986 14.890488529689177 12 40.606172433434146 20.953473526657856 22.40885122691125 16.031502812996745 13 23.605907694282436 35.134208997234566 24.16804862031936 17.091834688163637 14 17.33078755886435 37.49256495564187 27.0347954345676 18.141852050926186 15 16.442822646543434 22.49010666351883 44.625967128795025 16.44110356114271 16 18.983974685894445 19.12024085532521 42.121374305632756 19.77441015314759 17 20.528859432678896 18.958761433350485 27.03834821106243 33.474030922908184 18 24.616615304215085 23.36030769336559 30.608430165593763 21.41464683682556 19 29.02824686524777 24.576159494451367 24.744171440948843 21.65142219935202 20 31.03957678409548 24.11005813946825 23.572328226121616 21.27803685031465 21 24.609165934145278 26.356100518361554 27.25048334951184 21.784250197981336 22 23.898496029485752 23.45692029288631 26.598720771250473 26.045862906377465 23 21.643858223588833 27.507085496993323 26.011022775589442 24.838033503828402 24 22.68780148460215 23.02256471496991 34.248421593087905 20.04121220734004 25 20.693891631148453 23.38632318576322 32.59191090094974 23.327874282138588 26 19.299598765467472 31.471525642450864 26.280804577809818 22.948071014271846 27 19.664274081807836 29.686656573725266 29.160731046796943 21.48833829766995 28 17.79688891384746 26.563766034769078 35.731533871139646 19.90781118024381 29 18.755450933291463 24.48539178529311 34.35110829435784 22.40804898705758 30 21.89175033837331 26.731777981266553 30.352515652272572 21.02395602808756 31 28.901722179754447 24.80147428763966 24.500405131126104 21.796398401479788 32 30.34655615621673 25.469281662974453 25.145979001944855 19.03818317886396 33 28.151398705184878 25.952803083351572 25.36934549834567 20.526452713117884 34 21.931518513976737 26.556660481779414 28.18348829933173 23.328332704912114 35 22.096092289672768 25.658724874134297 29.327826147747366 22.91735668844557 36 29.646544581041695 24.68022146404189 25.148156510119108 20.5250774447973 37 22.71163946882553 29.60689101113165 27.07295913046368 20.60851038957913 38 22.977639283164308 29.87403688240424 23.49474017170225 23.653583662729197 39 22.808252068346253 28.11804844841082 25.733103969138977 23.34059551410395 40 24.42591143042804 24.402531868978187 25.473178256549428 25.698378444044344 41 19.45580632554664 23.839015674620683 26.62828904014294 30.07688895968974 42 24.115100789977046 25.66216304493575 24.07762472824125 26.14511143684596 43 23.782285856396772 25.84129174369124 25.035957536298486 25.340464863613494 44 21.94790712813031 28.811985921836623 26.876066549234036 22.36404040079903 45 20.46605551270576 32.36911743301584 22.65399280505457 24.510834249223834 46 23.203870921899657 29.373668425100025 25.972400656919838 21.450059996080487 47 23.390678202111726 26.40377648680831 26.26567662628344 23.939868684796522 48 24.576044888757984 23.50665916381394 28.53200421290529 23.385291734522788 49 22.840112451106346 22.79266569404635 30.009042389207814 24.35817946563949 50 20.762655047177432 28.847628292478312 27.209110694201065 23.180605966143187 51 20.59865429994831 30.951674217271762 24.339957160391815 24.109714322388108 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 397.0 1 764.5 2 1132.0 3 3456.5 4 5781.0 5 4198.5 6 2616.0 7 2690.0 8 2764.0 9 2976.0 10 3188.0 11 3169.0 12 3150.0 13 2998.5 14 2847.0 15 2654.5 16 2462.0 17 2449.0 18 2436.0 19 2318.0 20 2200.0 21 2279.0 22 2358.0 23 2365.0 24 2372.0 25 2721.0 26 3616.5 27 4163.0 28 4811.0 29 5459.0 30 7297.0 31 9135.0 32 9828.5 33 10522.0 34 12194.0 35 13866.0 36 16313.0 37 18760.0 38 23824.5 39 28889.0 40 39114.5 41 49340.0 42 60331.0 43 71322.0 44 72410.0 45 73498.0 46 74771.0 47 76044.0 48 75402.0 49 74760.0 50 73401.0 51 72042.0 52 67480.0 53 62918.0 54 57939.5 55 52961.0 56 49083.5 57 45206.0 58 43284.0 59 41362.0 60 39052.5 61 36743.0 62 33082.5 63 29422.0 64 25198.0 65 20974.0 66 17652.0 67 14330.0 68 11733.0 69 9136.0 70 7483.0 71 5830.0 72 4817.5 73 3805.0 74 2962.0 75 1985.5 76 1852.0 77 1261.5 78 671.0 79 540.0 80 409.0 81 257.5 82 106.0 83 84.0 84 62.0 85 61.5 86 61.0 87 34.5 88 8.0 89 6.5 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 872557.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.038125359751078 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77911518530344 17.361440161839866 2 6.108663978781033 2.692470050899444 3 1.9992397135797628 1.3217848629619098 4 1.1361212930949247 1.0015193392443378 5 0.7315325979236398 0.8060803548892777 6 0.5125605734125146 0.6777524502798536 7 0.4245864298012332 0.6549962276206109 8 0.3843605871686046 0.6776469442695392 9 0.3303022732289696 0.6551318613627707 >10 7.741466573005599 47.17473822888826 >50 1.7772151734394197 24.137214929674684 >100 0.07378896921523599 2.3230019356931666 >500 0.0 0.0 >1k 0.0010466520456061843 0.5162226523762592 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3252 0.37269771487707964 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1224 0.14027736869912225 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04836360260705031 0.0 2 0.0 0.0 0.0 0.17293999131288845 0.0 3 0.0 0.0 0.0 0.2568313588682459 0.0 4 0.0 0.0 0.0 0.3874818493233107 0.0 5 0.0 0.0 0.0 0.6675781639480286 0.0 6 0.0 0.0 0.0 0.994089784392309 0.0 7 0.0 0.0 0.0 1.190180125768288 0.0 8 0.0 0.0 0.0 1.693986753873959 0.0 9 0.0 0.0 0.0 1.918040884435057 0.0 10 0.0 0.0 0.0 2.2923430790194796 0.0 11 0.0 0.0 0.0 2.661831834481873 0.0 12 0.0 0.0 0.0 2.9650784991696817 0.0 13 0.0 0.0 0.0 3.097791892105616 0.0 14 0.0 0.0 0.0 3.152229596461893 0.0 15 0.0 0.0 0.0 3.228900805334207 0.0 16 0.0 0.0 0.0 3.394047609497145 0.0 17 0.0 0.0 0.0 3.580854889709211 0.0 18 0.0 0.0 0.0 3.841468236459051 0.0 19 0.0 0.0 0.0 3.9686805561126666 0.0 20 0.0 0.0 0.0 4.114458998094108 0.0 21 0.0 0.0 0.0 4.313758298884772 0.0 22 0.0 0.0 0.0 4.506639680846065 0.0 23 0.0 0.0 0.0 4.741352140891655 0.0 24 0.0 0.0 0.0 4.896184432650245 0.0 25 0.0 0.0 0.0 5.025803471864875 0.0 26 0.0 0.0 0.0 5.154276454145689 0.0 27 1.1460569338163582E-4 0.0 0.0 5.290198806496309 0.0 28 1.1460569338163582E-4 0.0 0.0 5.427496427167509 0.0 29 1.1460569338163582E-4 0.0 0.0 5.574993954549674 0.0 30 1.1460569338163582E-4 0.0 0.0 5.7697090276050735 0.0 31 1.1460569338163582E-4 0.0 0.0 5.934855831768011 0.0 32 1.1460569338163582E-4 0.0 0.0 6.08338481039061 0.0 33 1.1460569338163582E-4 0.0 0.0 6.2269857441978 0.0 34 3.438170801449074E-4 0.0 0.0 6.384453966904168 0.0 35 3.438170801449074E-4 0.0 0.0 6.591317243458021 0.0 36 3.438170801449074E-4 0.0 0.0 6.756922470394485 0.0 37 3.438170801449074E-4 0.0 0.0 6.928372587693412 0.0 38 3.438170801449074E-4 0.0 0.0 7.119878701334125 0.0 39 3.438170801449074E-4 0.0 0.0 7.358831572034836 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGCG 45 3.8380676E-10 45.000004 1 AACGTAG 25 3.8900307E-5 45.0 1 TTATACG 25 3.8900307E-5 45.0 1 ACATACG 20 7.032352E-4 45.0 17 ATAGCGG 130 0.0 41.538464 2 CGGTCTA 65 0.0 41.538464 31 CGTTTTT 2475 0.0 41.454544 1 GCGGGAT 330 0.0 40.90909 5 TTGCGAG 45 1.9274012E-8 40.000004 1 CGTATGG 85 0.0 39.705883 2 GGACCGA 245 0.0 39.489796 8 ATGGGCG 200 0.0 39.375 5 CTAAGCG 80 0.0 39.375 1 TCTAGCG 40 3.456953E-7 39.375 1 TATAGCG 40 3.456953E-7 39.375 1 AGGGCGA 505 0.0 38.762375 6 CACGACG 70 0.0 38.57143 26 TATGGGC 380 0.0 38.486843 4 GGGCGAT 995 0.0 37.989952 7 TAGCGGG 665 0.0 37.894737 3 >>END_MODULE