SRR1547063_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547063_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1242378
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9895	0.796456472989702	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1378	0.11091632337340165	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCAAG	20	7.0335064E-4	45.000004	1
CGCAACC	20	7.0335064E-4	45.000004	35
TCGACTA	20	7.0335064E-4	45.000004	45
ACGCGTA	25	3.890988E-5	45.000004	32
TAATGCG	35	1.212029E-7	45.0	1
CGTTTTT	6155	0.0	43.281887	1
TATAGCG	55	6.184564E-11	40.909092	1
CGAATAT	50	1.0822987E-9	40.500004	14
TATCGTG	50	1.0822987E-9	40.500004	1
CACGACC	160	0.0	39.375004	27
GCGATCG	40	3.4585173E-7	39.375004	9
CGTAAGG	160	0.0	39.375004	2
GCGTAAG	75	0.0	39.0	1
TAAGGGA	1035	0.0	38.695652	4
CTATGCG	35	6.248698E-6	38.571426	1
CCGGATA	35	6.248698E-6	38.571426	20
ATCGTAG	35	6.248698E-6	38.571426	1
GCGTTAG	30	1.139975E-4	37.500004	1
GCACCGT	30	1.139975E-4	37.500004	39
TTCTCGT	30	1.139975E-4	37.500004	31