##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547063_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1242378 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.68490427229072 31.0 31.0 33.0 30.0 34.0 2 32.068270687343144 33.0 31.0 34.0 30.0 34.0 3 32.13238241501379 33.0 31.0 34.0 30.0 34.0 4 35.82979012828624 37.0 35.0 37.0 35.0 37.0 5 35.78087264906494 37.0 35.0 37.0 35.0 37.0 6 35.84549307859605 37.0 35.0 37.0 35.0 37.0 7 36.153363147125916 37.0 35.0 37.0 35.0 37.0 8 36.105173304743 37.0 35.0 37.0 35.0 37.0 9 37.89940018255314 39.0 38.0 39.0 35.0 39.0 10 37.411767594081674 39.0 37.0 39.0 35.0 39.0 11 37.156429846632825 39.0 37.0 39.0 34.0 39.0 12 36.47329154250961 38.0 35.0 39.0 33.0 39.0 13 36.175146372521084 39.0 35.0 39.0 32.0 39.0 14 37.21388820471708 39.0 35.0 41.0 32.0 41.0 15 37.431751045173044 39.0 35.0 41.0 33.0 41.0 16 37.55328732479165 39.0 35.0 41.0 33.0 41.0 17 37.5451915600566 39.0 35.0 41.0 33.0 41.0 18 37.42860224504941 39.0 35.0 41.0 33.0 41.0 19 37.35071693156189 39.0 35.0 41.0 33.0 41.0 20 37.16569675251815 39.0 35.0 41.0 33.0 41.0 21 37.09482782212821 39.0 35.0 41.0 33.0 41.0 22 37.0124768790175 38.0 35.0 41.0 32.0 41.0 23 36.99079990147926 38.0 35.0 41.0 32.0 41.0 24 36.90734060004282 38.0 35.0 41.0 32.0 41.0 25 36.81088686374034 38.0 35.0 41.0 32.0 41.0 26 36.694481067758765 38.0 35.0 41.0 32.0 41.0 27 36.612185663300544 38.0 35.0 41.0 32.0 41.0 28 36.634609595469335 38.0 35.0 41.0 32.0 41.0 29 36.66176638671966 38.0 35.0 41.0 32.0 41.0 30 36.60265152795687 38.0 35.0 41.0 32.0 41.0 31 36.44367817202172 38.0 35.0 41.0 31.0 41.0 32 36.29428322137063 38.0 35.0 41.0 31.0 41.0 33 36.1161578843154 38.0 35.0 41.0 30.0 41.0 34 35.92679844620558 38.0 35.0 41.0 30.0 41.0 35 35.823219664224574 38.0 35.0 41.0 30.0 41.0 36 35.69429915854917 38.0 35.0 41.0 29.0 41.0 37 35.60165102730409 38.0 35.0 41.0 29.0 41.0 38 35.52128015789076 38.0 35.0 41.0 29.0 41.0 39 35.47320219772082 38.0 35.0 40.0 29.0 41.0 40 35.35408708138747 38.0 35.0 40.0 27.0 41.0 41 35.34485961599449 38.0 35.0 40.0 28.0 41.0 42 35.25355970566124 37.0 35.0 40.0 27.0 41.0 43 35.14560705356985 37.0 34.0 40.0 27.0 41.0 44 35.006238841962755 37.0 34.0 40.0 27.0 41.0 45 34.91797343481613 37.0 34.0 40.0 26.0 41.0 46 34.90230751027465 37.0 34.0 40.0 26.0 41.0 47 34.87633876324275 36.0 34.0 40.0 26.0 41.0 48 34.81670795844743 36.0 34.0 40.0 26.0 41.0 49 34.75287392403922 36.0 34.0 40.0 26.0 41.0 50 34.64422422161371 36.0 34.0 40.0 26.0 41.0 51 34.27070102657967 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 3.0 13 5.0 14 12.0 15 19.0 16 56.0 17 175.0 18 377.0 19 759.0 20 1406.0 21 2313.0 22 3525.0 23 5613.0 24 8337.0 25 13089.0 26 18098.0 27 21063.0 28 21724.0 29 23082.0 30 26200.0 31 31718.0 32 39888.0 33 53424.0 34 100026.0 35 179816.0 36 80367.0 37 102995.0 38 159955.0 39 348081.0 40 250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.37364151651108 23.298062264463795 29.393389129556386 14.934907089468744 2 32.474737962198304 24.590503051406255 30.062187192625757 12.87257179376969 3 28.533505905610046 24.283108683508562 33.6088533441513 13.574532066730093 4 25.25962307767845 27.18415812256817 33.11150068658653 14.444718113166847 5 23.436667423280195 31.203144292638797 31.43326749185836 13.926920792222658 6 21.293519363671926 40.821070559845715 27.54821801416316 10.337192062319197 7 86.38916658215132 3.6711049294176163 8.267451612955155 1.6722768754759019 8 87.83655216045358 2.4881316314358433 7.7230923277778585 1.952223880332717 9 83.51773775775166 3.9401051853783633 9.698658540315428 2.843498516554543 10 47.48554787673317 23.833648052364094 17.527998725025718 11.152805345877018 11 41.08306811614501 21.352358138988293 22.865424210666962 14.699149534199737 12 35.82645539441297 21.329579242388387 26.302300910028993 16.541664453169645 13 22.928448507620065 33.00959933289224 27.45090463610914 16.611047523378552 14 17.347135895838463 35.20039794651869 30.34961984194826 17.102846315694578 15 17.18945441725465 23.54452509622675 43.27233740455803 15.993683081960564 16 19.632350218693507 20.711329402162626 40.88320945799105 18.77311092115282 17 20.39282730376745 20.7008655980708 29.512917968605368 29.393389129556386 18 23.458882884275155 23.190848517922888 33.279484987660766 20.070783610141195 19 27.026718116386476 25.39452565966236 27.217883768064148 20.360872455887016 20 28.77183916650166 24.72170305655767 26.996292593719463 19.510165183221208 21 24.032862784112403 26.582086933284394 29.32859403498774 20.056456247615458 22 22.947846790590305 23.247996986424422 29.137106420107244 24.66704980287803 23 21.308893106606845 27.63780427534937 28.069476439537727 22.98382617850606 24 21.350184887369224 23.92178547913759 35.414503476397684 19.313526157095506 25 19.14530038361916 25.768566410544942 33.13081847875606 21.95531472707984 26 18.97989178816753 31.0494873540903 28.55990688824174 21.410713969500424 27 19.062475349692285 29.04228825687512 31.023569316262844 20.87166707716975 28 17.05873735690748 27.086683762912738 36.619048308968765 19.235530571211015 29 18.5573955752597 24.80565496169443 35.08119107067253 21.555758392373335 30 20.654502896863917 27.136588059350697 32.325347036087244 19.883562007698142 31 26.861148539333442 25.377864063916135 27.12869996088147 20.632287435868953 32 27.481491140377567 25.722686654142297 27.495094085696948 19.30072811978319 33 25.750616961987415 26.94485897206808 27.12161677041931 20.182907295525194 34 20.298170122136742 27.493323288081406 29.57706913676836 22.631437453013493 35 20.973890394066864 27.432230770345257 30.043915780865404 21.549963054722475 36 27.267868555302815 26.066784827162103 27.06535370072554 19.59999291680954 37 22.35438811698211 29.663757729129138 28.239633992231028 19.742220161657727 38 22.351812411359507 30.520099357844394 25.19128638787873 21.936801842917372 39 22.50852800033484 29.123986419592107 26.963291365429843 21.40419421464321 40 23.92532707436867 26.141802253420455 26.71546019005488 23.217410482155994 41 20.09404545154534 25.310573754525596 27.711292376394304 26.884088417534755 42 22.50321560748822 26.988887440054476 25.55800247589703 24.949894476560274 43 22.594250703087145 26.344558580399845 26.85841185210942 24.202778864403587 44 21.250537276094718 28.96839770182666 27.617198630368534 22.16386639171009 45 20.285372084824427 31.909048614833814 24.726210541397222 23.07936875894454 46 22.907681881037817 29.32883550738986 27.068734314355215 20.69474829721711 47 21.975437427256438 26.32419440782113 28.53374737801217 23.166620786910265 48 23.579055649729792 23.89570645970872 30.023390626685277 22.50184726387621 49 22.16121019528678 23.63523822862285 30.371191376537578 23.832360199552795 50 20.392505340564625 28.85780334165608 28.175321842466623 22.57436947531267 51 19.99117820824258 30.302210760332205 26.10719120911671 23.59941982230851 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 775.0 1 1058.5 2 1342.0 3 8973.5 4 16605.0 5 11502.0 6 6399.0 7 6408.5 8 6418.0 9 6655.5 10 6893.0 11 6993.5 12 7094.0 13 6824.5 14 6555.0 15 6257.0 16 5959.0 17 5635.0 18 5311.0 19 5072.5 20 4834.0 21 4948.0 22 5062.0 23 5396.0 24 5730.0 25 6659.5 26 8874.5 27 10160.0 28 11634.0 29 13108.0 30 14836.5 31 16565.0 32 18820.0 33 21075.0 34 24650.0 35 28225.0 36 30998.5 37 33772.0 38 40465.0 39 47158.0 40 59545.0 41 71932.0 42 85059.0 43 98186.0 44 104424.5 45 110663.0 46 108636.5 47 106610.0 48 104909.0 49 103208.0 50 98835.0 51 94462.0 52 87885.0 53 81308.0 54 74195.0 55 67082.0 56 62457.5 57 57833.0 58 53591.5 59 49350.0 60 46463.0 61 43576.0 62 39557.5 63 35539.0 64 29858.0 65 24177.0 66 20042.0 67 15907.0 68 12547.0 69 9187.0 70 7975.5 71 6764.0 72 5777.5 73 4791.0 74 3690.5 75 1866.5 76 1143.0 77 985.0 78 827.0 79 607.0 80 387.0 81 269.5 82 152.0 83 96.0 84 40.0 85 26.5 86 13.0 87 11.5 88 10.0 89 7.0 90 4.0 91 5.0 92 6.0 93 4.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1242378.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.400423898341973 #Duplication Level Percentage of deduplicated Percentage of total 1 78.40319344839595 19.130711551245692 2 6.8472192657570154 3.3415010521873003 3 2.365906034975154 1.7318733047111778 4 1.330218942224921 1.2983162427156858 5 0.906611466933693 1.1060852052139878 6 0.6893275647743282 1.0091930871183235 7 0.5445871279804415 0.9301709740612366 8 0.45689721373283304 0.8918788554441984 9 0.40637397122056645 0.8924127443130998 >10 6.302763484592429 39.34938153270274 >50 1.6527531359354257 26.16847212252654 >100 0.09281762484161486 3.1455408213504725 >500 6.653593178606485E-4 0.08937394694981571 >1k 3.3267965893032426E-4 0.11185949036952411 >5k 3.3267965893032426E-4 0.8032290690903057 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9895 0.796456472989702 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1378 0.11091632337340165 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04555779319981519 0.0 2 0.0 0.0 0.0 0.160659638209949 0.0 3 0.0 0.0 0.0 0.25121178900463464 0.0 4 0.0 0.0 0.0 0.3761335117009477 0.0 5 0.0 0.0 0.0 0.6937502112883519 0.0 6 0.0 0.0 0.0 1.100953172061965 0.0 7 0.0 0.0 0.0 1.3810611585201926 0.0 8 0.0 0.0 0.0 2.02233136774798 0.0 9 0.0 0.0 0.0 2.3702930992016924 0.0 10 0.0 0.0 0.0 2.8619309099163055 0.0 11 0.0 0.0 0.0 3.268489944284268 0.0 12 0.0 0.0 0.0 3.6174175653464564 0.0 13 0.0 0.0 0.0 3.7900703328616574 0.0 14 0.0 0.0 0.0 3.8566362250458397 0.0 15 0.0 0.0 0.0 3.9491201550574786 0.0 16 0.0 0.0 0.0 4.130546419849676 0.0 17 0.0 0.0 0.0 4.335234526046018 0.0 18 0.0 0.0 0.0 4.6273356418094975 0.0 19 0.0 0.0 0.0 4.787270862813089 0.0 20 0.0 0.0 0.0 4.951391605453413 0.0 21 0.0 0.0 0.0 5.159379834478718 0.0 22 0.0 0.0 0.0 5.372036529944992 0.0 23 0.0 0.0 0.0 5.60513788879069 0.0 24 0.0 0.0 0.0 5.7889788776040785 0.0 25 0.0 0.0 0.0 5.949960479016853 0.0 26 0.0 0.0 0.0 6.094924411089057 0.0 27 0.0 0.0 0.0 6.258723190526554 0.0 28 0.0 0.0 0.0 6.426627000800079 0.0 29 0.0 0.0 0.0 6.608214247193688 0.0 30 0.0 0.0 0.0 6.849847630914263 0.0 31 0.0 0.0 0.0 7.048659908659039 0.0 32 0.0 0.0 0.0 7.232661879073841 0.0 33 0.0 0.0 0.0 7.424149493954336 0.0 34 0.0 0.0 0.0 7.615959072037657 0.0 35 0.0 0.0 0.0 7.839643007200707 0.0 36 0.0 0.0 0.0 8.044653076599875 0.0 37 0.0 0.0 0.0 8.255136520447078 0.0 38 0.0 0.0 0.0 8.497655302975422 8.049080070638727E-5 39 0.0 0.0 0.0 8.782109792671795 8.049080070638727E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAG 20 7.0335064E-4 45.000004 1 CGCAACC 20 7.0335064E-4 45.000004 35 TCGACTA 20 7.0335064E-4 45.000004 45 ACGCGTA 25 3.890988E-5 45.000004 32 TAATGCG 35 1.212029E-7 45.0 1 CGTTTTT 6155 0.0 43.281887 1 TATAGCG 55 6.184564E-11 40.909092 1 CGAATAT 50 1.0822987E-9 40.500004 14 TATCGTG 50 1.0822987E-9 40.500004 1 CACGACC 160 0.0 39.375004 27 GCGATCG 40 3.4585173E-7 39.375004 9 CGTAAGG 160 0.0 39.375004 2 GCGTAAG 75 0.0 39.0 1 TAAGGGA 1035 0.0 38.695652 4 CTATGCG 35 6.248698E-6 38.571426 1 CCGGATA 35 6.248698E-6 38.571426 20 ATCGTAG 35 6.248698E-6 38.571426 1 GCGTTAG 30 1.139975E-4 37.500004 1 GCACCGT 30 1.139975E-4 37.500004 39 TTCTCGT 30 1.139975E-4 37.500004 31 >>END_MODULE