##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547061_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 928165 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.654566806548406 31.0 31.0 33.0 30.0 34.0 2 32.05201984560935 33.0 31.0 34.0 30.0 34.0 3 32.1626316441581 33.0 31.0 34.0 30.0 34.0 4 35.829819051569494 37.0 35.0 37.0 35.0 37.0 5 35.77355534845636 37.0 35.0 37.0 35.0 37.0 6 35.82666120786713 37.0 35.0 37.0 35.0 37.0 7 36.11603648058266 37.0 35.0 37.0 35.0 37.0 8 36.06647417215689 37.0 35.0 37.0 35.0 37.0 9 37.86432692463086 39.0 38.0 39.0 35.0 39.0 10 37.38607898380137 39.0 37.0 39.0 35.0 39.0 11 37.1214353051451 39.0 37.0 39.0 33.0 39.0 12 36.42997527379291 38.0 35.0 39.0 33.0 39.0 13 36.1305565282035 39.0 35.0 39.0 32.0 39.0 14 37.17147489939828 39.0 35.0 41.0 32.0 41.0 15 37.379978775325505 39.0 35.0 41.0 33.0 41.0 16 37.48746397461658 39.0 35.0 41.0 33.0 41.0 17 37.457205346032225 39.0 35.0 41.0 33.0 41.0 18 37.35980456061153 39.0 35.0 41.0 33.0 41.0 19 37.32482155651204 39.0 35.0 41.0 33.0 41.0 20 37.1500304363987 39.0 35.0 41.0 32.0 41.0 21 37.08497627038296 39.0 35.0 41.0 32.0 41.0 22 37.01193106829066 39.0 35.0 41.0 32.0 41.0 23 36.978326051941195 38.0 35.0 41.0 32.0 41.0 24 36.894663125629606 38.0 35.0 41.0 32.0 41.0 25 36.79252072637947 38.0 35.0 41.0 32.0 41.0 26 36.64686235744722 38.0 35.0 41.0 31.0 41.0 27 36.55295340806861 38.0 35.0 41.0 31.0 41.0 28 36.59292474937107 38.0 35.0 41.0 31.0 41.0 29 36.61497794034466 38.0 35.0 41.0 31.0 41.0 30 36.561041409663154 38.0 35.0 41.0 31.0 41.0 31 36.40614761384021 38.0 35.0 41.0 31.0 41.0 32 36.32505642854449 38.0 35.0 41.0 31.0 41.0 33 36.204561688923846 38.0 35.0 41.0 30.0 41.0 34 36.059178055625885 38.0 35.0 41.0 30.0 41.0 35 35.96949464804211 38.0 35.0 41.0 30.0 41.0 36 35.874819671071414 38.0 35.0 41.0 30.0 41.0 37 35.8068651586733 38.0 35.0 41.0 30.0 41.0 38 35.73812845776344 38.0 35.0 41.0 29.0 41.0 39 35.69454676700802 38.0 35.0 40.0 29.0 41.0 40 35.55823264182554 38.0 35.0 40.0 29.0 41.0 41 35.51721191813955 37.0 35.0 40.0 29.0 41.0 42 35.43474705467239 37.0 35.0 40.0 28.0 41.0 43 35.31413811121945 37.0 34.0 40.0 28.0 41.0 44 35.18775756465715 37.0 34.0 40.0 28.0 41.0 45 35.09583964058115 37.0 34.0 40.0 27.0 41.0 46 35.04512451988601 36.0 34.0 40.0 27.0 41.0 47 35.01084936406781 36.0 34.0 40.0 27.0 41.0 48 34.93843443784241 36.0 34.0 40.0 27.0 41.0 49 34.875079323180685 36.0 34.0 40.0 27.0 41.0 50 34.76449445949804 36.0 34.0 40.0 27.0 41.0 51 34.39381683213653 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 4.0 14 13.0 15 29.0 16 59.0 17 152.0 18 360.0 19 654.0 20 1209.0 21 1814.0 22 2725.0 23 4186.0 24 5967.0 25 8831.0 26 11914.0 27 14395.0 28 15672.0 29 16929.0 30 19875.0 31 24098.0 32 30134.0 33 39846.0 34 75735.0 35 131521.0 36 60481.0 37 80060.0 38 124444.0 39 256874.0 40 180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.9145141219503 23.621769836182143 29.264839764481533 14.198876277386024 2 30.638948893785052 25.195627932533547 30.708117629947264 13.45730554373414 3 29.60551195100009 25.10501904295034 31.388384608340115 13.90108439770946 4 26.450684953645094 27.438763581906233 31.18443380217957 14.9261176622691 5 24.144844935975822 31.990217256630014 29.59592313866608 14.269014668728081 6 22.422952815501553 40.546885521432074 26.153431771290663 10.876729891775708 7 87.52398549826809 4.021375509742342 6.686095683418358 1.7685433085712132 8 88.89324635167239 2.8301002515716496 6.300711619162541 1.9759417775934236 9 85.06170777825064 4.01318731044588 8.02669783928504 2.898407072018445 10 48.62098872506505 23.302753282013438 15.783616059644567 12.29264193327695 11 42.14961779424994 22.294204155511142 20.656456556754456 14.899721493484455 12 36.82050066529119 20.975904068780874 24.85236999886874 17.3512252670592 13 24.188156200675525 31.11170966369126 26.121648629284667 18.578485506348546 14 18.405886884336297 34.059676889346186 28.05891193914875 19.47552428716877 15 18.524723513599415 22.999035731793377 40.975580850387594 17.500659904219614 16 21.429271735090204 20.508853490489297 38.830595853108015 19.231278921312484 17 22.36100262345596 20.327743450787306 27.72405768370925 29.58719624204748 18 24.692915591516595 23.706022097364155 30.68010536919621 20.92095694192304 19 28.731098457709564 24.958708850258304 25.711699967139463 20.598492724892665 20 30.572689123162366 24.456535206563487 24.779645860380427 20.191129809893717 21 26.02586824540895 26.307391465957025 27.370241282530582 20.296499006103442 22 24.36290961197632 23.404890294290347 27.85679270388347 24.375407389849865 23 22.872657340020364 26.490871773876414 26.941869171968346 23.69460171413488 24 23.41458684608879 23.83875711753837 32.62728070978759 20.11937532658525 25 21.647228671626273 24.513529383245437 31.073677632748485 22.7655643123798 26 20.41490467750885 29.919464750340723 27.058335533014066 22.60729503913636 27 21.00822590810901 27.96517860509715 29.415028577892937 21.611566908900894 28 18.938766275392847 26.86052587632587 33.755851599661696 20.44485624861959 29 20.133920154282915 25.39203697618419 32.67113067180943 21.802912197723465 30 22.77730791400236 26.08695652173913 30.434782608695656 20.700952955562858 31 27.685379215979918 24.79903896397731 25.8619965200153 21.653585300027473 32 28.758141063280775 25.92265383848777 25.226764637752986 20.09244046047847 33 26.857616910786337 26.21344265297657 25.740574143605933 21.18836629263116 34 21.907311738753346 26.530950854643304 28.559146272483883 23.00259113411947 35 22.042524766609386 27.09270442216632 28.657835621899125 22.206935189325176 36 27.461388869435932 26.57275376684102 25.363809236504288 20.602048127218758 37 22.981581938556182 29.56629478594862 26.227879741209808 21.224243534285392 38 22.80693626671982 29.94489126394553 24.005537808471555 23.2426346608631 39 22.8922659225461 28.71816972197831 25.267597894770866 23.121966460704723 40 24.958277892400595 25.347001880053654 25.22633367989528 24.46838654765047 41 20.31826237791772 25.18539268341297 26.208163419219645 28.28818151944967 42 23.23552385621091 26.496474226026624 24.9153975855586 25.352604332203864 43 22.933314658492833 26.27528510555774 25.943016597264496 24.848383638684933 44 21.79149181449419 28.139716537469095 26.847166182736903 23.221625465299812 45 20.89671556242694 30.365721611997863 24.373037121632468 24.364525703942725 46 23.490327689581054 28.904020298115096 26.366109474069805 21.239542538234044 47 22.725054273755205 26.14610548770962 27.345999903034485 23.782840335500694 48 23.509505314249083 24.25215344254524 28.858338765198 23.380002478007682 49 22.8731960373425 23.49980876245064 29.134475012524714 24.492520187682146 50 21.005855639891614 28.53328880102137 26.788986871946257 23.67186868714076 51 20.612822073661473 29.776817699439217 25.167615671782496 24.442744555116818 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 409.0 1 803.0 2 1197.0 3 4619.5 4 8042.0 5 5723.0 6 3404.0 7 3386.0 8 3368.0 9 3534.5 10 3701.0 11 3665.0 12 3629.0 13 3534.0 14 3439.0 15 3373.0 16 3307.0 17 3182.5 18 3058.0 19 2835.5 20 2613.0 21 2793.0 22 2973.0 23 3121.5 24 3270.0 25 3752.0 26 4987.0 27 5740.0 28 6900.0 29 8060.0 30 9337.0 31 10614.0 32 12587.5 33 14561.0 34 16950.5 35 19340.0 36 22618.0 37 25896.0 38 29317.5 39 32739.0 40 42787.0 41 52835.0 42 61444.5 43 70054.0 44 71486.5 45 72919.0 46 72245.5 47 71572.0 48 71220.0 49 70868.0 50 69944.5 51 69021.0 52 66261.0 53 63501.0 54 58585.5 55 53670.0 56 50190.5 57 46711.0 58 45883.5 59 45056.0 60 43329.0 61 41602.0 62 38481.5 63 35361.0 64 29902.0 65 24443.0 66 20722.0 67 17001.0 68 14049.0 69 11097.0 70 9250.0 71 7403.0 72 6285.0 73 5167.0 74 4146.0 75 2446.0 76 1767.0 77 1282.0 78 797.0 79 599.5 80 402.0 81 244.0 82 86.0 83 74.5 84 63.0 85 47.5 86 32.0 87 20.0 88 8.0 89 6.0 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 1.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 928165.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.584580328757703 #Duplication Level Percentage of deduplicated Percentage of total 1 77.27691699144255 18.22543656343418 2 5.69374950464622 2.6856938512830633 3 1.9877351825420386 1.4063970025488173 4 1.1357727043860548 1.0714689032721314 5 0.8626477199070615 1.0172592222783883 6 0.6840594476536789 0.9679952995700288 7 0.6218040649431128 1.0265491542879241 8 0.5266246234484252 0.993617658785693 9 0.5006082993665651 1.0625972984688188 >10 9.920362271689905 59.068657252783666 >50 0.759380734483566 10.81410517098851 >100 0.02941910835480698 1.0831451103165581 >500 0.0 0.0 >1k 9.193471360877181E-4 0.5770775119822878 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4301 0.4633874365010532 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1022 0.11010973264451902 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.039217165051472526 0.0 2 0.0 0.0 0.0 0.13036475195681801 0.0 3 0.0 0.0 0.0 0.19048337310715227 0.0 4 0.0 0.0 0.0 0.27128797142749406 0.0 5 0.0 0.0 0.0 0.4726530304417857 0.0 6 0.0 0.0 0.0 0.7339212316775573 0.0 7 0.0 0.0 0.0 0.9084591640494956 0.0 8 0.0 0.0 0.0 1.366675106258047 0.0 9 0.0 0.0 0.0 1.5918505869107324 0.0 10 0.0 0.0 0.0 1.9087123517908993 0.0 11 0.0 0.0 0.0 2.1944374114516276 0.0 12 0.0 0.0 0.0 2.4452548846379685 0.0 13 0.0 0.0 0.0 2.556872969784467 0.0 14 0.0 0.0 0.0 2.608695652173913 0.0 15 0.0 0.0 0.0 2.6750631622610204 0.0 16 0.0 0.0 0.0 2.8157709028028424 0.0 17 0.0 0.0 0.0 2.967791287109512 0.0 18 0.0 0.0 0.0 3.171418874876773 0.0 19 0.0 0.0 0.0 3.274202323940248 0.0 20 0.0 0.0 0.0 3.3950860030274788 0.0 21 0.0 0.0 0.0 3.5424735903637825 0.0 22 0.0 0.0 0.0 3.6938475378838893 0.0 23 0.0 0.0 0.0 3.8664461598961393 0.0 24 0.0 0.0 0.0 4.004244934898429 0.0 25 0.0 0.0 0.0 4.132454897566705 0.0 26 0.0 0.0 0.0 4.247305166646017 0.0 27 0.0 0.0 0.0 4.36549535912257 0.0 28 0.0 0.0 0.0 4.487025474996364 0.0 29 0.0 0.0 0.0 4.616743790166619 0.0 30 0.0 0.0 0.0 4.792790075040537 0.0 31 0.0 0.0 0.0 4.935437125942047 0.0 32 0.0 0.0 0.0 5.082286015956215 0.0 33 0.0 0.0 0.0 5.222347319711473 0.0 34 0.0 0.0 0.0 5.373829006696008 0.0 35 0.0 0.0 0.0 5.551922341394041 0.0 36 0.0 0.0 0.0 5.709760656779775 0.0 37 0.0 0.0 0.0 5.874817516282127 0.0 38 0.0 0.0 0.0 6.065408628853706 0.0 39 0.0 0.0 0.0 6.317411236148745 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATTACG 55 1.8189894E-12 45.000004 1 CGTACGT 20 7.0325856E-4 45.0 31 TACGTTA 20 7.0325856E-4 45.0 33 CGTAAAC 30 2.1650485E-6 44.999996 10 AATGCGG 115 0.0 43.043476 2 ACGGGTA 95 0.0 42.63158 5 CGTTTTT 2960 0.0 42.41554 1 CGGTCTA 75 0.0 42.000004 31 GACCGAT 145 0.0 41.896553 9 CTATGCG 55 6.002665E-11 40.909092 1 TTACGGG 330 0.0 39.545452 3 GTTTACG 40 3.4572622E-7 39.375 1 CGTAAGG 160 0.0 39.375 2 TCACGAG 35 6.246988E-6 38.57143 1 TGTTACG 35 6.246988E-6 38.57143 1 TTACCGG 35 6.246988E-6 38.57143 2 AGGGCGA 480 0.0 38.437496 6 GGGCGAT 1075 0.0 38.302326 7 TAGACGG 100 0.0 38.25 2 TCGTAAG 65 9.094947E-12 38.07692 1 >>END_MODULE