SRR1547059_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547059_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1108035
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13442	1.2131385741425136	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGATAG	20	7.033176E-4	45.000004	1
CGTTTAG	20	7.033176E-4	45.000004	31
TAGCGCG	25	3.8907143E-5	45.0	1
AGTCGAC	25	3.8907143E-5	45.0	35
TATAACG	30	2.1654305E-6	44.999996	1
CGTTTTT	7980	0.0	43.843983	1
TACGGGT	70	0.0	41.785713	4
GCGTAAG	60	3.6379788E-12	41.249996	1
AACGTTG	45	1.9281288E-8	40.0	1
ACGGGAT	365	0.0	39.452057	5
TACGGGA	325	0.0	38.76923	4
TCGACAA	140	0.0	38.571426	19
CTACGGG	170	0.0	38.38235	3
TAAGGGA	1105	0.0	38.076923	4
AACACGT	65	9.094947E-12	38.07692	41
TTACGGG	320	0.0	37.968754	3
AGGGCGA	840	0.0	37.76786	6
TAAGGGT	305	0.0	37.622948	4
GGGCGAT	1330	0.0	37.556393	7
AACGTAG	30	1.1398955E-4	37.499996	1