##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547059_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1108035 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.6353093539464 31.0 31.0 33.0 30.0 34.0 2 32.02120871633116 33.0 31.0 34.0 30.0 34.0 3 32.02196681512768 33.0 31.0 34.0 30.0 34.0 4 35.7544978272347 37.0 35.0 37.0 35.0 37.0 5 35.71736181618812 37.0 35.0 37.0 33.0 37.0 6 35.77935624777196 37.0 35.0 37.0 33.0 37.0 7 36.112595721254294 37.0 35.0 37.0 35.0 37.0 8 36.05638901298244 37.0 35.0 37.0 35.0 37.0 9 37.823832279666256 39.0 38.0 39.0 35.0 39.0 10 37.38799225656229 39.0 37.0 39.0 34.0 39.0 11 37.10568619222317 39.0 37.0 39.0 33.0 39.0 12 36.56890260686711 39.0 35.0 39.0 33.0 39.0 13 36.35862405068432 39.0 35.0 39.0 32.0 39.0 14 37.45889525150379 40.0 35.0 41.0 32.0 41.0 15 37.62788540073193 40.0 35.0 41.0 33.0 41.0 16 37.72424788025649 40.0 35.0 41.0 33.0 41.0 17 37.68663895996065 40.0 35.0 41.0 33.0 41.0 18 37.52964662668598 39.0 36.0 41.0 33.0 41.0 19 37.40959446226879 39.0 35.0 41.0 33.0 41.0 20 37.18585604245353 39.0 35.0 41.0 32.0 41.0 21 37.127308252898146 39.0 35.0 41.0 32.0 41.0 22 37.043337078702386 39.0 35.0 41.0 32.0 41.0 23 36.98738216753081 38.0 35.0 41.0 32.0 41.0 24 36.900508557942665 38.0 35.0 41.0 32.0 41.0 25 36.79179448302626 38.0 35.0 41.0 32.0 41.0 26 36.67620517402429 38.0 35.0 41.0 32.0 41.0 27 36.56989806278683 38.0 35.0 41.0 31.0 41.0 28 36.58098345268877 38.0 35.0 41.0 31.0 41.0 29 36.5713691354515 38.0 35.0 41.0 31.0 41.0 30 36.47877819743961 38.0 35.0 41.0 31.0 41.0 31 36.306095926572716 38.0 35.0 41.0 31.0 41.0 32 36.068086296913 38.0 35.0 41.0 30.0 41.0 33 35.82861191207859 38.0 35.0 41.0 29.0 41.0 34 35.578523241594354 38.0 35.0 41.0 27.0 41.0 35 35.41986579846304 38.0 35.0 41.0 27.0 41.0 36 35.27726921983511 38.0 35.0 41.0 25.0 41.0 37 35.20462079266449 38.0 35.0 41.0 25.0 41.0 38 35.12668101639389 38.0 34.0 41.0 25.0 41.0 39 35.048494858014415 38.0 34.0 40.0 24.0 41.0 40 34.95044651116616 38.0 34.0 40.0 24.0 41.0 41 34.90955971607395 38.0 34.0 40.0 24.0 41.0 42 34.80952587237768 37.0 34.0 40.0 23.0 41.0 43 34.68384753189204 37.0 34.0 40.0 23.0 41.0 44 34.54136647308072 37.0 34.0 40.0 23.0 41.0 45 34.46277509284454 37.0 34.0 40.0 23.0 41.0 46 34.422769136354 37.0 34.0 40.0 23.0 41.0 47 34.366778125239726 36.0 34.0 40.0 23.0 41.0 48 34.28362280974879 36.0 34.0 40.0 23.0 41.0 49 34.21160883907097 36.0 34.0 40.0 23.0 41.0 50 34.11579327367818 36.0 34.0 40.0 23.0 41.0 51 33.7396733857685 35.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 4.0 13 4.0 14 9.0 15 35.0 16 97.0 17 209.0 18 456.0 19 898.0 20 1571.0 21 2495.0 22 3919.0 23 5921.0 24 9082.0 25 14164.0 26 20235.0 27 23197.0 28 23104.0 29 23170.0 30 25298.0 31 29083.0 32 35687.0 33 45822.0 34 81933.0 35 137171.0 36 73839.0 37 96752.0 38 147496.0 39 306127.0 40 253.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.15124070990537 23.36451465883298 27.02477809816477 17.45946653309688 2 34.60197556936379 24.065304796328636 28.237916672307286 13.0948029620003 3 28.21030021614841 23.85484213043812 34.73184511319588 13.203012540217593 4 25.389901943530663 26.106215056383597 34.30198504559874 14.201897954486997 5 23.191325183771273 30.483784356992334 32.3362529161985 13.988637543037902 6 20.88192159994946 39.19984477024643 29.12146276967785 10.796770860126259 7 83.89942555966192 3.4732657361906436 10.7326032119924 1.8947054921550313 8 84.47287314931387 2.7768075918179482 10.430446691665878 2.3198725672022995 9 79.95749231748096 4.567996498305559 12.377226351153167 3.0972848330603275 10 44.590649212344374 26.786969725685562 17.52832717378061 11.094053888189451 11 36.091820204235425 21.90463297639515 27.256629980099905 14.746916839269517 12 31.938973046880285 20.883907096797483 30.260867210873304 16.916252645448925 13 22.592697884092107 29.583632285983747 30.789460621731262 17.034209208192884 14 17.24413037494303 31.934731303614054 32.85212109725776 17.96901722418516 15 17.071211649451506 23.444295532180842 42.976620774614524 16.50787204375313 16 19.853975731813524 21.798138145455695 39.869227957600614 18.478658165130163 17 20.64312047904624 21.25077276439824 31.310653544337498 26.795453212218025 18 22.625187832514314 23.002161484068644 34.40496013212579 19.967690551291252 19 25.80857102889349 24.773495422076017 29.63868469858804 19.77924885044245 20 26.96178369816838 24.75643819915436 28.479154539342165 19.802623563335093 21 23.64284521698322 26.05702888446665 30.674572554116068 19.625553344434067 22 22.812456285225647 22.99701724223513 30.647768346667746 23.542758125871472 23 20.60088354609737 26.42651179791252 30.50093182977072 22.47167282621939 24 20.90818430825741 23.597991038189225 35.69661608162197 19.797208571931392 25 20.042507682519055 25.24748766961332 33.47367186054592 21.2363327873217 26 19.627809590852273 28.913436849918998 30.01710234785002 21.4416512113787 27 20.020035468193694 27.31177264256093 31.745657853768154 20.92253403547722 28 18.792817916401557 25.753247866719008 36.01267107988466 19.44126313699477 29 19.498662045874003 24.22170779803887 34.66181122437468 21.617818931712446 30 21.20339158961585 25.51561999395326 32.26820452422532 21.012783892205572 31 26.436619781866096 24.475039145875353 28.152269558272074 20.93607151398647 32 26.650782691882473 25.146768829504484 28.153803805836457 20.048644672776582 33 25.595310617444394 26.03545916870857 27.848939789808085 20.52029042403895 34 21.40988326181032 26.836155897602517 29.74382578167657 22.010135058910592 35 21.563849517388892 26.89815754917489 30.004286868194598 21.53370606524162 36 25.851890960123104 26.76675375777841 27.19183058296895 20.189524699129542 37 22.403804933959666 29.624064221798047 27.508968579512377 20.463162264729906 38 21.891636997026268 30.554449994810636 25.90008438361604 21.65382862454706 39 21.267198238322795 29.562062570225674 27.2301867720785 21.940552419373034 40 22.244965186117767 26.755472525687367 27.5472345187652 23.452327769429665 41 19.822478531815328 25.995839481604822 28.207051221306184 25.97463076527366 42 22.26409815574418 26.948155969802396 26.613148501626753 24.17459737282667 43 22.228539712193207 26.74599629073089 27.661942086666937 23.363521910408966 44 21.27577197471199 28.208134219586928 28.552347173148863 21.96374663255222 45 20.504677198824947 29.589949775954732 27.000230137134658 22.905142888085663 46 22.93763283650787 28.592959608676622 27.67159882133687 20.797808733478636 47 22.3905382050206 26.30106449706011 28.791148294052082 22.517249003867207 48 22.76480436087308 24.472151150460046 29.6605251639163 23.102519324750574 49 21.655092122541255 24.220985799185044 30.478098616018446 23.64582346225525 50 19.7421561593271 27.916175933070708 29.197633648756582 23.144034258845615 51 19.699016727810946 29.28761275591475 27.306989400154325 23.706381116119978 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 606.0 1 1044.5 2 1483.0 3 11660.5 4 21838.0 5 15063.0 6 8288.0 7 8168.0 8 8048.0 9 8231.5 10 8415.0 11 8397.5 12 8380.0 13 8038.0 14 7696.0 15 7210.5 16 6725.0 17 6479.5 18 6234.0 19 5873.5 20 5513.0 21 5392.5 22 5272.0 23 5404.5 24 5537.0 25 6254.0 26 7756.0 27 8541.0 28 10569.0 29 12597.0 30 13910.0 31 15223.0 32 17550.5 33 19878.0 34 23158.0 35 26438.0 36 28902.0 37 31366.0 38 35764.0 39 40162.0 40 49518.0 41 58874.0 42 68317.0 43 77760.0 44 82400.5 45 87041.0 46 87646.0 47 88251.0 48 89127.0 49 90003.0 50 85775.0 51 81547.0 52 75454.0 53 69361.0 54 64435.5 55 59510.0 56 55454.5 57 51399.0 58 48057.5 59 44716.0 60 42078.5 61 39441.0 62 36250.5 63 33060.0 64 28447.5 65 23835.0 66 20443.0 67 17051.0 68 14536.5 69 12022.0 70 9873.5 71 7725.0 72 6463.0 73 5201.0 74 4047.5 75 2312.0 76 1730.0 77 1225.5 78 721.0 79 590.0 80 459.0 81 288.0 82 117.0 83 88.5 84 60.0 85 44.0 86 28.0 87 18.5 88 9.0 89 7.5 90 6.0 91 3.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1108035.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.49425764409597 #Duplication Level Percentage of deduplicated Percentage of total 1 77.75359149210848 22.15530868729928 2 6.384746866570487 3.638572444167878 3 2.4423696523300658 2.08780530406842 4 1.4784572272287089 1.6851016459372228 5 1.036342346347989 1.476490291216327 6 0.8134016114637589 1.3906365051102714 7 0.7089349637896609 1.4140402857791314 8 0.57765915479445 1.3167975029747017 9 0.5035962378148694 1.2914640854004884 >10 7.843434387449409 53.4522315578313 >50 0.4293732904012494 7.3670909077746565 >100 0.02649658960427451 1.259941447619101 >500 0.0012769440773085507 0.2417821361462698 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 3.192360193271377E-4 1.2227371986750033 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13442 1.2131385741425136 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04674942578528657 0.0 2 0.0 0.0 0.0 0.14918301317196658 0.0 3 0.0 0.0 0.0 0.24954085385389452 0.0 4 0.0 0.0 0.0 0.390240380493396 0.0 5 0.0 0.0 0.0 0.7423953214474271 0.0 6 0.0 0.0 0.0 1.3013126841661138 0.0 7 0.0 0.0 0.0 1.684152576407785 0.0 8 0.0 0.0 0.0 2.5573199402545947 0.0 9 0.0 0.0 0.0 3.0585676445238645 0.0 10 0.0 0.0 0.0 3.67560591497561 0.0 11 0.0 0.0 0.0 4.081640020396468 0.0 12 0.0 0.0 0.0 4.436863456479263 0.0 13 0.0 0.0 0.0 4.632615395723059 0.0 14 0.0 0.0 0.0 4.725843497723448 0.0 15 0.0 0.0 0.0 4.820605847288218 0.0 16 0.0 0.0 0.0 4.980528593410858 0.0 17 0.0 0.0 0.0 5.171316790534595 0.0 18 0.0 0.0 0.0 5.43944911487453 0.0 19 0.0 0.0 0.0 5.575906898247799 0.0 20 0.0 0.0 0.0 5.731226901677293 0.0 21 0.0 0.0 0.0 5.919668602526094 0.0 22 0.0 0.0 0.0 6.113435044921866 0.0 23 0.0 0.0 0.0 6.328319953792073 0.0 24 0.0 0.0 0.0 6.505390172693101 0.0 25 0.0 0.0 0.0 6.656829432283276 0.0 26 0.0 0.0 0.0 6.799875455197715 0.0 27 0.0 0.0 0.0 6.949780467223508 0.0 28 0.0 0.0 0.0 7.109432463775963 0.0 29 0.0 0.0 0.0 7.291827424223964 0.0 30 0.0 0.0 0.0 7.5420902769316855 0.0 31 1.8049971345670488E-4 0.0 0.0 7.738203215602395 0.0 32 1.8049971345670488E-4 0.0 0.0 7.921861674044592 0.0 33 1.8049971345670488E-4 0.0 0.0 8.101458888934014 0.0 34 1.8049971345670488E-4 0.0 0.0 8.291795836774108 0.0 35 1.8049971345670488E-4 0.0 0.0 8.506861245357774 0.0 36 1.8049971345670488E-4 0.0 0.0 8.704598681449593 0.0 37 1.8049971345670488E-4 0.0 0.0 8.897191875707897 0.0 38 1.8049971345670488E-4 0.0 0.0 9.123719016096063 0.0 39 1.8049971345670488E-4 0.0 0.0 9.360805389721444 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 20 7.033176E-4 45.000004 1 CGTTTAG 20 7.033176E-4 45.000004 31 TAGCGCG 25 3.8907143E-5 45.0 1 AGTCGAC 25 3.8907143E-5 45.0 35 TATAACG 30 2.1654305E-6 44.999996 1 CGTTTTT 7980 0.0 43.843983 1 TACGGGT 70 0.0 41.785713 4 GCGTAAG 60 3.6379788E-12 41.249996 1 AACGTTG 45 1.9281288E-8 40.0 1 ACGGGAT 365 0.0 39.452057 5 TACGGGA 325 0.0 38.76923 4 TCGACAA 140 0.0 38.571426 19 CTACGGG 170 0.0 38.38235 3 TAAGGGA 1105 0.0 38.076923 4 AACACGT 65 9.094947E-12 38.07692 41 TTACGGG 320 0.0 37.968754 3 AGGGCGA 840 0.0 37.76786 6 TAAGGGT 305 0.0 37.622948 4 GGGCGAT 1330 0.0 37.556393 7 AACGTAG 30 1.1398955E-4 37.499996 1 >>END_MODULE