SRR1547058_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547058_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	761856
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5205	0.6831999747983871	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTAGCG	50	2.1827873E-11	45.0	1
TTAGACG	25	3.889563E-5	45.0	1
TACGGGT	40	6.8102963E-9	45.0	4
TAACGCC	25	3.889563E-5	45.0	12
CGTTACC	20	7.031788E-4	45.0	35
GTGTCGA	25	3.889563E-5	45.0	43
TATTACG	20	7.031788E-4	45.0	1
CGGTCTA	40	6.8102963E-9	45.0	31
TGTACGT	20	7.031788E-4	45.0	38
TAATGCG	50	2.1827873E-11	45.0	1
AACACGT	20	7.031788E-4	45.0	41
AATGCGG	160	0.0	42.1875	2
CGTTTTT	2890	0.0	42.119377	1
GCGATCA	100	0.0	40.5	9
AGTAGCG	50	1.0804797E-9	40.5	1
CGTTAGG	190	0.0	40.263157	2
CTCACGA	45	1.9268555E-8	40.000004	24
TCAACGG	45	1.9268555E-8	40.000004	2
TAAGGGA	605	0.0	38.67769	4
ACGTAAG	35	6.2455165E-6	38.571426	1