##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547058_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 761856 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.635613554267472 31.0 31.0 33.0 30.0 34.0 2 32.02104990969422 33.0 31.0 34.0 30.0 34.0 3 32.10753213205645 33.0 31.0 34.0 30.0 34.0 4 35.790054813508064 37.0 35.0 37.0 35.0 37.0 5 35.729408182123656 37.0 35.0 37.0 33.0 37.0 6 35.780203870547716 37.0 35.0 37.0 35.0 37.0 7 36.089507728494624 37.0 35.0 37.0 35.0 37.0 8 36.02375252016129 37.0 35.0 37.0 35.0 37.0 9 37.793470157090056 39.0 38.0 39.0 35.0 39.0 10 37.37944178427419 39.0 37.0 39.0 34.0 39.0 11 37.08662660660282 39.0 37.0 39.0 33.0 39.0 12 36.37444740213374 38.0 35.0 39.0 33.0 39.0 13 36.07127068632393 38.0 35.0 39.0 32.0 39.0 14 37.051849693380376 39.0 35.0 41.0 32.0 41.0 15 37.296708301831316 39.0 35.0 41.0 32.0 41.0 16 37.439139417422716 39.0 35.0 41.0 33.0 41.0 17 37.4158686155914 39.0 35.0 41.0 33.0 41.0 18 37.31086189516129 39.0 35.0 41.0 33.0 41.0 19 37.24939621135753 39.0 35.0 41.0 32.0 41.0 20 37.05044391591062 39.0 35.0 41.0 32.0 41.0 21 36.9686528687836 38.0 35.0 41.0 32.0 41.0 22 36.897559381300404 38.0 35.0 41.0 32.0 41.0 23 36.84761949764785 38.0 35.0 41.0 32.0 41.0 24 36.75836509786626 38.0 35.0 41.0 32.0 41.0 25 36.63680406796035 38.0 35.0 41.0 31.0 41.0 26 36.505982757896504 38.0 35.0 41.0 31.0 41.0 27 36.399139732442876 38.0 35.0 40.0 31.0 41.0 28 36.41419113323253 38.0 35.0 40.0 31.0 41.0 29 36.43772576444893 38.0 35.0 41.0 31.0 41.0 30 36.40889879452285 38.0 35.0 40.0 31.0 41.0 31 36.252192015288976 38.0 35.0 40.0 31.0 41.0 32 36.130907940608196 38.0 35.0 41.0 30.0 41.0 33 36.01740617649529 38.0 35.0 41.0 30.0 41.0 34 35.851834204889116 38.0 35.0 41.0 30.0 41.0 35 35.749614100302416 38.0 35.0 41.0 29.0 41.0 36 35.63077405703965 38.0 35.0 41.0 29.0 41.0 37 35.555106214297716 38.0 35.0 40.0 29.0 41.0 38 35.477146599882396 37.0 35.0 40.0 29.0 41.0 39 35.391381048387096 37.0 35.0 40.0 28.0 41.0 40 35.26931861139113 37.0 34.0 40.0 27.0 41.0 41 35.227012716313844 37.0 34.0 40.0 27.0 41.0 42 35.128071446572584 37.0 34.0 40.0 27.0 41.0 43 35.00968293220766 36.0 34.0 40.0 27.0 41.0 44 34.88238065986223 36.0 34.0 40.0 27.0 41.0 45 34.79492581275202 36.0 34.0 40.0 26.0 41.0 46 34.76581269951277 36.0 34.0 40.0 26.0 41.0 47 34.717695995043684 36.0 34.0 40.0 26.0 41.0 48 34.63194750714046 35.0 34.0 40.0 26.0 41.0 49 34.56497290826613 36.0 34.0 40.0 26.0 41.0 50 34.44473890078965 35.0 34.0 40.0 26.0 41.0 51 34.06743925361223 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 7.0 13 2.0 14 8.0 15 26.0 16 58.0 17 143.0 18 318.0 19 606.0 20 1123.0 21 1704.0 22 2517.0 23 3827.0 24 5451.0 25 7786.0 26 10495.0 27 12633.0 28 13512.0 29 14745.0 30 17464.0 31 20680.0 32 25745.0 33 33996.0 34 63376.0 35 107933.0 36 52482.0 37 67982.0 38 101192.0 39 195878.0 40 166.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.00385899697581 22.294764364919356 27.993347824260752 14.708028813844088 2 32.27355300739247 24.505812121975808 29.50439453125 13.716240339381722 3 29.87729964717742 24.505680863575268 31.353431619623656 14.263587869623656 4 26.79994644657258 26.876995127688176 31.0934087281586 15.229649697580644 5 24.241195186491936 31.212985131048388 29.397550193212364 15.148269489247312 6 22.449649277553764 40.369046118951616 26.43373550907258 10.747569094422044 7 85.96165154569893 4.207356770833334 7.612593455981183 2.218398227486559 8 86.63238197244624 3.614462575604839 7.301248529905914 2.451906922043011 9 82.66142158098118 4.696950604838709 8.904307375672044 3.737320438508065 10 50.13283350134409 24.072396883400536 13.798801873319894 11.995967741935484 11 42.107826150873656 20.778336063508064 21.731009534610216 15.382828251008066 12 35.84706296202957 20.946084299395164 26.342642179099464 16.864210559475808 13 24.754546790994624 30.737829721102152 27.133999075940864 17.373624411962364 14 18.179025957661292 34.09371324764785 30.17131846438172 17.55594233030914 15 17.40893292170699 22.190938970094088 43.05656186995967 17.343566238239248 16 20.660466019825268 20.128869497647848 39.477670320900536 19.732994161626344 17 22.125309769825268 19.827237693212364 28.168052755376344 29.87939978158602 18 24.336751302083336 22.413421959005376 31.709535660282256 21.540291078629032 19 29.236233618951612 23.470314600134408 26.063980594758064 21.229471186155912 20 30.04701675907258 24.154039608534948 24.8911867859543 20.907756846438172 21 25.840316280241936 25.438665574596776 28.24864541330645 20.472372731854836 22 24.70873760920699 22.491126932123656 27.941369497647848 24.858765961021508 23 22.712034820228492 26.167805989583332 27.28665259576613 23.833506594422044 24 22.794727612567204 23.392478368615592 33.274135794690864 20.538658224126344 25 21.323058425739248 24.517756636424732 31.32980510752688 22.82937983030914 26 20.741714969758064 29.09499957997312 27.18505859375 22.97822685651882 27 21.120264196908604 27.337449596774192 29.809439054099464 21.73284715221774 28 19.637044270833336 25.282074302755376 34.237572454637096 20.843308971774192 29 19.683115969422044 24.354602444556452 33.878843245967744 22.083438340053764 30 22.895009030577956 24.945921538978492 30.29023857526882 21.868830855174732 31 28.033381636424732 23.525049353158604 26.07146232358871 22.370106686827956 32 29.03383316532258 24.993830855174732 25.77455582157258 20.197780157930108 33 26.996046496975808 24.64258337533602 26.62629158266129 21.73507854502688 34 22.229528939852152 25.428427419354836 29.072029359879032 23.27001428091398 35 22.441642515120968 25.630040322580644 29.76835517473118 22.159961987567204 36 28.001223328293012 24.36287172379032 26.59912109375 21.036783854166664 37 23.812767767137096 27.741331695228492 27.365013860887093 21.080886676747312 38 23.456663726478492 29.607169858870968 24.490848664314516 22.44531775033602 39 23.398122479838708 27.49299080141129 26.376113071236556 22.73277364751344 40 24.723963583669356 24.853253108198924 26.080650411626344 24.342132896505376 41 21.277774277553764 23.719049269153224 27.037655409946236 27.965521043346776 42 23.67494644657258 25.882056451612907 25.277611517137093 25.16538558467742 43 23.686759702620968 24.98228011592742 26.052692372311824 25.278267809139788 44 22.26116221438172 26.898521505376344 27.609942036290324 23.230374243951612 45 20.745652721774192 29.506363407258064 26.005964381720432 23.742019489247312 46 24.095104586693548 27.435237105174732 27.052618867607524 21.417039440524192 47 23.456794984879032 25.498256888440864 28.071971606182792 22.972976520497312 48 23.949539020497312 23.599210349462364 29.0537844422043 23.39746618783602 49 22.596527427755376 22.45214318716398 30.620222194220432 24.331107190860216 50 20.869035618279568 28.124606224798388 27.777033980174732 23.229324176747312 51 20.94162151377688 29.976399739583332 25.244796917002688 23.837181829637096 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 375.0 1 717.0 2 1059.0 3 4781.0 4 8503.0 5 5858.5 6 3214.0 7 3207.0 8 3200.0 9 3312.5 10 3425.0 11 3414.5 12 3404.0 13 3216.5 14 3029.0 15 2896.5 16 2764.0 17 2702.0 18 2640.0 19 2548.0 20 2456.0 21 2523.5 22 2591.0 23 2921.5 24 3252.0 25 3534.5 26 4375.5 27 4934.0 28 6003.5 29 7073.0 30 8224.5 31 9376.0 32 10707.0 33 12038.0 34 13661.5 35 15285.0 36 16831.0 37 18377.0 38 21226.5 39 24076.0 40 31646.5 41 39217.0 42 46502.5 43 53788.0 44 56354.0 45 58920.0 46 58641.0 47 58362.0 48 57945.5 49 57529.0 50 56767.0 51 56005.0 52 52309.0 53 48613.0 54 45892.0 55 43171.0 56 41266.0 57 39361.0 58 38775.5 59 38190.0 60 35862.0 61 33534.0 62 31173.5 63 28813.0 64 25805.0 65 22797.0 66 19777.0 67 16757.0 68 14489.5 69 12222.0 70 10180.5 71 8139.0 72 6599.0 73 5059.0 74 4139.0 75 2479.5 76 1740.0 77 1321.5 78 903.0 79 638.5 80 374.0 81 265.5 82 157.0 83 114.0 84 71.0 85 43.0 86 15.0 87 10.5 88 6.0 89 3.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 761856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.264937405162165 #Duplication Level Percentage of deduplicated Percentage of total 1 76.9209553071758 19.434031209810733 2 5.644947632974787 2.8523849720505265 3 2.09672889817867 1.5892117310423615 4 1.2579595898747242 1.271290811856335 5 0.93980712334252 1.1872084072087146 6 0.790817522456201 1.1987973122256805 7 0.6401218398910499 1.1320846751567228 8 0.5754159111510624 1.1630277581732755 9 0.5299001465558236 1.2049104630347227 >10 10.216343532469327 61.69344775349261 >50 0.3624226076750505 5.519319590388477 >100 0.023533935563307105 0.9759095684812197 >500 5.22976345851269E-4 0.09064093744626547 >1k 0.0 0.0 >5k 5.22976345851269E-4 0.6877348096323787 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5205 0.6831999747983871 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.312584005376344E-4 0.0 0.0 0.03714612735215054 0.0 2 1.312584005376344E-4 0.0 0.0 0.13545866935483872 0.0 3 1.312584005376344E-4 0.0 0.0 0.20686323924731181 0.0 4 1.312584005376344E-4 0.0 0.0 0.3165952620967742 0.0 5 1.312584005376344E-4 0.0 0.0 0.6012947328629032 0.0 6 1.312584005376344E-4 0.0 0.0 0.9450604838709677 0.0 7 1.312584005376344E-4 0.0 0.0 1.1767315608198925 0.0 8 1.312584005376344E-4 0.0 0.0 1.7343172463037635 0.0 9 1.312584005376344E-4 0.0 0.0 2.031748781922043 0.0 10 1.312584005376344E-4 0.0 0.0 2.4667391213037635 0.0 11 1.312584005376344E-4 0.0 0.0 2.782546832997312 0.0 12 1.312584005376344E-4 0.0 0.0 3.0992733534946235 0.0 13 1.312584005376344E-4 0.0 0.0 3.231975596438172 0.0 14 1.312584005376344E-4 0.0 0.0 3.286841607862903 0.0 15 1.312584005376344E-4 0.0 0.0 3.35693359375 0.0 16 1.312584005376344E-4 0.0 0.0 3.502367901545699 0.0 17 1.312584005376344E-4 0.0 0.0 3.658565398185484 0.0 18 1.312584005376344E-4 0.0 0.0 3.8885301159274195 0.0 19 1.312584005376344E-4 0.0 0.0 4.003643733198925 0.0 20 1.312584005376344E-4 0.0 0.0 4.131489415322581 0.0 21 1.312584005376344E-4 0.0 0.0 4.281780283938172 0.0 22 1.312584005376344E-4 0.0 0.0 4.438109038978495 0.0 23 1.312584005376344E-4 0.0 0.0 4.609663768481183 0.0 24 1.312584005376344E-4 0.0 0.0 4.744203629032258 0.0 25 1.312584005376344E-4 0.0 0.0 4.855773269489247 0.0 26 1.312584005376344E-4 0.0 0.0 4.968918010752688 0.0 27 2.625168010752688E-4 0.0 0.0 5.088363155241935 0.0 28 2.625168010752688E-4 0.0 0.0 5.213058635752688 0.0 29 2.625168010752688E-4 0.0 0.0 5.345498361895161 0.0 30 2.625168010752688E-4 0.0 0.0 5.523747269825269 0.0 31 2.625168010752688E-4 0.0 0.0 5.667606476814516 0.0 32 2.625168010752688E-4 0.0 0.0 5.807396673387097 0.0 33 2.625168010752688E-4 0.0 0.0 5.950205813172043 0.0 34 2.625168010752688E-4 0.0 0.0 6.103121849798387 0.0 35 2.625168010752688E-4 0.0 0.0 6.281108240927419 0.0 36 2.625168010752688E-4 0.0 0.0 6.43034904233871 0.0 37 2.625168010752688E-4 0.0 0.0 6.591665616599462 0.0 38 2.625168010752688E-4 0.0 0.0 6.787240633400538 0.0 39 2.625168010752688E-4 0.0 0.0 7.082178259408602 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 50 2.1827873E-11 45.0 1 TTAGACG 25 3.889563E-5 45.0 1 TACGGGT 40 6.8102963E-9 45.0 4 TAACGCC 25 3.889563E-5 45.0 12 CGTTACC 20 7.031788E-4 45.0 35 GTGTCGA 25 3.889563E-5 45.0 43 TATTACG 20 7.031788E-4 45.0 1 CGGTCTA 40 6.8102963E-9 45.0 31 TGTACGT 20 7.031788E-4 45.0 38 TAATGCG 50 2.1827873E-11 45.0 1 AACACGT 20 7.031788E-4 45.0 41 AATGCGG 160 0.0 42.1875 2 CGTTTTT 2890 0.0 42.119377 1 GCGATCA 100 0.0 40.5 9 AGTAGCG 50 1.0804797E-9 40.5 1 CGTTAGG 190 0.0 40.263157 2 CTCACGA 45 1.9268555E-8 40.000004 24 TCAACGG 45 1.9268555E-8 40.000004 2 TAAGGGA 605 0.0 38.67769 4 ACGTAAG 35 6.2455165E-6 38.571426 1 >>END_MODULE