##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547057_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1014147 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.638232918896374 31.0 31.0 33.0 30.0 34.0 2 32.04082938666682 33.0 31.0 34.0 30.0 34.0 3 32.144765995462194 33.0 31.0 34.0 30.0 34.0 4 35.8170146931362 37.0 35.0 37.0 35.0 37.0 5 35.763483991965664 37.0 35.0 37.0 35.0 37.0 6 35.824013678490395 37.0 35.0 37.0 35.0 37.0 7 36.127699436077805 37.0 35.0 37.0 35.0 37.0 8 36.07482643048789 37.0 35.0 37.0 35.0 37.0 9 37.87976595108993 39.0 38.0 39.0 35.0 39.0 10 37.33583987331225 39.0 37.0 39.0 34.0 39.0 11 37.10026357125742 39.0 37.0 39.0 33.0 39.0 12 36.4896016060788 39.0 35.0 39.0 33.0 39.0 13 36.214901784455314 39.0 35.0 39.0 32.0 39.0 14 37.25813910606648 40.0 35.0 41.0 32.0 41.0 15 37.47087059371077 40.0 35.0 41.0 33.0 41.0 16 37.594069696010536 40.0 35.0 41.0 33.0 41.0 17 37.57693411310195 39.0 35.0 41.0 33.0 41.0 18 37.48797166485726 39.0 35.0 41.0 33.0 41.0 19 37.43997960847885 39.0 35.0 41.0 33.0 41.0 20 37.274775747500115 39.0 35.0 41.0 33.0 41.0 21 37.195257689467105 39.0 35.0 41.0 32.0 41.0 22 37.11756678272479 39.0 35.0 41.0 32.0 41.0 23 37.07646721826323 39.0 35.0 41.0 32.0 41.0 24 37.00707688333151 39.0 35.0 41.0 32.0 41.0 25 36.88741572967233 38.0 35.0 41.0 32.0 41.0 26 36.773459863313704 38.0 35.0 41.0 32.0 41.0 27 36.69126960884369 38.0 35.0 41.0 31.0 41.0 28 36.718403742258275 38.0 35.0 41.0 31.0 41.0 29 36.741839200825915 38.0 35.0 41.0 31.0 41.0 30 36.70167441209213 38.0 35.0 41.0 31.0 41.0 31 36.56601952182474 38.0 35.0 41.0 31.0 41.0 32 36.45246990820857 38.0 35.0 41.0 31.0 41.0 33 36.35214322972902 38.0 35.0 41.0 31.0 41.0 34 36.216772321961216 38.0 35.0 41.0 30.0 41.0 35 36.12667690186925 38.0 35.0 41.0 30.0 41.0 36 36.01709416879407 38.0 35.0 41.0 30.0 41.0 37 35.93537623243967 38.0 35.0 41.0 30.0 41.0 38 35.87886174292287 38.0 35.0 41.0 30.0 41.0 39 35.81079863175654 38.0 35.0 41.0 29.0 41.0 40 35.68129570959634 38.0 35.0 41.0 29.0 41.0 41 35.6425863311729 38.0 35.0 40.0 29.0 41.0 42 35.56723039164934 38.0 35.0 40.0 29.0 41.0 43 35.46150015727503 38.0 35.0 40.0 28.0 41.0 44 35.33205738418592 37.0 34.0 40.0 28.0 41.0 45 35.2356403953273 37.0 34.0 40.0 28.0 41.0 46 35.21619351040825 37.0 34.0 40.0 28.0 41.0 47 35.16372675756079 37.0 34.0 40.0 28.0 41.0 48 35.10014228706489 37.0 34.0 40.0 28.0 41.0 49 35.03971613582646 36.0 34.0 40.0 27.0 41.0 50 34.93291998102839 36.0 34.0 40.0 27.0 41.0 51 34.57240321176319 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 1.0 13 0.0 14 9.0 15 24.0 16 59.0 17 152.0 18 338.0 19 635.0 20 1182.0 21 1937.0 22 3043.0 23 4319.0 24 6494.0 25 9339.0 26 12937.0 27 15409.0 28 16606.0 29 18033.0 30 21266.0 31 25462.0 32 32283.0 33 42727.0 34 78621.0 35 135948.0 36 66276.0 37 88279.0 38 138035.0 39 294514.0 40 216.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.262679867908695 22.88534107974485 29.940629908681878 14.911349143664577 2 30.914551835187602 24.987403206832933 30.63618982257996 13.461855135399503 3 28.980414081982197 24.790686162854104 32.476751397972876 13.752148357190821 4 25.7010078420584 27.45134581081441 32.24976260837926 14.597883738747933 5 24.042668370561664 32.05570790033397 29.72547372323736 14.176150005867 6 21.634240401046398 40.87829476397406 26.15666170683343 11.330803128146115 7 88.69394673553242 3.2251734709070776 6.594507502364055 1.4863722911964439 8 89.83845537185438 2.2889186676093307 6.140036898003938 1.7325890625323546 9 85.77780144298607 3.63004574287554 7.949044862332581 2.643107951805803 10 46.63968832920671 23.566603263629435 18.026380790950427 11.767327616213429 11 39.976058697604984 21.160048789771107 22.57266451510481 16.291227997519098 12 34.827199607157546 21.702376479938312 25.859959157794677 17.61046475510947 13 23.130374590665852 31.89517890404448 27.659698248873195 17.314748256416475 14 18.650057634642707 33.76423733442982 30.052842438029202 17.53286259289827 15 17.65414678542657 23.737978813722272 41.59742128113577 17.010453119715386 16 20.927735328310394 21.335467146281555 38.68807973597516 19.048717789432892 17 21.525774863012956 20.865416946458453 28.418759805038125 29.19004838549047 18 24.216016021346018 23.35302475873813 31.916576196547442 20.514383023368406 19 27.28421027720833 25.143297766497362 26.88771943317882 20.684772523115484 20 28.899755163699147 25.118153482680516 26.112683861412595 19.86940749220774 21 25.11430788633206 25.641647611243734 29.171214823886476 20.072829678537726 22 24.17499632696246 22.44546402050196 28.95300188237011 24.426537770165467 23 21.32580385289312 27.128315717543906 28.075318469610423 23.47056195995255 24 21.991683651383873 24.67088104584444 33.73189488308894 19.60554041968275 25 20.216793029018476 25.855620536273342 32.04338227101199 21.88420416369619 26 19.62624747694368 30.251235767595823 27.49769017706506 22.624826578395442 27 20.2338517000001 28.32488781212191 30.101553325109677 21.339707162768317 28 18.50924964526839 26.80153863295952 35.18030423597368 19.50890748579841 29 18.678455884600556 24.548413592901227 34.55199295565633 22.221137566841886 30 21.37057053859056 26.266902135489232 31.20297156132198 21.159555764598228 31 27.043613992843245 24.446850407288096 26.803806548754768 21.70572905111389 32 27.075266208942097 25.494134479518255 26.790297659017874 20.640301652521774 33 25.55191702977971 25.561876138271867 26.84038901658241 22.045817815366018 34 20.621073670779484 27.15148790066923 28.90517844060082 23.322259987950464 35 21.368598437899042 26.183580881272633 29.71847276578248 22.729347915045846 36 27.251276195659997 24.423974039266497 27.67153085302229 20.653218912051212 37 22.322109122247564 28.470527448190452 28.263161060477426 20.94420236908456 38 22.03073124507591 29.331645215141393 25.477568833709512 23.160054706073183 39 22.27034147909524 27.758697703587348 27.243486397928507 22.727474419388905 40 23.549939012786115 25.53288625810657 26.962264839318166 23.954909889789153 41 20.062870570045565 24.079743863562186 28.404560680059205 27.452824886333044 42 22.949730167322883 25.652001139874198 26.367775085860334 25.030493606942585 43 22.849448847159238 26.033109598509878 26.719795059296136 24.397646495034746 44 21.58641695927711 28.572090633803583 27.513072562458895 22.328419844460416 45 20.66160033999016 30.381394413235952 25.352044624694447 23.604960622079442 46 22.87962198773945 27.897730802339304 27.49009758940272 21.732549620518522 47 22.33196962570515 26.029165397126846 28.538860737151516 23.100004240016485 48 23.567589313975194 24.220650457971082 29.672522819670128 22.5392374083836 49 22.493583277374977 23.485155505069777 29.88314317352415 24.138118044031092 50 20.515664888817895 28.306251460587074 28.41728072951949 22.760802921075545 51 20.618904360018814 29.54305440927203 26.20931679529693 23.628724435412224 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 465.0 1 769.0 2 1073.0 3 5415.5 4 9758.0 5 6810.5 6 3863.0 7 3953.0 8 4043.0 9 4116.0 10 4189.0 11 4230.5 12 4272.0 13 4157.0 14 4042.0 15 3761.5 16 3481.0 17 3388.5 18 3296.0 19 3311.5 20 3327.0 21 3566.0 22 3805.0 23 4218.0 24 4631.0 25 5218.0 26 6830.0 27 7855.0 28 9776.5 29 11698.0 30 12677.5 31 13657.0 32 16297.0 33 18937.0 34 21672.5 35 24408.0 36 27095.5 37 29783.0 38 34609.5 39 39436.0 40 48704.0 41 57972.0 42 67822.0 43 77672.0 44 79638.0 45 81604.0 46 82757.0 47 83910.0 48 82162.0 49 80414.0 50 78261.5 51 76109.0 52 72171.5 53 68234.0 54 61921.5 55 55609.0 56 52686.0 57 49763.0 58 46092.0 59 42421.0 60 40984.5 61 39548.0 62 35720.5 63 31893.0 64 27512.0 65 23131.0 66 19408.5 67 15686.0 68 12859.5 69 10033.0 70 8625.0 71 7217.0 72 6114.0 73 5011.0 74 4210.0 75 2337.5 76 1266.0 77 1023.0 78 780.0 79 552.5 80 325.0 81 275.5 82 226.0 83 137.5 84 49.0 85 37.0 86 25.0 87 16.5 88 8.0 89 6.5 90 5.0 91 3.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1014147.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.294986590807476 #Duplication Level Percentage of deduplicated Percentage of total 1 77.10893203430358 17.96251537770587 2 5.739664369079005 2.674108090268618 3 2.1257219571958763 1.485559934659889 4 1.2629374238480797 1.1768044141427982 5 0.8883884202392115 1.0347498168450535 6 0.7301785503939552 1.0205699724193456 7 0.5998397782388847 0.9781281713495423 8 0.5163023404163832 0.9621804877441732 9 0.5027859881801047 1.0541153567431283 >10 9.601269555246063 57.10127976428957 >50 0.8826772697759042 12.433188399708026 >100 0.040450718998755866 1.4742515150426363 >500 4.2579704209216705E-4 0.07548310589702256 >1k 0.0 0.0 >5k 4.2579704209216705E-4 0.5670655931843337 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5717 0.5637249826701652 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.860503457585537E-5 0.0 0.0 0.028792670096149768 0.0 2 9.860503457585537E-5 0.0 0.0 0.10166179064770689 0.0 3 9.860503457585537E-5 0.0 0.0 0.16141644160067525 0.0 4 9.860503457585537E-5 0.0 0.0 0.27678433205442604 0.0 5 9.860503457585537E-5 0.0 0.0 0.5375946485075634 0.0 6 9.860503457585537E-5 0.0 0.0 0.8823178493847539 0.0 7 9.860503457585537E-5 0.0 0.0 1.1018126563506079 0.0 8 9.860503457585537E-5 0.0 0.0 1.6414780105842643 0.0 9 9.860503457585537E-5 0.0 0.0 1.9139237211173528 0.0 10 9.860503457585537E-5 0.0 0.0 2.301638717069616 0.0 11 9.860503457585537E-5 0.0 0.0 2.594101249621603 0.0 12 9.860503457585537E-5 0.0 0.0 2.8644762544285984 0.0 13 9.860503457585537E-5 0.0 0.0 2.9850702117148695 0.0 14 9.860503457585537E-5 0.0 0.0 3.0329922585187354 0.0 15 9.860503457585537E-5 0.0 0.0 3.093338539679159 0.0 16 9.860503457585537E-5 0.0 0.0 3.2196515889708297 0.0 17 9.860503457585537E-5 0.0 0.0 3.3625302840712443 0.0 18 9.860503457585537E-5 0.0 0.0 3.557768252531438 0.0 19 9.860503457585537E-5 0.0 0.0 3.6657407653919996 0.0 20 9.860503457585537E-5 0.0 0.0 3.788109613300636 0.0 21 9.860503457585537E-5 0.0 0.0 3.936510190337298 0.0 22 9.860503457585537E-5 0.0 0.0 4.089841019102753 0.0 23 9.860503457585537E-5 0.0 0.0 4.256877947674252 0.0 24 9.860503457585537E-5 0.0 0.0 4.38752961848726 0.0 25 9.860503457585537E-5 0.0 0.0 4.501221223353222 0.0 26 9.860503457585537E-5 0.0 0.0 4.612644912423939 0.0 27 9.860503457585537E-5 0.0 0.0 4.727716987773961 0.0 28 9.860503457585537E-5 0.0 0.0 4.846930474576171 0.0 29 9.860503457585537E-5 0.0 0.0 4.981329136703062 0.0 30 9.860503457585537E-5 0.0 0.0 5.167692652051429 0.0 31 9.860503457585537E-5 0.0 0.0 5.311261582393874 0.0 32 9.860503457585537E-5 0.0 0.0 5.449900261007526 0.0 33 9.860503457585537E-5 0.0 0.0 5.598103627975037 0.0 34 9.860503457585537E-5 0.0 0.0 5.7579423890224986 0.0 35 9.860503457585537E-5 0.0 0.0 5.931783064979732 0.0 36 9.860503457585537E-5 0.0 0.0 6.086987389402128 0.0 37 9.860503457585537E-5 0.0 0.0 6.250868956867199 0.0 38 9.860503457585537E-5 0.0 0.0 6.4449236649124835 0.0 39 9.860503457585537E-5 0.0 0.0 6.721412181863181 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCGA 25 3.8904796E-5 45.0 14 TCTAGCG 45 3.8380676E-10 45.0 1 GCGATCG 25 3.8904796E-5 45.0 9 TATTACG 30 2.1652486E-6 44.999996 1 AACGTAG 80 0.0 42.187504 1 CGTTTTT 3395 0.0 41.81885 1 CGTTAGG 140 0.0 40.17857 2 GGACGTA 40 3.4576806E-7 39.375004 8 TGCGAAG 115 0.0 39.130436 1 CGGGATA 185 0.0 38.91892 6 CTCGTAG 35 6.247563E-6 38.571426 1 ATAATCG 35 6.247563E-6 38.571426 29 TACGGGT 205 0.0 38.414635 4 GCGTTAG 95 0.0 37.894737 1 TACGGGA 340 0.0 37.72059 4 GGGCGAT 1260 0.0 37.67857 7 CATACGG 90 0.0 37.5 2 GGCGATA 210 0.0 37.5 8 GTTAGCG 60 1.546141E-10 37.499996 1 TAACGAC 30 1.1398272E-4 37.499996 29 >>END_MODULE