SRR1547056_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547056_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	951688
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8526	0.8958818436294248	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1195	0.1255663620850531	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTTAG	75	0.0	45.000004	1
GTAAGCG	30	2.1651067E-6	45.000004	1
GCGTATT	25	3.8902974E-5	45.000004	13
CGCCCTT	25	3.8902974E-5	45.000004	45
TGCGTAA	25	3.8902974E-5	45.000004	13
ATTTCGC	30	2.1651067E-6	45.000004	35
AAGTATC	20	7.032675E-4	45.0	23
CGTATCA	20	7.032675E-4	45.0	43
TTTCGCG	20	7.032675E-4	45.0	1
ACGATTG	20	7.032675E-4	45.0	16
CCGTACT	20	7.032675E-4	45.0	20
ACGGCCA	20	7.032675E-4	45.0	30
TCCACCG	20	7.032675E-4	45.0	31
ACGTCGG	20	7.032675E-4	45.0	2
CCAACGG	20	7.032675E-4	45.0	2
TAATGCG	55	1.8189894E-12	45.0	1
TTTAGCG	65	0.0	44.999996	1
CGTTTTT	4550	0.0	43.615383	1
CGACGGT	80	0.0	42.1875	28
GACGGTC	80	0.0	42.1875	29