SRR1547052_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547052_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1040833
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9936	0.9546200014795841	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAGACG	20	7.032979E-4	45.0	1
GATTCGC	20	7.032979E-4	45.0	10
TTACCCG	20	7.032979E-4	45.0	14
CGTTTTT	5780	0.0	43.170414	1
TTAACGG	80	0.0	42.1875	2
TATAGCG	80	0.0	42.1875	1
GCGATAT	105	0.0	40.714287	9
GCGATAC	50	1.0804797E-9	40.5	9
CGGGTAC	95	0.0	40.26316	6
GTGTACG	45	1.9279469E-8	40.0	1
AACGTAG	40	3.457808E-7	39.375	1
GTTTACG	80	0.0	39.375	1
TATTCCG	40	3.457808E-7	39.375	1
CACGACC	250	0.0	38.7	27
ATTAGCG	70	0.0	38.571426	1
ACGGGTA	70	0.0	38.571426	5
TAACGGG	325	0.0	38.07692	3
TACGGGT	95	0.0	37.894737	4
GTATGCG	95	0.0	37.894737	1
ATAGGGC	585	0.0	37.69231	4