##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547051_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 919336 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.692386679081423 31.0 31.0 33.0 30.0 34.0 2 32.09168029969456 33.0 31.0 34.0 30.0 34.0 3 32.16654411444782 33.0 31.0 34.0 30.0 34.0 4 35.83783839640784 37.0 35.0 37.0 35.0 37.0 5 35.77746765056519 37.0 35.0 37.0 35.0 37.0 6 35.8297314583569 37.0 35.0 37.0 35.0 37.0 7 36.13777117397774 37.0 35.0 37.0 35.0 37.0 8 36.09572887388289 37.0 35.0 37.0 35.0 37.0 9 37.903586936658634 39.0 38.0 39.0 35.0 39.0 10 37.4544725758591 39.0 37.0 39.0 35.0 39.0 11 37.107356831452265 39.0 37.0 39.0 33.0 39.0 12 36.323302905575325 38.0 35.0 39.0 33.0 39.0 13 35.97343843817712 38.0 35.0 39.0 32.0 39.0 14 36.959323903338934 39.0 35.0 41.0 31.0 41.0 15 37.216221272744676 39.0 35.0 41.0 32.0 41.0 16 37.378678742048606 39.0 35.0 41.0 33.0 41.0 17 37.3564387775525 39.0 35.0 41.0 33.0 41.0 18 37.267088420338155 39.0 35.0 41.0 33.0 41.0 19 37.184106790118086 38.0 35.0 41.0 32.0 41.0 20 36.99838905470905 38.0 35.0 41.0 32.0 41.0 21 36.91813330490702 38.0 35.0 41.0 32.0 41.0 22 36.84405701506304 38.0 35.0 41.0 32.0 41.0 23 36.82760274807035 38.0 35.0 41.0 32.0 41.0 24 36.7427099558812 38.0 35.0 41.0 32.0 41.0 25 36.64389407137325 38.0 35.0 41.0 32.0 41.0 26 36.50710512804894 38.0 35.0 41.0 31.0 41.0 27 36.418797915016924 38.0 35.0 40.0 31.0 41.0 28 36.44974851414499 38.0 35.0 41.0 31.0 41.0 29 36.46910705117607 38.0 35.0 41.0 31.0 41.0 30 36.43281237762907 38.0 35.0 40.0 31.0 41.0 31 36.27103474681727 38.0 35.0 40.0 31.0 41.0 32 36.15151478893462 38.0 35.0 41.0 31.0 41.0 33 36.009681987869506 38.0 35.0 41.0 30.0 41.0 34 35.867300965044336 38.0 35.0 41.0 30.0 41.0 35 35.773598553738786 38.0 35.0 41.0 30.0 41.0 36 35.64335346380431 38.0 35.0 41.0 29.0 41.0 37 35.54072069406615 37.0 35.0 40.0 29.0 41.0 38 35.48627705213328 37.0 35.0 40.0 29.0 41.0 39 35.41982039210909 37.0 35.0 40.0 29.0 41.0 40 35.28274646048887 37.0 35.0 40.0 28.0 41.0 41 35.25996480068223 37.0 34.0 40.0 28.0 41.0 42 35.16610684232968 36.0 34.0 40.0 28.0 41.0 43 35.04172141632657 36.0 34.0 40.0 27.0 41.0 44 34.8979317681457 36.0 34.0 40.0 27.0 41.0 45 34.81861147610884 36.0 34.0 40.0 27.0 41.0 46 34.80373008345153 36.0 34.0 40.0 27.0 41.0 47 34.750366568914956 35.0 34.0 40.0 27.0 41.0 48 34.677727185707944 35.0 34.0 40.0 27.0 41.0 49 34.611736079083165 36.0 34.0 40.0 27.0 41.0 50 34.51048909212736 35.0 34.0 40.0 26.0 41.0 51 34.150691368552955 35.0 34.0 39.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 0.0 12 4.0 13 6.0 14 17.0 15 31.0 16 63.0 17 172.0 18 356.0 19 671.0 20 1146.0 21 1908.0 22 2857.0 23 4188.0 24 6276.0 25 9179.0 26 12702.0 27 15101.0 28 16399.0 29 17504.0 30 20247.0 31 24564.0 32 30391.0 33 40854.0 34 80008.0 35 140329.0 36 59478.0 37 77226.0 38 118793.0 39 238658.0 40 205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.800055692369277 23.395254836099095 30.1716673773245 15.633022094207124 2 31.494469921769625 25.13716421417197 30.402486142172176 12.965879721886232 3 28.900641332439935 24.64235056606072 32.76941183636885 13.687596265130486 4 26.347820600955473 26.718305385626145 32.151030743928224 14.782843269490154 5 24.150582594394216 31.433121296239896 30.284357405779822 14.131938703586066 6 22.339275303044808 39.47011756311077 26.83034276912902 11.360264364715404 7 87.68709155303392 3.549953444660059 7.169631125072878 1.5933238772331333 8 89.4070285510412 2.4150038723600513 6.3872186012513374 1.7907489753474246 9 85.745146497037 3.737588868487691 7.907228695493269 2.610035938982048 10 53.05394328080266 22.015672180791356 13.297858454362713 11.632526084043265 11 44.03797958526589 20.222312625634153 21.324521176153226 14.415186612946734 12 38.7526432120574 20.411362113525414 24.026362505112388 16.809632169304802 13 24.146557950520812 32.10425785566974 25.66036791771452 18.08881627609492 14 17.81013688140136 34.52230740447453 29.74712183575972 17.920433878364385 15 16.7927721747 22.36984084165093 43.64215042160864 17.195236562040428 16 21.079888093145488 19.177428056771408 40.30158723252434 19.44109661755876 17 21.890364349922116 19.383446313426212 28.195458461324257 30.53073087532741 18 24.913524543801177 22.60772992681675 31.218183558568356 21.26056197081372 19 29.052163735565667 23.9092127361487 25.933608604471054 21.10501492381458 20 30.21528581497951 24.315157896568827 24.99347355047556 20.476082737976103 21 25.467620108426082 25.651122114221568 28.499373460845657 20.381884316506696 22 24.58350374618203 22.77078239076899 28.219715098723423 24.425998764325556 23 22.02818120904653 26.671423723208925 27.54292228303906 23.757472784705485 24 22.763494522133364 22.63144269342221 34.61922517991246 19.985837604531966 25 20.623145400593472 24.203881932177136 32.42666446217705 22.746308205052344 26 19.708463499743292 30.65843173768894 26.664244628732042 22.968860133835726 27 20.240369135985105 28.040672833436307 30.285989018160937 21.432969012417658 28 18.947153162717438 25.615226641837154 35.39978854303541 20.037831652410002 29 19.796135471688263 23.53481208176336 34.64217652740674 22.02687591914164 30 22.93633666037227 25.06667855930802 30.96289060800404 21.03409417231567 31 28.207532392944472 24.27882732754945 26.47367230261841 21.039967976887667 32 29.952813769938302 24.624402829868515 25.867582690115476 19.55520071007771 33 28.222216904374463 24.455367787185534 26.447566504520655 20.87484880391935 34 21.68043022355265 25.472623719728148 29.634758129780625 23.212187926938572 35 22.559325426177153 24.962472915234475 30.204517173264183 22.273684485324193 36 29.200640462246664 23.95587685024844 26.659676114064933 20.18380657343996 37 23.8661381692874 27.437085026584406 28.159998085574806 20.536778718553393 38 23.6711061026654 28.900641332439935 24.41762315410253 23.010629410792138 39 23.288547386374514 27.777221820966435 26.023129737114616 22.911101055544435 40 24.34648485428614 24.93832505199405 25.600650904565903 25.114539189153913 41 20.71897543444399 23.75214285092719 26.812068710460597 28.716813004168223 42 23.933143051071642 25.213088576972947 25.238650504277 25.61511786767841 43 23.674695649903843 25.125634153345462 26.416130772644603 24.783539424106095 44 22.821797471218357 27.35017447375062 27.647780572065056 22.180247482965967 45 20.68569054186935 30.417061879443423 24.677702167651436 24.219545411035792 46 23.51196950842782 27.866090308657554 26.61235935501275 22.009580827901875 47 23.36251381431816 25.190898648589855 28.250389411488293 23.196198125603694 48 24.562945430180044 22.590217287259502 29.21793555348643 23.628901729074027 49 22.979084904757347 22.09344570429092 30.442188710112518 24.485280680839214 50 21.012991985519985 28.427908838553044 27.002858584891705 23.55624059103527 51 20.956429422974843 29.845127352785056 25.218092188275016 23.98035103596509 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 488.0 1 927.0 2 1366.0 3 5677.0 4 9988.0 5 6930.5 6 3873.0 7 3880.5 8 3888.0 9 4026.0 10 4164.0 11 4131.5 12 4099.0 13 3882.5 14 3666.0 15 3525.0 16 3384.0 17 3181.5 18 2979.0 19 2789.5 20 2600.0 21 2764.5 22 2929.0 23 3062.0 24 3195.0 25 3429.0 26 4469.5 27 5276.0 28 5795.0 29 6314.0 30 7960.5 31 9607.0 32 11616.0 33 13625.0 34 15345.0 35 17065.0 36 18464.5 37 19864.0 38 24886.0 39 29908.0 40 39421.0 41 48934.0 42 59833.5 43 70733.0 44 72793.0 45 74853.0 46 74046.5 47 73240.0 48 71351.5 49 69463.0 50 70280.5 51 71098.0 52 66369.5 53 61641.0 54 59411.0 55 57181.0 56 52680.5 57 48180.0 58 45700.5 59 43221.0 60 41040.0 61 38859.0 62 34774.0 63 30689.0 64 27980.5 65 25272.0 66 21622.0 67 17972.0 68 15354.5 69 12737.0 70 10708.5 71 8680.0 72 7541.5 73 6403.0 74 5167.0 75 3071.5 76 2212.0 77 1668.0 78 1124.0 79 866.0 80 608.0 81 400.0 82 192.0 83 136.0 84 80.0 85 69.0 86 58.0 87 38.5 88 19.0 89 13.5 90 8.0 91 4.5 92 1.0 93 2.5 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 919336.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.978527174747242 #Duplication Level Percentage of deduplicated Percentage of total 1 78.0264092800235 17.929319659889707 2 5.745824863915326 2.6406118555363336 3 2.0343533179697517 1.4023932900001548 4 1.2496697430657386 1.1486228060198191 5 0.8003200745997625 0.9195088291343192 6 0.6244967769524754 0.8610009695846713 7 0.5453986695393683 0.8772720704356956 8 0.46002450918911614 0.8456548548361494 9 0.39861141127493765 0.8243552831530955 >10 8.947515101418116 54.726803720594084 >50 1.1273845696819595 15.809549474487087 >100 0.039039499456399354 1.2580862549018454 >500 4.76091456785358E-4 0.09156679959589954 >1k 0.0 0.0 >5k 4.76091456785358E-4 0.6652541318311411 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6081 0.661455659301931 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.263224762219689E-4 0.0 0.0 0.024256637399166354 0.0 2 3.263224762219689E-4 0.0 0.0 0.10115996762881035 0.0 3 3.263224762219689E-4 0.0 0.0 0.17403865398505008 0.0 4 3.263224762219689E-4 0.0 0.0 0.2815075228208185 0.0 5 3.263224762219689E-4 0.0 0.0 0.531361765448106 0.0 6 3.263224762219689E-4 0.0 0.0 0.874761784592358 0.0 7 3.263224762219689E-4 0.0 0.0 1.1052542269638086 0.0 8 3.263224762219689E-4 0.0 0.0 1.5987625851701663 0.0 9 3.263224762219689E-4 0.0 0.0 1.871676949450473 0.0 10 3.263224762219689E-4 0.0 0.0 2.2621761793294293 0.0 11 3.263224762219689E-4 0.0 0.0 2.6183027750463377 0.0 12 3.263224762219689E-4 0.0 0.0 2.9074244889790024 0.0 13 3.263224762219689E-4 0.0 0.0 3.0322972232132757 0.0 14 3.263224762219689E-4 0.0 0.0 3.08440004525005 0.0 15 3.263224762219689E-4 0.0 0.0 3.149882088811925 0.0 16 3.263224762219689E-4 0.0 0.0 3.26507392291828 0.0 17 3.263224762219689E-4 0.0 0.0 3.402455685407729 0.0 18 3.263224762219689E-4 0.0 0.0 3.5908525283465456 0.0 19 3.263224762219689E-4 0.0 0.0 3.700279332039646 0.0 20 3.263224762219689E-4 0.0 0.0 3.8250432921151787 0.0 21 3.263224762219689E-4 0.0 0.0 3.973411244637434 0.0 22 3.263224762219689E-4 0.0 0.0 4.112750941984214 0.0 23 3.263224762219689E-4 0.0 0.0 4.26449089342743 0.0 24 3.263224762219689E-4 0.0 0.0 4.385121435470818 0.0 25 3.263224762219689E-4 0.0 0.0 4.494439465005177 0.0 26 3.263224762219689E-4 0.0 0.0 4.5935327236179155 0.0 27 3.263224762219689E-4 0.0 0.0 4.708180686930567 0.0 28 3.263224762219689E-4 0.0 0.0 4.820435618750925 0.0 29 3.263224762219689E-4 0.0 0.0 4.952161124985859 0.0 30 3.263224762219689E-4 0.0 0.0 5.125112037383503 0.0 31 3.263224762219689E-4 0.0 0.0 5.270216765143538 0.0 32 3.263224762219689E-4 0.0 0.0 5.39139117798063 0.0 33 3.263224762219689E-4 0.0 0.0 5.51909204034216 0.0 34 3.263224762219689E-4 0.0 0.0 5.66158618829242 0.0 35 3.263224762219689E-4 0.0 0.0 5.827575554530661 0.0 36 3.263224762219689E-4 0.0 0.0 5.96669770355996 0.0 37 3.263224762219689E-4 0.0 0.0 6.119525396590583 0.0 38 4.3509663496262517E-4 0.0 0.0 6.316515398069911 0.0 39 5.438707937032815E-4 0.0 0.0 6.627065621274485 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTT 35 1.2115743E-7 45.000004 45 GTCGATC 20 7.0325495E-4 45.0 22 CGTATGA 20 7.0325495E-4 45.0 42 TTTCGTA 25 3.8901937E-5 45.0 32 CGCATAT 20 7.0325495E-4 45.0 11 ATGTACG 25 3.8901937E-5 45.0 1 TTATACG 55 1.8189894E-12 45.0 1 CGTAGAA 20 7.0325495E-4 45.0 22 ATACCGG 25 3.8901937E-5 45.0 2 ACGTTAG 30 2.1650267E-6 44.999996 1 TACGTAG 30 2.1650267E-6 44.999996 1 ACGGGAT 210 0.0 42.857143 5 CGTTTTT 3535 0.0 42.644978 1 CGTTAGG 160 0.0 42.1875 2 AAGTACG 65 0.0 41.538464 1 ATTAGCG 55 6.002665E-11 40.909092 1 TACGGGA 210 0.0 40.714287 4 GGGCGAT 1200 0.0 40.6875 7 CTAAGCG 50 1.0804797E-9 40.5 1 GTAACGA 45 1.927583E-8 40.0 10 >>END_MODULE