##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547050_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2280910 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39724057503365 31.0 31.0 33.0 30.0 34.0 2 31.79951203686248 31.0 31.0 34.0 30.0 34.0 3 31.76540503570943 31.0 31.0 34.0 30.0 34.0 4 35.61589058752866 37.0 35.0 37.0 33.0 37.0 5 35.54965781201363 37.0 35.0 37.0 33.0 37.0 6 35.62482693311003 37.0 35.0 37.0 33.0 37.0 7 36.037643747451675 37.0 35.0 37.0 35.0 37.0 8 36.04555199459865 37.0 35.0 37.0 35.0 37.0 9 37.848189538385995 39.0 38.0 39.0 35.0 39.0 10 37.176416868705914 39.0 37.0 39.0 33.0 39.0 11 36.93331608875405 39.0 37.0 39.0 33.0 39.0 12 36.56254696590396 39.0 35.0 39.0 32.0 39.0 13 36.42107448342986 39.0 35.0 39.0 32.0 39.0 14 37.43568838752954 40.0 36.0 41.0 32.0 41.0 15 37.64382592912478 40.0 36.0 41.0 32.0 41.0 16 37.718645189858435 40.0 36.0 41.0 33.0 41.0 17 37.66095724951883 40.0 36.0 41.0 33.0 41.0 18 37.459737560885785 39.0 36.0 41.0 32.0 41.0 19 37.31108241885914 39.0 36.0 41.0 32.0 41.0 20 37.06584608774568 39.0 35.0 41.0 32.0 41.0 21 36.972747280690605 38.0 35.0 41.0 32.0 41.0 22 36.90448680570474 38.0 35.0 41.0 32.0 41.0 23 36.840977943013975 38.0 35.0 41.0 32.0 41.0 24 36.73578396341811 38.0 35.0 41.0 31.0 41.0 25 36.67771021215217 38.0 35.0 40.0 31.0 41.0 26 36.57010228373763 38.0 35.0 40.0 31.0 41.0 27 36.4731550126923 38.0 35.0 40.0 31.0 41.0 28 36.369545926844985 38.0 35.0 40.0 31.0 41.0 29 36.337138247453865 38.0 35.0 40.0 31.0 41.0 30 36.2563310257748 38.0 35.0 40.0 30.0 41.0 31 36.07485345761122 38.0 35.0 40.0 30.0 41.0 32 35.82127528048016 38.0 35.0 40.0 29.0 41.0 33 35.5543471684547 38.0 35.0 40.0 27.0 41.0 34 35.29430183567085 38.0 34.0 40.0 25.0 41.0 35 35.11452315084769 38.0 34.0 41.0 24.0 41.0 36 34.98013950572359 38.0 34.0 40.0 24.0 41.0 37 34.92868372710892 38.0 34.0 40.0 23.0 41.0 38 34.849265424764674 38.0 34.0 40.0 23.0 41.0 39 34.7782051900338 38.0 34.0 40.0 23.0 41.0 40 34.665918865715874 38.0 34.0 40.0 23.0 41.0 41 34.593002792745004 38.0 34.0 40.0 22.0 41.0 42 34.53856881683188 38.0 34.0 40.0 22.0 41.0 43 34.45274780679641 38.0 34.0 40.0 22.0 41.0 44 34.32770823925539 37.0 34.0 40.0 22.0 41.0 45 34.24119057744497 37.0 33.0 40.0 22.0 41.0 46 34.211948739757375 37.0 33.0 40.0 22.0 41.0 47 34.17515377634365 37.0 33.0 40.0 22.0 41.0 48 34.048421463363304 37.0 33.0 40.0 21.0 41.0 49 33.97093133880776 37.0 33.0 40.0 20.0 41.0 50 33.89969354336646 36.0 33.0 40.0 20.0 41.0 51 33.58351885870113 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 4.0 13 10.0 14 18.0 15 55.0 16 160.0 17 422.0 18 1062.0 19 2088.0 20 3611.0 21 5898.0 22 9031.0 23 13778.0 24 21801.0 25 34177.0 26 46306.0 27 51081.0 28 50546.0 29 51069.0 30 55888.0 31 65397.0 32 79949.0 33 101632.0 34 161273.0 35 237623.0 36 172174.0 37 208857.0 38 308665.0 39 597945.0 40 386.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.13652884155885 23.443713254797427 28.318127414058424 19.101630489585297 2 35.146630073084864 24.02067595827981 28.695082225953676 12.13761174268165 3 26.14083852497468 23.717288275293633 37.60455256893082 12.537320630800863 4 24.437483285180036 25.479260470601645 36.82955487064373 13.253701373574584 5 22.059221977193314 29.68429267266135 34.968630941159454 13.287854408985888 6 19.75553616758224 38.53650516679746 31.573801684415432 10.13415698120487 7 82.68261351828875 3.3046459527118563 12.424821672051944 1.5879188569474463 8 83.9606998960941 2.3713342481728783 12.004638499546234 1.6633273561867852 9 80.44337567023689 4.09621598397131 13.188639621905294 2.271768723886519 10 37.99067039032667 28.30190581829182 21.286065649236487 12.42135814214502 11 29.655269168884345 25.5835171050151 29.821518604416656 14.939695121683888 12 28.29611865439671 22.487340578979442 31.85930176990762 17.357238996716223 13 22.681648990972903 26.846653309424745 32.901166639630674 17.570531059971678 14 16.619814021596643 30.22188512479668 34.43362517591663 18.724675677690044 15 16.51086627705609 28.362714881341216 39.32693530213818 15.799483539464513 16 20.581873024363084 26.82034801899242 37.51134415649894 15.086434800145557 17 21.150198824153517 26.50617516692899 31.751055499778598 20.592570509138895 18 21.38571885782429 27.68636202217536 34.09143718954277 16.83648193045758 19 23.038524097838142 28.820953040672364 30.960186942930672 17.18033591855882 20 24.469312686603153 29.53461557010141 30.426584126510907 15.56948761678453 21 22.79804990113595 27.815608682499526 33.86144126686278 15.524900149501732 22 21.964303720883333 22.84561863466774 34.86218219920996 20.327895445238962 23 19.008816656509904 27.27687633444546 34.31069178529622 19.403615223748417 24 18.37262320740406 27.153679890920728 37.26688032408118 17.20681657759403 25 19.630892933083725 28.143986391396414 34.15965557606394 18.065465099455917 26 19.250036169774347 32.329947257892684 30.256739634619517 18.16327693771346 27 18.30405408367713 31.508389195540374 33.096044999583505 17.091511721198994 28 17.044995199284497 29.136791894463176 36.14136463078333 17.676848275469002 29 18.086903911158267 28.418306728454873 35.402142127484204 18.092647232902657 30 20.282913398599682 28.09782060668768 34.33888228820953 17.280383706503105 31 23.56129790302993 26.896194939738965 31.83935359132978 17.703153565901328 32 23.563621537018122 28.146266183233887 31.362920939449605 16.92719134029839 33 23.023924661648202 28.31212103940971 30.787229658338124 17.876724640603967 34 19.12583135678304 29.332678623882575 31.416671416232994 20.124818603101392 35 19.339211104339935 29.73067766812369 31.84847275867965 19.081638468856728 36 23.152995953369487 29.73343972361908 29.60603443362518 17.50752988938625 37 19.334432309911396 31.513167989968917 30.036520511550215 19.115879188569473 38 19.96089280155727 32.33911026739328 28.35530555786945 19.344691373180005 39 19.545707634233704 30.478668601566916 29.387481312283253 20.588142451916124 40 21.640924017168587 28.90491075930221 29.55118790307377 19.90297732045543 41 19.41277823324901 27.97374732014854 30.012714223708958 22.600760222893495 42 20.39352714486762 28.585608375604473 29.448684954689135 21.57217952483877 43 20.41062558364863 28.371570995786772 29.63308504061975 21.58471837994485 44 19.987592671346086 29.44894800759346 30.69507345752353 19.868385863536922 45 19.686397095895934 31.5374565414681 28.351798185811806 20.42434817682416 46 21.45319192778321 30.353981524917685 28.534751480768637 19.658075066530465 47 20.483008974488254 29.437899785611883 29.35271448676186 20.726376753138002 48 20.427197916620997 29.407561017313267 30.918054636088225 19.247186429977507 49 21.19995966522134 27.547689299446276 31.021565953939433 20.230785081392952 50 19.405851173435167 30.31724180261387 30.056687900881666 20.220219123069302 51 19.05515780982152 31.40799067039033 29.13758105317614 20.39927046661201 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2159.0 1 3172.5 2 4186.0 3 35249.5 4 66313.0 5 43416.0 6 20519.0 7 20508.0 8 20497.0 9 22150.0 10 23803.0 11 25514.0 12 27225.0 13 27262.0 14 27299.0 15 26140.0 16 24981.0 17 23417.0 18 21853.0 19 20025.0 20 18197.0 21 17287.5 22 16378.0 23 16341.0 24 16304.0 25 17684.5 26 22622.5 27 26180.0 28 29725.5 29 33271.0 30 38403.0 31 43535.0 32 50677.5 33 57820.0 34 63216.5 35 68613.0 36 77487.0 37 86361.0 38 95572.5 39 104784.0 40 120739.5 41 136695.0 42 150280.5 43 163866.0 44 173048.0 45 182230.0 46 186414.0 47 190598.0 48 188043.5 49 185489.0 50 172466.0 51 159443.0 52 145854.5 53 132266.0 54 118120.0 55 103974.0 56 95862.0 57 87750.0 58 77292.0 59 66834.0 60 57329.0 61 47824.0 62 41001.5 63 34179.0 64 28413.0 65 22647.0 66 18117.0 67 13587.0 68 11788.0 69 9989.0 70 7951.5 71 5914.0 72 5043.5 73 4173.0 74 3138.5 75 1607.0 76 1110.0 77 807.0 78 504.0 79 366.5 80 229.0 81 175.0 82 121.0 83 71.5 84 22.0 85 12.5 86 3.0 87 3.0 88 3.0 89 2.5 90 2.0 91 3.5 92 5.0 93 5.0 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2280910.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.47078628401257 #Duplication Level Percentage of deduplicated Percentage of total 1 78.51359787965221 19.212894741018715 2 7.330040344373415 3.587437014407034 3 2.871856088572913 2.108297297457241 4 1.6836776598356387 1.648036647400173 5 1.1435139776091456 1.399134307942727 6 0.7974019168188908 1.1707831133362223 7 0.6159014599408905 1.0550115098757402 8 0.48712912259219554 0.953634612133774 9 0.4000331967811996 0.8810214178448772 >10 4.414758093249216 25.146114958092507 >50 1.2298430793323005 21.195925453581278 >100 0.5069887317168792 18.075941871104266 >500 0.0034451910682680308 0.6267081531613267 >1k 0.0016319326112848565 0.7338661954924373 >5k 0.0 0.0 >10k+ 1.813258456983174E-4 2.205192707151771 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49698 2.1788672065096826 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTT 3469 0.1520884208495732 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCT 3160 0.13854119627692457 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTC 2320 0.10171378967166614 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.384215072054575E-5 0.0 0.0 0.04857710299836469 0.0 2 4.384215072054575E-5 0.0 0.0 0.15445589698848267 0.0 3 4.384215072054575E-5 0.0 0.0 0.2543721584806064 0.0 4 4.384215072054575E-5 0.0 0.0 0.4036546816840647 0.0 5 4.384215072054575E-5 0.0 0.0 0.7938059809462013 0.0 6 4.384215072054575E-5 0.0 0.0 1.3668228908637343 0.0 7 8.76843014410915E-5 0.0 0.0 1.8016931838608274 0.0 8 8.76843014410915E-5 0.0 0.0 2.3367866334050884 0.0 9 8.76843014410915E-5 0.0 0.0 2.6428048454344975 0.0 10 8.76843014410915E-5 0.0 0.0 2.9836337251360203 0.0 11 8.76843014410915E-5 0.0 0.0 3.385929300147748 0.0 12 8.76843014410915E-5 0.0 0.0 3.6351719269940506 0.0 13 8.76843014410915E-5 0.0 0.0 3.7520551008150256 0.0 14 8.76843014410915E-5 0.0 0.0 3.812031163000732 0.0 15 8.76843014410915E-5 0.0 0.0 3.8801618652204604 0.0 16 8.76843014410915E-5 0.0 0.0 4.000727779701961 0.0 17 8.76843014410915E-5 0.0 0.0 4.1514570938791975 0.0 18 8.76843014410915E-5 0.0 0.0 4.3262119066512925 0.0 19 8.76843014410915E-5 0.0 0.0 4.455283198372579 0.0 20 8.76843014410915E-5 0.0 0.0 4.583346120627294 0.0 21 8.76843014410915E-5 0.0 0.0 4.751875347997071 0.0 22 8.76843014410915E-5 0.0 0.0 4.9318035345541915 0.0 23 8.76843014410915E-5 0.0 0.0 5.1265942102055755 0.0 24 8.76843014410915E-5 0.0 0.0 5.27635899706696 0.0 25 8.76843014410915E-5 0.0 0.0 5.407490869872112 0.0 26 8.76843014410915E-5 0.0 0.0 5.528100626504334 0.0 27 8.76843014410915E-5 0.0 0.0 5.668702403865124 0.0 28 8.76843014410915E-5 0.0 0.0 5.811101709405457 0.0 29 8.76843014410915E-5 0.0 0.0 5.977438829239207 0.0 30 8.76843014410915E-5 0.0 0.0 6.158682280317943 0.0 31 8.76843014410915E-5 0.0 0.0 6.32072286938108 0.0 32 8.76843014410915E-5 0.0 0.0 6.479913718647382 0.0 33 8.76843014410915E-5 0.0 0.0 6.6357725644589225 0.0 34 8.76843014410915E-5 0.0 0.0 6.802898843005642 0.0 35 8.76843014410915E-5 0.0 0.0 6.997514150054145 0.0 36 8.76843014410915E-5 0.0 0.0 7.171085224756785 0.0 37 8.76843014410915E-5 0.0 0.0 7.353863151110741 0.0 38 8.76843014410915E-5 0.0 0.0 7.572942378261308 0.0 39 8.76843014410915E-5 0.0 0.0 7.911447623974642 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTACG 20 7.034748E-4 45.000004 1 GCGTATA 20 7.034748E-4 45.000004 18 ACGTTAT 35 1.2126293E-7 45.0 41 CCTCGCG 25 3.892018E-5 45.0 34 CGTTTTT 20750 0.0 44.13253 1 TATTGCG 210 0.0 41.785713 1 TATAGCG 200 0.0 41.625 1 ATAACGG 155 0.0 40.64516 2 GATTACG 100 0.0 40.5 1 CACGACC 420 0.0 40.17857 27 TAGGGCG 460 0.0 40.108692 5 TACGGGT 320 0.0 40.07813 4 TGCGTTG 80 0.0 39.375004 1 AAACACG 430 0.0 38.72093 40 TGCGACA 35 6.2509953E-6 38.571426 30 CGGGATC 635 0.0 38.267715 6 ATTGCGG 590 0.0 38.135593 2 AGGGCGC 325 0.0 38.076923 6 ATAGGGC 1095 0.0 38.0137 4 CTAGCGG 160 0.0 37.968754 2 >>END_MODULE