##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547049_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1671999 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4644458519413 31.0 31.0 33.0 30.0 34.0 2 31.871074683657106 31.0 31.0 34.0 30.0 34.0 3 31.995137556900453 33.0 31.0 34.0 30.0 34.0 4 35.737763599140905 37.0 35.0 37.0 35.0 37.0 5 35.65645254572521 37.0 35.0 37.0 33.0 37.0 6 35.72229110184875 37.0 35.0 37.0 33.0 37.0 7 36.04878890477805 37.0 35.0 37.0 35.0 37.0 8 36.030388774155966 37.0 35.0 37.0 35.0 37.0 9 37.818986733843744 39.0 38.0 39.0 35.0 39.0 10 37.2143948650687 39.0 37.0 39.0 34.0 39.0 11 36.969538857379696 39.0 37.0 39.0 33.0 39.0 12 36.462017022737456 39.0 35.0 39.0 32.0 39.0 13 36.28630698941806 39.0 35.0 39.0 32.0 39.0 14 37.275263920612396 39.0 35.0 41.0 32.0 41.0 15 37.49118151386454 39.0 35.0 41.0 32.0 41.0 16 37.56171803930505 40.0 35.0 41.0 33.0 41.0 17 37.49922757130835 39.0 35.0 41.0 33.0 41.0 18 37.42617011134576 39.0 35.0 41.0 32.0 41.0 19 37.39369880005909 39.0 35.0 41.0 32.0 41.0 20 37.2398883013686 39.0 35.0 41.0 32.0 41.0 21 37.14196240547991 39.0 35.0 41.0 32.0 41.0 22 37.06481164163376 39.0 35.0 41.0 32.0 41.0 23 37.026571188140665 39.0 35.0 41.0 32.0 41.0 24 36.93666443580409 39.0 35.0 41.0 32.0 41.0 25 36.86649035077174 38.0 35.0 41.0 32.0 41.0 26 36.745667910088464 38.0 35.0 41.0 31.0 41.0 27 36.656109842170956 38.0 35.0 41.0 31.0 41.0 28 36.58679042272154 38.0 35.0 40.0 31.0 41.0 29 36.62399140190873 38.0 35.0 41.0 31.0 41.0 30 36.60263014511372 38.0 35.0 41.0 31.0 41.0 31 36.530427948820545 38.0 35.0 41.0 31.0 41.0 32 36.46940219461854 38.0 35.0 41.0 31.0 41.0 33 36.385148555710856 38.0 35.0 41.0 30.0 41.0 34 36.27192001909092 38.0 35.0 41.0 30.0 41.0 35 36.19847021439606 38.0 35.0 41.0 30.0 41.0 36 36.11090198020453 38.0 35.0 41.0 30.0 41.0 37 36.07449286751966 38.0 35.0 41.0 30.0 41.0 38 36.01038756602127 38.0 35.0 41.0 30.0 41.0 39 35.93037555644471 38.0 35.0 41.0 30.0 41.0 40 35.78562487178521 38.0 35.0 40.0 29.0 41.0 41 35.73763979523911 38.0 35.0 40.0 29.0 41.0 42 35.69572230605401 38.0 35.0 40.0 29.0 41.0 43 35.61420670706143 38.0 35.0 40.0 29.0 41.0 44 35.49312350067195 38.0 34.0 40.0 28.0 41.0 45 35.3762615886732 38.0 34.0 40.0 28.0 41.0 46 35.35448944646498 37.0 34.0 40.0 28.0 41.0 47 35.32173942687765 37.0 34.0 40.0 28.0 41.0 48 35.23287633545235 37.0 34.0 40.0 28.0 41.0 49 35.15319088109502 37.0 34.0 40.0 27.0 41.0 50 35.078635812581226 37.0 34.0 40.0 27.0 41.0 51 34.74666073364877 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 6.0 12 7.0 13 12.0 14 29.0 15 43.0 16 107.0 17 258.0 18 558.0 19 1075.0 20 1718.0 21 2899.0 22 4456.0 23 6739.0 24 10035.0 25 14716.0 26 19830.0 27 23886.0 28 26754.0 29 30672.0 30 36817.0 31 45625.0 32 57909.0 33 76872.0 34 132028.0 35 191211.0 36 120305.0 37 159253.0 38 241728.0 39 466085.0 40 362.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.57765285744788 23.70294479841196 27.467719777344364 13.251682566795795 2 32.05689716321601 24.667957337295057 29.615388525950078 13.659756973538858 3 29.829862338434417 25.27878306147312 31.219815322856054 13.67153927723641 4 27.14553058943217 26.526929740986688 30.991824755876053 15.335714913705093 5 23.90503822071664 30.795831815688885 29.43835492724577 15.860775036348706 6 23.042238661625994 40.70169898426973 26.073998848085434 10.182063506018842 7 86.9653032089134 4.137263239989976 6.743185851187709 2.1542476999089115 8 86.99855681731867 3.752813249290221 6.94611659456734 2.302513338823767 9 83.0810903595038 5.43511090616681 8.338581542213841 3.145217192115546 10 42.53740582380731 28.77537606182779 16.450847159597583 12.236370954767317 11 36.05295218478001 25.804979548432744 22.477405787922123 15.664662478865118 12 32.7396726911918 22.95288454119889 26.998999401315434 17.30844336629388 13 24.82962011340916 28.562576891493357 28.02956221863769 18.578240776459793 14 18.465680900526856 33.06359632990211 29.54559183348794 18.925130936083097 15 18.32477172534194 27.78817451445844 36.447031367841724 17.44002239235789 16 22.451987112432484 25.058507810112328 35.179147834418565 17.310357243036627 17 22.29612577519484 24.53512232961862 28.06975363023542 25.098998264951117 18 24.02549283821342 27.143676521337635 30.646370003809807 18.184460636639134 19 26.41389139586806 27.60940646495602 26.903903650660077 19.072798488515843 20 28.41042369044479 27.057312833321074 26.23865205661008 18.293611419624053 21 26.201750120663945 26.6212479792153 29.74726659525514 17.429735304865613 22 24.002825360541483 22.331592303583914 29.62627369992446 24.039308635950142 23 21.28302708315017 27.384645564979404 29.548103796712798 21.784223555157627 24 21.085299692164888 26.009106464776593 33.39236446911751 19.513229373941012 25 21.89570687542277 26.737456182689108 30.519635478250883 20.847201463637237 26 20.583804176916374 31.08865495732952 27.130877470620497 21.196663395133612 27 19.863528626512338 30.873104589177387 30.251991777507044 19.011375006803235 28 18.052702184630494 28.79307942169822 33.73668285686774 19.417535536803552 29 19.48212887687134 27.479741315634758 32.89302206520458 20.14510774228932 30 21.31131657375393 27.241403852514267 31.655640942368983 19.79163863136282 31 26.568795794734328 26.399896172186704 27.60880837847391 19.42249965460506 32 25.82800587799395 26.854441898589656 28.517481170742325 18.800071052674074 33 25.489548737768388 26.317719089544912 27.42465755063251 20.7680746220542 34 21.380933840271435 26.85432228129323 28.88931153666958 22.875432341765755 35 20.466040948589086 27.12310234635308 30.122506054130415 22.28835065092742 36 26.273580307165258 26.364070791908368 28.202588637911862 19.159760263014512 37 21.260299796830022 30.043738064436642 28.081715359877606 20.61424677885573 38 22.11951083702801 30.85767395793897 25.735182855970606 21.28763234906241 39 21.856771445437467 28.044992849876106 27.249717254615586 22.84851845007084 40 23.620707907121954 25.91018296063574 28.248940340275325 22.220168791966984 41 20.003540671974086 25.6359603085887 29.531716227103004 24.828782792334206 42 21.443673112244685 26.62459726351511 27.558329879383898 24.373399744856307 43 21.805156582031447 25.325433807077637 28.430399778947233 24.43900983194368 44 21.251986394728707 27.475913562149263 29.587099035346316 21.68500100777572 45 20.682428637816173 30.12334337520537 27.17376027138772 22.020467715590737 46 22.391640186387672 28.60097404364476 27.690327565985385 21.317058203982178 47 21.631412458978744 27.6597055381014 28.782612908261306 21.926269094658547 48 21.951687770148187 27.420889605795217 29.87154896623742 20.755873657819173 49 22.45049189622721 25.87256332091108 30.534647448951823 21.142297333909887 50 20.404557658228264 29.01981400706579 29.256297402091747 21.319330932614193 51 19.909282242393687 29.710005807419744 27.782492692878403 22.59821925730817 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1909.0 1 2936.5 2 3964.0 3 8848.5 4 13733.0 5 10059.5 6 6386.0 7 6746.0 8 7106.0 9 7373.0 10 7640.0 11 7393.0 12 7146.0 13 7068.5 14 6991.0 15 6636.5 16 6282.0 17 6186.0 18 6090.0 19 5933.5 20 5777.0 21 6688.5 22 7600.0 23 8462.5 24 9325.0 25 11684.5 26 16481.5 27 18919.0 28 21497.0 29 24075.0 30 27959.5 31 31844.0 32 33987.0 33 36130.0 34 41494.5 35 46859.0 36 51931.0 37 57003.0 38 65431.0 39 73859.0 40 85862.5 41 97866.0 42 112781.0 43 127696.0 44 130854.5 45 134013.0 46 138180.5 47 142348.0 48 141437.0 49 140526.0 50 132900.0 51 125274.0 52 114311.0 53 103348.0 54 94448.5 55 85549.0 56 79771.0 57 73993.0 58 69902.0 59 65811.0 60 59328.5 61 52846.0 62 47007.0 63 41168.0 64 36045.5 65 30923.0 66 25031.0 67 19139.0 68 17158.5 69 15178.0 70 12405.5 71 9633.0 72 8063.5 73 6494.0 74 5312.0 75 2997.5 76 1865.0 77 1278.5 78 692.0 79 579.0 80 466.0 81 342.5 82 219.0 83 138.5 84 58.0 85 41.5 86 25.0 87 20.0 88 15.0 89 9.0 90 3.0 91 8.0 92 13.0 93 11.5 94 10.0 95 12.5 96 15.0 97 8.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1671999.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.2335471566069 #Duplication Level Percentage of deduplicated Percentage of total 1 79.40930828431961 16.86141292128635 2 7.050085367415206 2.9939664021423007 3 2.211940818268902 1.4090204901700916 4 1.2155576347649795 1.0324240143742296 5 0.7880638371813407 0.8366695324603289 6 0.5609053718554613 0.7146006398212238 7 0.4442614516147237 0.6603272537906709 8 0.36154775181472115 0.6141552990018472 9 0.31287376713003884 0.5979077899578833 >10 5.220068621827096 28.247333600912906 >50 1.7714731451829377 26.636837682182247 >100 0.6468246820535977 17.728492521136072 >500 0.005671413257159832 0.8517605140049188 >1k 0.0011342826514319664 0.34868833144369327 >5k 2.835706628579916E-4 0.4664030073152907 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7746 0.4632777890417399 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1732 0.10358857870130306 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1672 0.1000000598086482 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.19617296421828E-4 0.0 0.0 0.0666268341069582 0.0 2 1.19617296421828E-4 0.0 0.0 0.19324174236946315 0.0 3 1.19617296421828E-4 0.0 0.0 0.27272743584176784 0.0 4 1.19617296421828E-4 0.0 0.0 0.3965911462865708 0.0 5 1.19617296421828E-4 0.0 0.0 0.7092109504850183 0.0 6 1.19617296421828E-4 0.0 0.0 0.9974288262134128 0.0 7 1.19617296421828E-4 0.0 0.0 1.1779911351621621 0.0 8 1.19617296421828E-4 0.0 0.0 1.5495822664965708 0.0 9 1.19617296421828E-4 0.0 0.0 1.6880392871048369 0.0 10 1.19617296421828E-4 0.0 0.0 1.9474293943955707 0.0 11 1.19617296421828E-4 0.0 0.0 2.3311616813167952 0.0 12 1.19617296421828E-4 0.0 0.0 2.6233867364753207 0.0 13 1.19617296421828E-4 0.0 0.0 2.7480877679950764 0.0 14 1.19617296421828E-4 0.0 0.0 2.805504070277554 0.0 15 1.19617296421828E-4 0.0 0.0 2.8948581907046593 0.0 16 1.19617296421828E-4 0.0 0.0 3.068363079164521 0.0 17 1.19617296421828E-4 0.0 0.0 3.2571789815663768 0.0 18 1.19617296421828E-4 0.0 0.0 3.495456636038658 0.0 19 1.19617296421828E-4 0.0 0.0 3.6369040890574693 0.0 20 1.19617296421828E-4 0.0 0.0 3.792466383054057 0.0 21 1.19617296421828E-4 0.0 0.0 3.9909712864660802 0.0 22 1.79425944632742E-4 0.0 0.0 4.18792116502462 0.0 23 1.79425944632742E-4 0.0 0.0 4.393064828388055 0.0 24 1.79425944632742E-4 0.0 0.0 4.558794592580498 0.0 25 1.79425944632742E-4 0.0 0.0 4.699703767765412 0.0 26 4.1866053747639803E-4 0.0 0.0 4.838758874855786 0.0 27 4.1866053747639803E-4 0.0 0.0 4.9966537061326 0.0 28 4.1866053747639803E-4 0.0 0.0 5.155445667132576 0.0 29 4.1866053747639803E-4 0.0 0.0 5.342586927384526 0.0 30 4.1866053747639803E-4 0.0 0.0 5.542168386464346 0.0 31 4.1866053747639803E-4 0.0 0.0 5.720099114891815 0.0 32 4.1866053747639803E-4 0.0 0.0 5.892706873628513 0.0 33 4.1866053747639803E-4 0.0 0.0 6.069680663684608 0.0 34 4.1866053747639803E-4 0.0 0.0 6.245757324017538 0.0 35 4.1866053747639803E-4 0.0 0.0 6.461666544058938 0.0 36 4.1866053747639803E-4 0.0 0.0 6.651917854017856 0.0 37 4.1866053747639803E-4 0.0 0.0 6.852934720654737 0.0 38 4.1866053747639803E-4 0.0 0.0 7.077217151445665 0.0 39 4.1866053747639803E-4 0.0 0.0 7.426140805108137 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTACGT 20 7.034207E-4 45.000004 22 TAGGTCG 50 2.1827873E-11 45.0 1 CGTAAGA 25 3.8915692E-5 45.0 33 CGGTCTA 355 0.0 42.46479 31 GGCGATA 240 0.0 42.187496 8 GCGATAT 125 0.0 41.4 9 ACGGGTA 215 0.0 40.813953 5 CGTTTTT 4275 0.0 40.473682 1 CGACGGT 360 0.0 40.0 28 TAAAGCG 80 0.0 39.375004 1 CTAAGCG 80 0.0 39.375004 1 TCGACGT 180 0.0 38.75 26 ACGGGTC 135 0.0 38.333332 5 TAGGGTA 825 0.0 38.18182 5 CGTAAGG 195 0.0 38.076927 2 TTACGCG 65 9.094947E-12 38.07692 1 CGGGTAC 185 0.0 37.7027 6 CGACGTT 185 0.0 37.7027 27 AGGGTAA 880 0.0 37.585228 6 GTTAGCG 150 0.0 37.5 1 >>END_MODULE